RNA–Protein interactions for RNA: ENST00000541342.2

SPIDR-227, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPIDR, Length 3,311 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-227ENST00000541342 KLF6Q99612 283 aaPredicted RBP17.82■□□□□ 0.44
SPIDR-227ENST00000541342 FAM105AQ9NUU6 356 aa17.82■□□□□ 0.44
SPIDR-227ENST00000541342 DCTN4Q9UJW0 460 aa17.82■□□□□ 0.44
SPIDR-227ENST00000541342 A6NHS1 94 aa17.82■□□□□ 0.44
SPIDR-227ENST00000541342 GOLGA8RI6L899 631 aa17.82■□□□□ 0.44
SPIDR-227ENST00000541342 PDGFRBP09619 1106 aa17.82■□□□□ 0.44
SPIDR-227ENST00000541342 IL1R2P27930 398 aa17.82■□□□□ 0.44
SPIDR-227ENST00000541342 RGS7P49802 495 aa17.82■□□□□ 0.44
SPIDR-227ENST00000541342 PLCB3Q01970 1234 aa17.82■□□□□ 0.44
SPIDR-227ENST00000541342 DEFB115Q30KQ5 88 aa17.82■□□□□ 0.44
SPIDR-227ENST00000541342 ZC3H12AQ5D1E8 599 aaKnown RBP17.82■□□□□ 0.44
SPIDR-227ENST00000541342 TRNP1Q6NT89 227 aa17.82■□□□□ 0.44
SPIDR-227ENST00000541342 FAM183BPQ6ZVS7 135 aa17.82■□□□□ 0.44
SPIDR-227ENST00000541342 UNC93AQ86WB7 457 aa17.82■□□□□ 0.44
SPIDR-227ENST00000541342 ZNF560Q96MR9 790 aa17.82■□□□□ 0.44
SPIDR-227ENST00000541342 PPCSQ9HAB8 311 aa17.82■□□□□ 0.44
SPIDR-227ENST00000541342 FETUBQ9UGM5 382 aa17.82■□□□□ 0.44
SPIDR-227ENST00000541342 CORO1CQ9ULV4 474 aaPredicted RBP17.82■□□□□ 0.44
SPIDR-227ENST00000541342 A8MXQ7 604 aa17.82■□□□□ 0.44
SPIDR-227ENST00000541342 H0Y3Z8 333 aa17.82■□□□□ 0.44
SPIDR-227ENST00000541342 XPOTO43592 962 aaKnown RBP17.82■□□□□ 0.44
SPIDR-227ENST00000541342 TMEM63AO94886 807 aa17.82■□□□□ 0.44
SPIDR-227ENST00000541342 CST5P28325 142 aaPredicted RBP17.82■□□□□ 0.44
SPIDR-227ENST00000541342 TAF6P49848 677 aa17.82■□□□□ 0.44
SPIDR-227ENST00000541342 LILRA4P59901 499 aa17.82■□□□□ 0.44
SPIDR-227ENST00000541342 DYNLT1P63172 113 aa17.82■□□□□ 0.44
SPIDR-227ENST00000541342 SMTNL2Q2TAL5 461 aa17.82■□□□□ 0.44
SPIDR-227ENST00000541342 FAM102AQ5T9C2 384 aaPredicted RBP17.82■□□□□ 0.44
SPIDR-227ENST00000541342 ACTL9Q8TC94 416 aa17.82■□□□□ 0.44
SPIDR-227ENST00000541342 CD99L2Q8TCZ2 262 aa17.82■□□□□ 0.44
SPIDR-227ENST00000541342 LPPQ93052 612 aa17.82■□□□□ 0.44
SPIDR-227ENST00000541342 ACSS3Q9H6R3 686 aa17.82■□□□□ 0.44
SPIDR-227ENST00000541342 GABBR2O75899 941 aa17.81■□□□□ 0.44
SPIDR-227ENST00000541342 UPP2O95045 317 aa17.81■□□□□ 0.44
SPIDR-227ENST00000541342 PTPN4P29074 926 aa17.81■□□□□ 0.44
SPIDR-227ENST00000541342 THPOP40225 353 aa17.81■□□□□ 0.44
SPIDR-227ENST00000541342 PTDSS1P48651 473 aaKnown RBP17.81■□□□□ 0.44
SPIDR-227ENST00000541342 STILQ15468 1287 aa17.81■□□□□ 0.44
SPIDR-227ENST00000541342 ANO7Q6IWH7 933 aa17.81■□□□□ 0.44
SPIDR-227ENST00000541342 EP400NLQ6ZTU2 488 aa17.81■□□□□ 0.44
SPIDR-227ENST00000541342 MICAL1Q8TDZ2 1067 aa17.81■□□□□ 0.44
SPIDR-227ENST00000541342 ANKRD27Q96NW4 1050 aa17.81■□□□□ 0.44
SPIDR-227ENST00000541342 SRRDQ9UH36 339 aa17.81■□□□□ 0.44
SPIDR-227ENST00000541342 E7ENQ6 273 aa17.81■□□□□ 0.44
SPIDR-227ENST00000541342 E7ESA3 106 aa17.81■□□□□ 0.44
SPIDR-227ENST00000541342 MLH1P40692 756 aa17.81■□□□□ 0.44
SPIDR-227ENST00000541342 PNPLA4P41247 253 aa17.81■□□□□ 0.44
SPIDR-227ENST00000541342 OTUD4Q01804 1114 aaKnown RBP17.81■□□□□ 0.44
SPIDR-227ENST00000541342 WASHC2DQ5SRD0 308 aa17.81■□□□□ 0.44
SPIDR-227ENST00000541342 MAP3K21Q5TCX8 1036 aa17.81■□□□□ 0.44
SPIDR-227ENST00000541342 CAPRIN2Q6IMN6 1127 aaKnown RBP17.81■□□□□ 0.44
SPIDR-227ENST00000541342 C3orf62Q6ZUJ4 267 aa17.81■□□□□ 0.44
SPIDR-227ENST00000541342 TAB3Q8N5C8 712 aaPredicted RBP17.81■□□□□ 0.44
SPIDR-227ENST00000541342 SLC35F5Q8WV83 523 aa17.81■□□□□ 0.44
SPIDR-227ENST00000541342 CADM1Q9BY67 442 aaKnown RBP17.81■□□□□ 0.44
SPIDR-227ENST00000541342 KCNK13Q9HB14 408 aa17.81■□□□□ 0.44
SPIDR-227ENST00000541342 TRPA1O75762 1119 aa17.8■□□□□ 0.44
SPIDR-227ENST00000541342 TOMM70O94826 608 aa17.8■□□□□ 0.44
SPIDR-227ENST00000541342 CCDC130P13994 396 aa17.8■□□□□ 0.44
SPIDR-227ENST00000541342 LRPAP1P30533 357 aa17.8■□□□□ 0.44
SPIDR-227ENST00000541342 NRLP54845 237 aa17.8■□□□□ 0.44
SPIDR-227ENST00000541342 KCNT1Q5JUK3 1230 aa17.8■□□□□ 0.44
SPIDR-227ENST00000541342 TRIM68Q6AZZ1 485 aa17.8■□□□□ 0.44
SPIDR-227ENST00000541342 PPIL6Q8IXY8 311 aa17.8■□□□□ 0.44
SPIDR-227ENST00000541342 FBXO36Q8NEA4 188 aa17.8■□□□□ 0.44
SPIDR-227ENST00000541342 PYROXD1Q8WU10 500 aa17.8■□□□□ 0.44
SPIDR-227ENST00000541342 PTCD3Q96EY7 689 aaKnown RBP17.8■□□□□ 0.44
SPIDR-227ENST00000541342 ALG13Q9NP73 1137 aaKnown RBP17.8■□□□□ 0.44
SPIDR-227ENST00000541342 LINGO3P0C6S8 592 aa17.8■□□□□ 0.44
SPIDR-227ENST00000541342 RPL22P35268 128 aaKnown RBP17.8■□□□□ 0.44
SPIDR-227ENST00000541342 GNL1P36915 607 aaPredicted RBP17.8■□□□□ 0.44
SPIDR-227ENST00000541342 IGDCC3Q8IVU1 814 aa17.8■□□□□ 0.44
SPIDR-227ENST00000541342 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.8■□□□□ 0.44
SPIDR-227ENST00000541342 ZNF398Q8TD17 642 aa17.8■□□□□ 0.44
SPIDR-227ENST00000541342 SAR1AQ9NR31 198 aa17.8■□□□□ 0.44
SPIDR-227ENST00000541342 TRMT13Q9NUP7 481 aaKnown RBP17.8■□□□□ 0.44
SPIDR-227ENST00000541342 MIOSQ9NXC5 875 aa17.8■□□□□ 0.44
SPIDR-227ENST00000541342 CD48P09326 243 aa17.8■□□□□ 0.44
SPIDR-227ENST00000541342 GRIK3Q13003 919 aa17.8■□□□□ 0.44
SPIDR-227ENST00000541342 SV2CQ496J9 727 aa17.8■□□□□ 0.44
SPIDR-227ENST00000541342 KHDC1Q4VXA5 237 aaKnown RBP17.8■□□□□ 0.44
SPIDR-227ENST00000541342 RAB6CQ53S08 254 aa17.8■□□□□ 0.44
SPIDR-227ENST00000541342 ARHGAP17Q68EM7 881 aa17.8■□□□□ 0.44
SPIDR-227ENST00000541342 OR6B2Q6IFH4 312 aa17.8■□□□□ 0.44
SPIDR-227ENST00000541342 DSTYKQ6XUX3 929 aa17.8■□□□□ 0.44
SPIDR-227ENST00000541342 OSTM1Q86WC4 334 aa17.8■□□□□ 0.44
SPIDR-227ENST00000541342 ATP11CQ8NB49 1132 aa17.8■□□□□ 0.44
SPIDR-227ENST00000541342 APPL2Q8NEU8 664 aa17.8■□□□□ 0.44
SPIDR-227ENST00000541342 GAD1Q99259 594 aa17.8■□□□□ 0.44
SPIDR-227ENST00000541342 RAB6CQ9H0N0 254 aa17.8■□□□□ 0.44
SPIDR-227ENST00000541342 ZWILCHQ9H900 591 aa17.8■□□□□ 0.44
SPIDR-227ENST00000541342 CHST12Q9NRB3 414 aa17.8■□□□□ 0.44
SPIDR-227ENST00000541342 ARL8BQ9NVJ2 186 aa17.8■□□□□ 0.44
SPIDR-227ENST00000541342 MGEA5O60502 916 aa17.79■□□□□ 0.44
SPIDR-227ENST00000541342 CD52P31358 61 aa17.79■□□□□ 0.44
SPIDR-227ENST00000541342 TAF5Q15542 800 aa17.79■□□□□ 0.44
SPIDR-227ENST00000541342 FAM182AQ5T1J6 154 aa17.79■□□□□ 0.44
SPIDR-227ENST00000541342 SH3PXD2AQ5TCZ1 1133 aa17.79■□□□□ 0.44
SPIDR-227ENST00000541342 C4orf50Q6ZRC1 276 aa17.79■□□□□ 0.44
SPIDR-227ENST00000541342 POLNQ7Z5Q5 900 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms