RNA–Protein interactions for RNA: ENST00000540725.5

SNHG1-213, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 1 (best) BASIC

Gene SNHG1, Length 1,374 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-213ENST00000540725 ZNF202O95125 648 aa14.85□□□□□ -0.03
SNHG1-213ENST00000540725 CFIP05156 583 aa14.85□□□□□ -0.03
SNHG1-213ENST00000540725 CISD3P0C7P0 127 aa14.85□□□□□ -0.03
SNHG1-213ENST00000540725 CEACAM1P13688 526 aa14.85□□□□□ -0.03
SNHG1-213ENST00000540725 ENGP17813 658 aa14.85□□□□□ -0.03
SNHG1-213ENST00000540725 HOXD12P35452 270 aa14.85□□□□□ -0.03
SNHG1-213ENST00000540725 MAPK8P45983 427 aa14.85□□□□□ -0.03
SNHG1-213ENST00000540725 MCCD1P59942 119 aaPredicted RBP14.85□□□□□ -0.03
SNHG1-213ENST00000540725 EDRF1Q3B7T1 1238 aa14.85□□□□□ -0.03
SNHG1-213ENST00000540725 SLC23A3Q6PIS1 610 aa14.85□□□□□ -0.03
SNHG1-213ENST00000540725 SMYD4Q8IYR2 804 aaPredicted RBP14.85□□□□□ -0.03
SNHG1-213ENST00000540725 TTC39CQ8N584 583 aa14.85□□□□□ -0.03
SNHG1-213ENST00000540725 DEFB119Q8N690 84 aa14.85□□□□□ -0.03
SNHG1-213ENST00000540725 SLC4A11Q8NBS3 891 aa14.85□□□□□ -0.03
SNHG1-213ENST00000540725 FBXL13Q8NEE6 735 aa14.85□□□□□ -0.03
SNHG1-213ENST00000540725 EEF2KMTQ96G04 330 aa14.85□□□□□ -0.03
SNHG1-213ENST00000540725 FAXDC2Q96IV6 333 aa14.85□□□□□ -0.03
SNHG1-213ENST00000540725 CDK5RAP1Q96SZ6 601 aaKnown RBP14.85□□□□□ -0.03
SNHG1-213ENST00000540725 CISHQ9NSE2 258 aa14.85□□□□□ -0.03
SNHG1-213ENST00000540725 CACNA2D2Q9NY47 1150 aa14.85□□□□□ -0.03
SNHG1-213ENST00000540725 RASAL2Q9UJF2 1139 aa14.85□□□□□ -0.03
SNHG1-213ENST00000540725 ATP6V1DQ9Y5K8 247 aa14.85□□□□□ -0.03
SNHG1-213ENST00000540725 ZNF217O75362 1048 aa14.84□□□□□ -0.03
SNHG1-213ENST00000540725 KLKB1P03952 638 aa14.84□□□□□ -0.03
SNHG1-213ENST00000540725 RAD23BP54727 409 aa14.84□□□□□ -0.03
SNHG1-213ENST00000540725 COG7P83436 770 aa14.84□□□□□ -0.03
SNHG1-213ENST00000540725 ZNF33AQ06730 810 aa14.84□□□□□ -0.03
SNHG1-213ENST00000540725 EFEMP1Q12805 493 aa14.84□□□□□ -0.03
SNHG1-213ENST00000540725 FOXC1Q12948 553 aa14.84□□□□□ -0.03
SNHG1-213ENST00000540725 DEFB124Q8NES8 71 aa14.84□□□□□ -0.03
SNHG1-213ENST00000540725 P2RY11Q96G91 374 aa14.84□□□□□ -0.03
SNHG1-213ENST00000540725 TMEM176AQ96HP8 235 aa14.84□□□□□ -0.03
SNHG1-213ENST00000540725 ARID3AQ99856 593 aa14.84□□□□□ -0.03
SNHG1-213ENST00000540725 DCLK3Q9C098 648 aa14.84□□□□□ -0.03
SNHG1-213ENST00000540725 RAB20Q9NX57 234 aa14.84□□□□□ -0.03
SNHG1-213ENST00000540725 FBXO10Q9UK96 956 aa14.84□□□□□ -0.03
SNHG1-213ENST00000540725 CYP8B1Q9UNU6 501 aa14.84□□□□□ -0.03
SNHG1-213ENST00000540725 ZNF510Q9Y2H8 683 aa14.84□□□□□ -0.03
SNHG1-213ENST00000540725 RAD54BQ9Y620 910 aa14.84□□□□□ -0.03
SNHG1-213ENST00000540725 ZFYVE26Q68DK2 2539 aa14.83□□□□□ -0.04
SNHG1-213ENST00000540725 GFRA2O00451 464 aa14.83□□□□□ -0.04
SNHG1-213ENST00000540725 CETN3O15182 167 aa14.83□□□□□ -0.04
SNHG1-213ENST00000540725 STX10O60499 249 aa14.83□□□□□ -0.04
SNHG1-213ENST00000540725 PENKP01210 267 aaPredicted RBP14.83□□□□□ -0.04
SNHG1-213ENST00000540725 HMBSP08397 361 aa14.83□□□□□ -0.04
SNHG1-213ENST00000540725 EPB41P11171 864 aaKnown RBP14.83□□□□□ -0.04
SNHG1-213ENST00000540725 CORO1AP31146 461 aaKnown RBP14.83□□□□□ -0.04
SNHG1-213ENST00000540725 NUMA1Q14980 2115 aa14.83□□□□□ -0.04
SNHG1-213ENST00000540725 DUOXA1Q1HG43 343 aa14.83□□□□□ -0.04
SNHG1-213ENST00000540725 ARHGAP17Q68EM7 881 aa14.83□□□□□ -0.04
SNHG1-213ENST00000540725 PIGZQ86VD9 579 aa14.83□□□□□ -0.04
SNHG1-213ENST00000540725 CEP76Q8TAP6 659 aa14.83□□□□□ -0.04
SNHG1-213ENST00000540725 SLC6A17Q9H1V8 727 aa14.83□□□□□ -0.04
SNHG1-213ENST00000540725 GDPD2Q9HCC8 539 aa14.83□□□□□ -0.04
SNHG1-213ENST00000540725 FSCN3Q9NQT6 498 aa14.83□□□□□ -0.04
SNHG1-213ENST00000540725 SLC6A14Q9UN76 642 aa14.83□□□□□ -0.04
SNHG1-213ENST00000540725 SLC27A6Q9Y2P4 619 aa14.83□□□□□ -0.04
SNHG1-213ENST00000540725 ZZEF1O43149 2961 aa14.82□□□□□ -0.04
SNHG1-213ENST00000540725 CABIN1Q9Y6J0 2220 aa14.82□□□□□ -0.04
SNHG1-213ENST00000540725 WASH3PC4AMC7 463 aa14.82□□□□□ -0.04
SNHG1-213ENST00000540725 SERPINF2P08697 491 aa14.82□□□□□ -0.04
SNHG1-213ENST00000540725 CHKAP35790 457 aa14.82□□□□□ -0.04
SNHG1-213ENST00000540725 ATXN3P54252 364 aaPredicted RBP14.82□□□□□ -0.04
SNHG1-213ENST00000540725 RAB41Q5JT25 222 aa14.82□□□□□ -0.04
SNHG1-213ENST00000540725 FYB2Q5VWT5 728 aa14.82□□□□□ -0.04
SNHG1-213ENST00000540725 KIAA1324Q6UXG2 1013 aaKnown RBP14.82□□□□□ -0.04
SNHG1-213ENST00000540725 RSRC2Q7L4I2 434 aaKnown RBP14.82□□□□□ -0.04
SNHG1-213ENST00000540725 RABEPKQ7Z6M1 372 aa14.82□□□□□ -0.04
SNHG1-213ENST00000540725 SLC41A1Q8IVJ1 513 aa14.82□□□□□ -0.04
SNHG1-213ENST00000540725 ARHGAP18Q8N392 663 aa14.82□□□□□ -0.04
SNHG1-213ENST00000540725 ANKRD52Q8NB46 1076 aa14.82□□□□□ -0.04
SNHG1-213ENST00000540725 TATDN2Q93075 761 aa14.82□□□□□ -0.04
SNHG1-213ENST00000540725 CCDC34Q96HJ3 373 aa14.82□□□□□ -0.04
SNHG1-213ENST00000540725 MRGPRX1Q96LB2 322 aa14.82□□□□□ -0.04
SNHG1-213ENST00000540725 HSPA12BQ96MM6 686 aa14.82□□□□□ -0.04
SNHG1-213ENST00000540725 UBXN6Q9BZV1 441 aa14.82□□□□□ -0.04
SNHG1-213ENST00000540725 FAM124BQ9H5Z6 455 aaPredicted RBP14.82□□□□□ -0.04
SNHG1-213ENST00000540725 CAPN10Q9HC96 672 aa14.82□□□□□ -0.04
SNHG1-213ENST00000540725 CD93Q9NPY3 652 aa14.82□□□□□ -0.04
SNHG1-213ENST00000540725 MARCH2Q9P0N8 246 aa14.82□□□□□ -0.04
SNHG1-213ENST00000540725 STRIP2Q9ULQ0 834 aa14.82□□□□□ -0.04
SNHG1-213ENST00000540725 WASF3Q9UPY6 502 aa14.82□□□□□ -0.04
SNHG1-213ENST00000540725 STON1Q9Y6Q2 735 aa14.82□□□□□ -0.04
SNHG1-213ENST00000540725 PKD1L2Q7Z442 2459 aa14.81□□□□□ -0.04
SNHG1-213ENST00000540725 MFAP3P55082 362 aa14.81□□□□□ -0.04
SNHG1-213ENST00000540725 SLC8A3P57103 927 aa14.81□□□□□ -0.04
SNHG1-213ENST00000540725 YWHAGP61981 247 aaKnown RBP eCLIP14.81□□□□□ -0.04
SNHG1-213ENST00000540725 GFPT1Q06210 699 aaPredicted RBP14.81□□□□□ -0.04
SNHG1-213ENST00000540725 PNOCQ13519 176 aa14.81□□□□□ -0.04
SNHG1-213ENST00000540725 STARD3Q14849 445 aa14.81□□□□□ -0.04
SNHG1-213ENST00000540725 GEN1Q17RS7 908 aa14.81□□□□□ -0.04
SNHG1-213ENST00000540725 DCAF17Q5H9S7 520 aaPredicted RBP14.81□□□□□ -0.04
SNHG1-213ENST00000540725 TCERG1LQ5VWI1 586 aa14.81□□□□□ -0.04
SNHG1-213ENST00000540725 DENND1CQ8IV53 801 aa14.81□□□□□ -0.04
SNHG1-213ENST00000540725 TRIML1Q8N9V2 468 aa14.81□□□□□ -0.04
SNHG1-213ENST00000540725 GTPBP2Q9BX10 602 aaKnown RBP14.81□□□□□ -0.04
SNHG1-213ENST00000540725 SLC32A1Q9H598 525 aa14.81□□□□□ -0.04
SNHG1-213ENST00000540725 AGO1Q9UL18 857 aaKnown RBP14.81□□□□□ -0.04
SNHG1-213ENST00000540725 ANKRD11Q6UB99 2663 aaPredicted RBP14.81□□□□□ -0.04
SNHG1-213ENST00000540725 CACNA1GO43497 2377 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms