RNA–Protein interactions for RNA: ENST00000555616.5

ACTN1-215, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 919 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-215ENST00000555616 ZNF677Q86XU0 584 aa10.1□□□□□ -0.79
ACTN1-215ENST00000555616 CCDC170Q8IYT3 715 aa10.1□□□□□ -0.79
ACTN1-215ENST00000555616 ANKRD52Q8NB46 1076 aa10.1□□□□□ -0.79
ACTN1-215ENST00000555616 OTUB2Q96DC9 234 aa10.1□□□□□ -0.79
ACTN1-215ENST00000555616 NACA2Q9H009 215 aa10.1□□□□□ -0.79
ACTN1-215ENST00000555616 PDCL3Q9H2J4 239 aa10.1□□□□□ -0.79
ACTN1-215ENST00000555616 LINC00597Q9H2U6 94 aa10.1□□□□□ -0.79
ACTN1-215ENST00000555616 NHEJ1Q9H9Q4 299 aaPredicted RBP10.1□□□□□ -0.79
ACTN1-215ENST00000555616 NMUR1Q9HB89 426 aa10.1□□□□□ -0.79
ACTN1-215ENST00000555616 FBRSL1Q9HCM7 1045 aaKnown RBP10.1□□□□□ -0.79
ACTN1-215ENST00000555616 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.1□□□□□ -0.79
ACTN1-215ENST00000555616 OSER1Q9NX31 292 aa10.1□□□□□ -0.79
ACTN1-215ENST00000555616 CLIC5Q9NZA1 410 aa10.1□□□□□ -0.79
ACTN1-215ENST00000555616 TBC1D14Q9P2M4 693 aa10.1□□□□□ -0.79
ACTN1-215ENST00000555616 TSPAN16Q9UKR8 245 aa10.1□□□□□ -0.79
ACTN1-215ENST00000555616 KIAA1257Q9ULG3 409 aa10.1□□□□□ -0.79
ACTN1-215ENST00000555616 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.1□□□□□ -0.79
ACTN1-215ENST00000555616 GPR179Q6PRD1 2367 aa10.1□□□□□ -0.79
ACTN1-215ENST00000555616 RIF1Q5UIP0 2472 aaKnown RBP10.1□□□□□ -0.79
ACTN1-215ENST00000555616 ZNF638Q14966 1978 aaKnown RBP10.1□□□□□ -0.79
ACTN1-215ENST00000555616 CACNA1IQ9P0X4 2223 aa10.09□□□□□ -0.79
ACTN1-215ENST00000555616 OTOGLQ3ZCN5 2332 aa10.09□□□□□ -0.79
ACTN1-215ENST00000555616 A0A1W2PQH9 124 aa10.09□□□□□ -0.79
ACTN1-215ENST00000555616 CHURC1-FNTBB4DL54 471 aa10.09□□□□□ -0.79
ACTN1-215ENST00000555616 K7ESF4 209 aa10.09□□□□□ -0.79
ACTN1-215ENST00000555616 SCAMP3O14828 347 aaKnown RBP10.09□□□□□ -0.79
ACTN1-215ENST00000555616 XPO1O14980 1071 aaKnown RBP10.09□□□□□ -0.79
ACTN1-215ENST00000555616 THAP12O43422 761 aa10.09□□□□□ -0.79
ACTN1-215ENST00000555616 MED7O43513 233 aa10.09□□□□□ -0.79
ACTN1-215ENST00000555616 GREM1O60565 184 aa10.09□□□□□ -0.79
ACTN1-215ENST00000555616 ADH1CP00326 375 aa10.09□□□□□ -0.79
ACTN1-215ENST00000555616 EGFP01133 1207 aa10.09□□□□□ -0.79
ACTN1-215ENST00000555616 LMNAP02545 664 aaKnown RBP10.09□□□□□ -0.79
ACTN1-215ENST00000555616 SETSIPP0DME0 302 aa10.09□□□□□ -0.79
ACTN1-215ENST00000555616 VDRP11473 427 aa10.09□□□□□ -0.79
ACTN1-215ENST00000555616 CD19P15391 556 aa10.09□□□□□ -0.79
ACTN1-215ENST00000555616 MSNP26038 577 aaKnown RBP10.09□□□□□ -0.79
ACTN1-215ENST00000555616 HOXA6P31267 233 aa10.09□□□□□ -0.79
ACTN1-215ENST00000555616 CLCN1P35523 988 aa10.09□□□□□ -0.79
ACTN1-215ENST00000555616 EIF4A3P38919 411 aaKnown RBP10.09□□□□□ -0.79
ACTN1-215ENST00000555616 OPRD1P41143 372 aa10.09□□□□□ -0.79
ACTN1-215ENST00000555616 EIF2DP41214 584 aaKnown RBP10.09□□□□□ -0.79
ACTN1-215ENST00000555616 NRLP54845 237 aa10.09□□□□□ -0.79
ACTN1-215ENST00000555616 SLC8A3P57103 927 aa10.09□□□□□ -0.79
ACTN1-215ENST00000555616 CCZ1BP86790 482 aa10.09□□□□□ -0.79
ACTN1-215ENST00000555616 CCZ1P86791 482 aaPredicted RBP10.09□□□□□ -0.79
ACTN1-215ENST00000555616 CDR2Q01850 454 aa10.09□□□□□ -0.79
ACTN1-215ENST00000555616 BST2Q10589 180 aaKnown RBP10.09□□□□□ -0.79
ACTN1-215ENST00000555616 MAPK8IP2Q13387 824 aaPredicted RBP10.09□□□□□ -0.79
ACTN1-215ENST00000555616 DHCR24Q15392 516 aa10.09□□□□□ -0.79
ACTN1-215ENST00000555616 STILQ15468 1287 aa10.09□□□□□ -0.79
ACTN1-215ENST00000555616 FBXO43Q4G163 708 aa10.09□□□□□ -0.79
ACTN1-215ENST00000555616 PKDCCQ504Y2 493 aa10.09□□□□□ -0.79
ACTN1-215ENST00000555616 PKN3Q6P5Z2 889 aa10.09□□□□□ -0.79
ACTN1-215ENST00000555616 SLC47A2Q86VL8 602 aa10.09□□□□□ -0.79
ACTN1-215ENST00000555616 ZNF276Q8N554 614 aa10.09□□□□□ -0.79
ACTN1-215ENST00000555616 EPS8L1Q8TE68 723 aa10.09□□□□□ -0.79
ACTN1-215ENST00000555616 EZH1Q92800 747 aaPredicted RBP10.09□□□□□ -0.79
ACTN1-215ENST00000555616 CD101Q93033 1021 aa10.09□□□□□ -0.79
ACTN1-215ENST00000555616 CHP1Q99653 195 aa10.09□□□□□ -0.79
ACTN1-215ENST00000555616 AGPAT1Q99943 283 aa10.09□□□□□ -0.79
ACTN1-215ENST00000555616 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.09□□□□□ -0.79
ACTN1-215ENST00000555616 KLF16Q9BXK1 252 aaPredicted RBP10.09□□□□□ -0.79
ACTN1-215ENST00000555616 EPC1Q9H2F5 836 aa10.09□□□□□ -0.79
ACTN1-215ENST00000555616 HAUS4Q9H6D7 363 aa10.09□□□□□ -0.79
ACTN1-215ENST00000555616 LUC7LQ9NQ29 371 aaKnown RBP10.09□□□□□ -0.79
ACTN1-215ENST00000555616 C2orf42Q9NWW7 574 aa10.09□□□□□ -0.79
ACTN1-215ENST00000555616 ARHGAP20Q9P2F6 1191 aa10.09□□□□□ -0.79
ACTN1-215ENST00000555616 HESX1Q9UBX0 185 aa10.09□□□□□ -0.79
ACTN1-215ENST00000555616 NOCTQ9UK39 431 aaKnown RBP10.09□□□□□ -0.79
ACTN1-215ENST00000555616 FANCMQ8IYD8 2048 aa10.09□□□□□ -0.79
ACTN1-215ENST00000555616 MYO16Q9Y6X6 1858 aa10.08□□□□□ -0.8
ACTN1-215ENST00000555616 FRYLO94915 3013 aa10.08□□□□□ -0.8
ACTN1-215ENST00000555616 SOWAHDA6NJG2 315 aa10.08□□□□□ -0.8
ACTN1-215ENST00000555616 HOXC11O43248 304 aaPredicted RBP10.08□□□□□ -0.8
ACTN1-215ENST00000555616 RNF40O75150 1001 aa10.08□□□□□ -0.8
ACTN1-215ENST00000555616 TBX18O95935 607 aa10.08□□□□□ -0.8
ACTN1-215ENST00000555616 PLEKP08567 350 aaPredicted RBP10.08□□□□□ -0.8
ACTN1-215ENST00000555616 ADH5P11766 374 aa10.08□□□□□ -0.8
ACTN1-215ENST00000555616 RARGP13631 454 aa10.08□□□□□ -0.8
ACTN1-215ENST00000555616 TNFAIP3P21580 790 aa10.08□□□□□ -0.8
ACTN1-215ENST00000555616 ATP5C1P36542 298 aaKnown RBP10.08□□□□□ -0.8
ACTN1-215ENST00000555616 PLA2G4AP47712 749 aa10.08□□□□□ -0.8
ACTN1-215ENST00000555616 GALK1P51570 392 aa10.08□□□□□ -0.8
ACTN1-215ENST00000555616 TKTL1P51854 596 aa10.08□□□□□ -0.8
ACTN1-215ENST00000555616 PDE4CQ08493 712 aa10.08□□□□□ -0.8
ACTN1-215ENST00000555616 SPA17Q15506 151 aa10.08□□□□□ -0.8
ACTN1-215ENST00000555616 PM20D1Q6GTS8 502 aa10.08□□□□□ -0.8
ACTN1-215ENST00000555616 RHBDF2Q6PJF5 856 aa10.08□□□□□ -0.8
ACTN1-215ENST00000555616 LCLAT1Q6UWP7 414 aa10.08□□□□□ -0.8
ACTN1-215ENST00000555616 TRIM72Q6ZMU5 477 aa10.08□□□□□ -0.8
ACTN1-215ENST00000555616 HTR3DQ70Z44 454 aa10.08□□□□□ -0.8
ACTN1-215ENST00000555616 BHLHA9Q7RTU4 235 aa10.08□□□□□ -0.8
ACTN1-215ENST00000555616 ZNF571Q7Z3V5 609 aaPredicted RBP10.08□□□□□ -0.8
ACTN1-215ENST00000555616 TADA2BQ86TJ2 420 aa10.08□□□□□ -0.8
ACTN1-215ENST00000555616 NOP9Q86U38 636 aaKnown RBP10.08□□□□□ -0.8
ACTN1-215ENST00000555616 TMEM139Q8IV31 216 aa10.08□□□□□ -0.8
ACTN1-215ENST00000555616 BBS7Q8IWZ6 715 aa10.08□□□□□ -0.8
ACTN1-215ENST00000555616 ADGRG2Q8IZP9 1017 aa10.08□□□□□ -0.8
ACTN1-215ENST00000555616 ARHGAP18Q8N392 663 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms