RNA–Protein interactions for RNA: ENST00000535958.1

TNFRSF1A-207, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-207ENST00000535958 ASPAP45381 313 aa13.64□□□□□ -0.23
TNFRSF1A-207ENST00000535958 ZNF132P52740 706 aa13.64□□□□□ -0.23
TNFRSF1A-207ENST00000535958 CLDN10P78369 228 aa13.64□□□□□ -0.23
TNFRSF1A-207ENST00000535958 COG7P83436 770 aa13.64□□□□□ -0.23
TNFRSF1A-207ENST00000535958 RING1Q06587 406 aa13.64□□□□□ -0.23
TNFRSF1A-207ENST00000535958 GRIK2Q13002 908 aa13.64□□□□□ -0.23
TNFRSF1A-207ENST00000535958 ACAP1Q15027 740 aa13.64□□□□□ -0.23
TNFRSF1A-207ENST00000535958 ZACNQ401N2 412 aa13.64□□□□□ -0.23
TNFRSF1A-207ENST00000535958 SPOPLQ6IQ16 392 aa13.64□□□□□ -0.23
TNFRSF1A-207ENST00000535958 RSRC2Q7L4I2 434 aaKnown RBP13.64□□□□□ -0.23
TNFRSF1A-207ENST00000535958 GPRIN1Q7Z2K8 1008 aa13.64□□□□□ -0.23
TNFRSF1A-207ENST00000535958 ANKS1BQ7Z6G8 1248 aa13.64□□□□□ -0.23
TNFRSF1A-207ENST00000535958 SLC9A9Q8IVB4 645 aa13.64□□□□□ -0.23
TNFRSF1A-207ENST00000535958 ZCCHC9Q8N567 271 aaKnown RBP13.64□□□□□ -0.23
TNFRSF1A-207ENST00000535958 SETD7Q8WTS6 366 aaKnown RBP13.64□□□□□ -0.23
TNFRSF1A-207ENST00000535958 PRCCQ92733 491 aaPredicted RBP13.64□□□□□ -0.23
TNFRSF1A-207ENST00000535958 CCDC47Q96A33 483 aaKnown RBP13.64□□□□□ -0.23
TNFRSF1A-207ENST00000535958 TOE1Q96GM8 510 aaKnown RBP13.64□□□□□ -0.23
TNFRSF1A-207ENST00000535958 ZNF419Q96HQ0 510 aaPredicted RBP13.64□□□□□ -0.23
TNFRSF1A-207ENST00000535958 HNRNPABQ99729 332 aaKnown RBP13.64□□□□□ -0.23
TNFRSF1A-207ENST00000535958 GPR174Q9BXC1 333 aa13.64□□□□□ -0.23
TNFRSF1A-207ENST00000535958 NUDT5Q9UKK9 219 aa13.64□□□□□ -0.23
TNFRSF1A-207ENST00000535958 HCN2Q9UL51 889 aa13.64□□□□□ -0.23
TNFRSF1A-207ENST00000535958 STRIP2Q9ULQ0 834 aa13.64□□□□□ -0.23
TNFRSF1A-207ENST00000535958 PCNX2A6NKB5 2137 aa13.63□□□□□ -0.23
TNFRSF1A-207ENST00000535958 ATRXP46100 2492 aa13.63□□□□□ -0.23
TNFRSF1A-207ENST00000535958 PDXKO00764 312 aa13.63□□□□□ -0.23
TNFRSF1A-207ENST00000535958 IKBKBO14920 756 aa13.63□□□□□ -0.23
TNFRSF1A-207ENST00000535958 GREM1O60565 184 aa13.63□□□□□ -0.23
TNFRSF1A-207ENST00000535958 HLA-DRAP01903 254 aa13.63□□□□□ -0.23
TNFRSF1A-207ENST00000535958 HMBSP08397 361 aa13.63□□□□□ -0.23
TNFRSF1A-207ENST00000535958 KRT13P13646 458 aa13.63□□□□□ -0.23
TNFRSF1A-207ENST00000535958 PDIA4P13667 645 aaKnown RBP13.63□□□□□ -0.23
TNFRSF1A-207ENST00000535958 MAOBP27338 520 aa13.63□□□□□ -0.23
TNFRSF1A-207ENST00000535958 PGFP49763 221 aa13.63□□□□□ -0.23
TNFRSF1A-207ENST00000535958 SLC8A3P57103 927 aa13.63□□□□□ -0.23
TNFRSF1A-207ENST00000535958 FAM193AP78312 1265 aa13.63□□□□□ -0.23
TNFRSF1A-207ENST00000535958 DLG4P78352 724 aa13.63□□□□□ -0.23
TNFRSF1A-207ENST00000535958 FUT11Q495W5 492 aa13.63□□□□□ -0.23
TNFRSF1A-207ENST00000535958 IL27RAQ6UWB1 636 aa13.63□□□□□ -0.23
TNFRSF1A-207ENST00000535958 LRSAM1Q6UWE0 723 aa13.63□□□□□ -0.23
TNFRSF1A-207ENST00000535958 SV2AQ7L0J3 742 aa13.63□□□□□ -0.23
TNFRSF1A-207ENST00000535958 RAB44Q7Z6P3 723 aaPredicted RBP13.63□□□□□ -0.23
TNFRSF1A-207ENST00000535958 PROSER1Q86XN7 944 aa13.63□□□□□ -0.23
TNFRSF1A-207ENST00000535958 CACUL1Q86Y37 369 aa13.63□□□□□ -0.23
TNFRSF1A-207ENST00000535958 GRAMD1CQ8IYS0 662 aa13.63□□□□□ -0.23
TNFRSF1A-207ENST00000535958 ARHGAP18Q8N392 663 aa13.63□□□□□ -0.23
TNFRSF1A-207ENST00000535958 TMC2Q8TDI7 906 aa13.63□□□□□ -0.23
TNFRSF1A-207ENST00000535958 SNX19Q92543 992 aa13.63□□□□□ -0.23
TNFRSF1A-207ENST00000535958 SIPA1Q96FS4 1042 aa13.63□□□□□ -0.23
TNFRSF1A-207ENST00000535958 CAMK1GQ96NX5 476 aa13.63□□□□□ -0.23
TNFRSF1A-207ENST00000535958 BACH2Q9BYV9 841 aa13.63□□□□□ -0.23
TNFRSF1A-207ENST00000535958 CIPCQ9C0C6 399 aa13.63□□□□□ -0.23
TNFRSF1A-207ENST00000535958 MMRN2Q9H8L6 949 aa13.63□□□□□ -0.23
TNFRSF1A-207ENST00000535958 CYP3A43Q9HB55 503 aa13.63□□□□□ -0.23
TNFRSF1A-207ENST00000535958 NMUR1Q9HB89 426 aa13.63□□□□□ -0.23
TNFRSF1A-207ENST00000535958 CD93Q9NPY3 652 aa13.63□□□□□ -0.23
TNFRSF1A-207ENST00000535958 OSER1Q9NX31 292 aa13.63□□□□□ -0.23
TNFRSF1A-207ENST00000535958 WDFY3Q8IZQ1 3526 aa13.63□□□□□ -0.23
TNFRSF1A-207ENST00000535958 WASH3PC4AMC7 463 aa13.62□□□□□ -0.23
TNFRSF1A-207ENST00000535958 STC2O76061 302 aa13.62□□□□□ -0.23
TNFRSF1A-207ENST00000535958 CORO1AP31146 461 aaKnown RBP13.62□□□□□ -0.23
TNFRSF1A-207ENST00000535958 MATKP42679 507 aa13.62□□□□□ -0.23
TNFRSF1A-207ENST00000535958 VAMP7P51809 220 aa13.62□□□□□ -0.23
TNFRSF1A-207ENST00000535958 MFAP3P55082 362 aa13.62□□□□□ -0.23
TNFRSF1A-207ENST00000535958 INCA1Q0VD86 236 aa13.62□□□□□ -0.23
TNFRSF1A-207ENST00000535958 EFEMP1Q12805 493 aa13.62□□□□□ -0.23
TNFRSF1A-207ENST00000535958 STK4Q13043 487 aa13.62□□□□□ -0.23
TNFRSF1A-207ENST00000535958 EIF4HQ15056 248 aaKnown RBP13.62□□□□□ -0.23
TNFRSF1A-207ENST00000535958 DCAF12L1Q5VU92 463 aa13.62□□□□□ -0.23
TNFRSF1A-207ENST00000535958 RESP18Q5W5W9 173 aa13.62□□□□□ -0.23
TNFRSF1A-207ENST00000535958 Q6ZNB5 142 aa13.62□□□□□ -0.23
TNFRSF1A-207ENST00000535958 CCDC186Q7Z3E2 898 aa13.62□□□□□ -0.23
TNFRSF1A-207ENST00000535958 METTL3Q86U44 580 aaKnown RBP13.62□□□□□ -0.23
TNFRSF1A-207ENST00000535958 KIAA0895Q8NCT3 520 aa13.62□□□□□ -0.23
TNFRSF1A-207ENST00000535958 CADM4Q8NFZ8 388 aa13.62□□□□□ -0.23
TNFRSF1A-207ENST00000535958 ADAMTS14Q8WXS8 1223 aa13.62□□□□□ -0.23
TNFRSF1A-207ENST00000535958 NIF3L1Q9GZT8 377 aa13.62□□□□□ -0.23
TNFRSF1A-207ENST00000535958 CCDC86Q9H6F5 360 aaKnown RBP13.62□□□□□ -0.23
TNFRSF1A-207ENST00000535958 CD248Q9HCU0 757 aa13.62□□□□□ -0.23
TNFRSF1A-207ENST00000535958 WSB2Q9NYS7 404 aaPredicted RBP13.62□□□□□ -0.23
TNFRSF1A-207ENST00000535958 CLIC5Q9NZA1 410 aa13.62□□□□□ -0.23
TNFRSF1A-207ENST00000535958 SERTAD1Q9UHV2 236 aa13.62□□□□□ -0.23
TNFRSF1A-207ENST00000535958 CFAP45Q9UL16 551 aa13.62□□□□□ -0.23
TNFRSF1A-207ENST00000535958 SLC27A6Q9Y2P4 619 aa13.62□□□□□ -0.23
TNFRSF1A-207ENST00000535958 NFE2L3Q9Y4A8 694 aa13.62□□□□□ -0.23
TNFRSF1A-207ENST00000535958 PKD1L2Q7Z442 2459 aa13.62□□□□□ -0.23
TNFRSF1A-207ENST00000535958 FAM221BA6H8Z2 402 aa13.61□□□□□ -0.23
TNFRSF1A-207ENST00000535958 EPHX1P07099 455 aa13.61□□□□□ -0.23
TNFRSF1A-207ENST00000535958 CISD3P0C7P0 127 aa13.61□□□□□ -0.23
TNFRSF1A-207ENST00000535958 IL12RB1P42701 662 aa13.61□□□□□ -0.23
TNFRSF1A-207ENST00000535958 KIF11P52732 1056 aa13.61□□□□□ -0.23
TNFRSF1A-207ENST00000535958 SCAPQ12770 1279 aa13.61□□□□□ -0.23
TNFRSF1A-207ENST00000535958 KMT5BQ4FZB7 885 aa13.61□□□□□ -0.23
TNFRSF1A-207ENST00000535958 SERPINA13PQ6UXR4 307 aa13.61□□□□□ -0.23
TNFRSF1A-207ENST00000535958 INTS8Q75QN2 995 aaKnown RBP13.61□□□□□ -0.23
TNFRSF1A-207ENST00000535958 TMPRSS6Q8IU80 811 aa13.61□□□□□ -0.23
TNFRSF1A-207ENST00000535958 TTC39CQ8N584 583 aa13.61□□□□□ -0.23
TNFRSF1A-207ENST00000535958 PNPLA1Q8N8W4 532 aa13.61□□□□□ -0.23
TNFRSF1A-207ENST00000535958 ENGASEQ8NFI3 743 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms