RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 TMEM196Q5HYL7 178 aa19.29■□□□□ 0.68
PRPF40B-216ENST00000552301 EFHC1Q5JVL4 640 aa19.29■□□□□ 0.68
PRPF40B-216ENST00000552301 RHBDF2Q6PJF5 856 aa19.29■□□□□ 0.68
PRPF40B-216ENST00000552301 TRIM72Q6ZMU5 477 aa19.29■□□□□ 0.68
PRPF40B-216ENST00000552301 Q6ZNB5 142 aa19.29■□□□□ 0.68
PRPF40B-216ENST00000552301 SLC20A1Q8WUM9 679 aa19.29■□□□□ 0.68
PRPF40B-216ENST00000552301 DDX1Q92499 740 aaKnown RBP19.29■□□□□ 0.68
PRPF40B-216ENST00000552301 CHFRQ96EP1 664 aa19.29■□□□□ 0.68
PRPF40B-216ENST00000552301 SERPINB11Q96P15 392 aa19.29■□□□□ 0.68
PRPF40B-216ENST00000552301 RBM12Q9NTZ6 932 aaKnown RBP19.29■□□□□ 0.68
PRPF40B-216ENST00000552301 TJP2Q9UDY2 1190 aa19.29■□□□□ 0.68
PRPF40B-216ENST00000552301 NOCTQ9UK39 431 aaKnown RBP19.29■□□□□ 0.68
PRPF40B-216ENST00000552301 ARIH1Q9Y4X5 557 aaPredicted RBP19.29■□□□□ 0.68
PRPF40B-216ENST00000552301 GREM1O60565 184 aa19.28■□□□□ 0.68
PRPF40B-216ENST00000552301 HSF2BPO75031 334 aa19.28■□□□□ 0.68
PRPF40B-216ENST00000552301 ERBB2P04626 1255 aa19.28■□□□□ 0.68
PRPF40B-216ENST00000552301 GLI1P08151 1106 aa19.28■□□□□ 0.68
PRPF40B-216ENST00000552301 FERP16591 822 aa19.28■□□□□ 0.68
PRPF40B-216ENST00000552301 CHKAP35790 457 aa19.28■□□□□ 0.68
PRPF40B-216ENST00000552301 GALK1P51570 392 aa19.28■□□□□ 0.68
PRPF40B-216ENST00000552301 YWHAZP63104 245 aaKnown RBP19.28■□□□□ 0.68
PRPF40B-216ENST00000552301 ANGPT1Q15389 498 aa19.28■□□□□ 0.68
PRPF40B-216ENST00000552301 TRIP4Q15650 581 aaPredicted RBP19.28■□□□□ 0.68
PRPF40B-216ENST00000552301 NAA35Q5VZE5 725 aa19.28■□□□□ 0.68
PRPF40B-216ENST00000552301 FSTL4Q6MZW2 842 aa19.28■□□□□ 0.68
PRPF40B-216ENST00000552301 TPGS1Q6ZTW0 290 aa19.28■□□□□ 0.68
PRPF40B-216ENST00000552301 FAM183BPQ6ZVS7 135 aa19.28■□□□□ 0.68
PRPF40B-216ENST00000552301 BEND5Q7L4P6 421 aa19.28■□□□□ 0.68
PRPF40B-216ENST00000552301 ERICH1Q86X53 443 aa19.28■□□□□ 0.68
PRPF40B-216ENST00000552301 ZDHHC17Q8IUH5 632 aa19.28■□□□□ 0.68
PRPF40B-216ENST00000552301 DENND1CQ8IV53 801 aa19.28■□□□□ 0.68
PRPF40B-216ENST00000552301 C1orf210Q8IVY1 113 aa19.28■□□□□ 0.68
PRPF40B-216ENST00000552301 ZNF687Q8N1G0 1237 aa19.28■□□□□ 0.68
PRPF40B-216ENST00000552301 SYNPOQ8N3V7 929 aa19.28■□□□□ 0.68
PRPF40B-216ENST00000552301 DQX1Q8TE96 717 aaKnown RBP19.28■□□□□ 0.68
PRPF40B-216ENST00000552301 BBS2Q9BXC9 721 aa19.28■□□□□ 0.68
PRPF40B-216ENST00000552301 SEPT11Q9NVA2 429 aaKnown RBP19.28■□□□□ 0.68
PRPF40B-216ENST00000552301 ASNSD1Q9NWL6 643 aa19.28■□□□□ 0.68
PRPF40B-216ENST00000552301 MYO6Q9UM54 1294 aa19.28■□□□□ 0.68
PRPF40B-216ENST00000552301 NAALADL1Q9UQQ1 740 aa19.28■□□□□ 0.68
PRPF40B-216ENST00000552301 MYOFQ9NZM1 2061 aa19.28■□□□□ 0.68
PRPF40B-216ENST00000552301 HOXC11O43248 304 aaPredicted RBP19.27■□□□□ 0.68
PRPF40B-216ENST00000552301 OPRD1P41143 372 aa19.27■□□□□ 0.68
PRPF40B-216ENST00000552301 EIF2DP41214 584 aaKnown RBP19.27■□□□□ 0.68
PRPF40B-216ENST00000552301 TBX4P57082 545 aa19.27■□□□□ 0.68
PRPF40B-216ENST00000552301 CCINQ13939 588 aa19.27■□□□□ 0.68
PRPF40B-216ENST00000552301 NR1I3Q14994 352 aa19.27■□□□□ 0.68
PRPF40B-216ENST00000552301 FBXO43Q4G163 708 aa19.27■□□□□ 0.68
PRPF40B-216ENST00000552301 PREPLQ4J6C6 727 aaPredicted RBP19.27■□□□□ 0.68
PRPF40B-216ENST00000552301 NUGGCQ68CJ6 796 aa19.27■□□□□ 0.68
PRPF40B-216ENST00000552301 NAIF1Q69YI7 327 aaPredicted RBP19.27■□□□□ 0.68
PRPF40B-216ENST00000552301 UNC45BQ8IWX7 931 aa19.27■□□□□ 0.68
PRPF40B-216ENST00000552301 CCDC26Q8TAB7 109 aa19.27■□□□□ 0.68
PRPF40B-216ENST00000552301 C18orf8Q96DM3 657 aa19.27■□□□□ 0.68
PRPF40B-216ENST00000552301 XPO6Q96QU8 1125 aaKnown RBP19.27■□□□□ 0.68
PRPF40B-216ENST00000552301 FAM204AQ9H8W3 233 aa19.27■□□□□ 0.68
PRPF40B-216ENST00000552301 WDR35Q9P2L0 1181 aa19.27■□□□□ 0.68
PRPF40B-216ENST00000552301 AGO1Q9UL18 857 aaKnown RBP19.27■□□□□ 0.68
PRPF40B-216ENST00000552301 FAM170AA1A519 330 aa19.26■□□□□ 0.67
PRPF40B-216ENST00000552301 NEDD8-MDP1E9PL57 170 aa19.26■□□□□ 0.67
PRPF40B-216ENST00000552301 EGFP01133 1207 aa19.26■□□□□ 0.67
PRPF40B-216ENST00000552301 KLKB1P03952 638 aa19.26■□□□□ 0.67
PRPF40B-216ENST00000552301 CYBBP04839 570 aa19.26■□□□□ 0.67
PRPF40B-216ENST00000552301 APODP05090 189 aa19.26■□□□□ 0.67
PRPF40B-216ENST00000552301 NOMO3P69849 1222 aa19.26■□□□□ 0.67
PRPF40B-216ENST00000552301 CDK17Q00537 523 aa19.26■□□□□ 0.67
PRPF40B-216ENST00000552301 FMO1Q01740 532 aa19.26■□□□□ 0.67
PRPF40B-216ENST00000552301 SLC6A3Q01959 620 aa19.26■□□□□ 0.67
PRPF40B-216ENST00000552301 KDSRQ06136 332 aa19.26■□□□□ 0.67
PRPF40B-216ENST00000552301 MTAPQ13126 283 aa19.26■□□□□ 0.67
PRPF40B-216ENST00000552301 NNTQ13423 1086 aa19.26■□□□□ 0.67
PRPF40B-216ENST00000552301 FZD5Q13467 585 aa19.26■□□□□ 0.67
PRPF40B-216ENST00000552301 PPP2R5DQ14738 602 aa19.26■□□□□ 0.67
PRPF40B-216ENST00000552301 DCAF6Q58WW2 860 aa19.26■□□□□ 0.67
PRPF40B-216ENST00000552301 OLFML1Q6UWY5 402 aa19.26■□□□□ 0.67
PRPF40B-216ENST00000552301 TMEM25Q86YD3 366 aa19.26■□□□□ 0.67
PRPF40B-216ENST00000552301 CPA5Q8WXQ8 436 aa19.26■□□□□ 0.67
PRPF40B-216ENST00000552301 PIWIL1Q96J94 861 aaKnown RBP19.26■□□□□ 0.67
PRPF40B-216ENST00000552301 PNKPQ96T60 521 aa19.26■□□□□ 0.67
PRPF40B-216ENST00000552301 IFNKQ9P0W0 207 aa19.26■□□□□ 0.67
PRPF40B-216ENST00000552301 CACNA1HO95180 2353 aa19.26■□□□□ 0.67
PRPF40B-216ENST00000552301 H0Y858 1186 aa19.25■□□□□ 0.67
PRPF40B-216ENST00000552301 GRAP2O75791 330 aa19.25■□□□□ 0.67
PRPF40B-216ENST00000552301 LATS1O95835 1130 aa19.25■□□□□ 0.67
PRPF40B-216ENST00000552301 APOEP02649 317 aa19.25■□□□□ 0.67
PRPF40B-216ENST00000552301 FYNP06241 537 aa19.25■□□□□ 0.67
PRPF40B-216ENST00000552301 TYRP14679 529 aa19.25■□□□□ 0.67
PRPF40B-216ENST00000552301 SLC11A2P49281 568 aa19.25■□□□□ 0.67
PRPF40B-216ENST00000552301 CCR3P51677 355 aa19.25■□□□□ 0.67
PRPF40B-216ENST00000552301 RING1Q06587 406 aa19.25■□□□□ 0.67
PRPF40B-216ENST00000552301 TCF15Q12870 199 aa19.25■□□□□ 0.67
PRPF40B-216ENST00000552301 TAF5Q15542 800 aa19.25■□□□□ 0.67
PRPF40B-216ENST00000552301 ASIC2Q16515 512 aa19.25■□□□□ 0.67
PRPF40B-216ENST00000552301 GAB4Q2WGN9 574 aa19.25■□□□□ 0.67
PRPF40B-216ENST00000552301 FAM102AQ5T9C2 384 aaPredicted RBP19.25■□□□□ 0.67
PRPF40B-216ENST00000552301 Q6ZS52 159 aa19.25■□□□□ 0.67
PRPF40B-216ENST00000552301 NUDT18Q6ZVK8 323 aa19.25■□□□□ 0.67
PRPF40B-216ENST00000552301 SLC26A9Q7LBE3 791 aa19.25■□□□□ 0.67
PRPF40B-216ENST00000552301 TAC4Q86UU9 113 aa19.25■□□□□ 0.67
PRPF40B-216ENST00000552301 C12orf40Q86WS4 652 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms