RNA–Protein interactions for RNA: ENST00000533482.5

RAD50-209, Transcript of RAD50 double strand break repair protein, humanhuman

TSL 1 (best)

Gene RAD50, Length 4,373 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD50-209ENST00000533482 ZFP42Q96MM3 310 aa12.81□□□□□ -0.36
RAD50-209ENST00000533482 ULBP1Q9BZM6 244 aa12.81□□□□□ -0.36
RAD50-209ENST00000533482 MYLK2Q9H1R3 596 aa12.81□□□□□ -0.36
RAD50-209ENST00000533482 SMPD4Q9NXE4 827 aa12.81□□□□□ -0.36
RAD50-209ENST00000533482 CSE1LP55060 971 aaKnown RBP12.8□□□□□ -0.36
RAD50-209ENST00000533482 ZNF280AP59817 542 aaPredicted RBP12.8□□□□□ -0.36
RAD50-209ENST00000533482 LRRC8EQ6NSJ5 796 aa12.8□□□□□ -0.36
RAD50-209ENST00000533482 CKAP2Q8WWK9 683 aa12.8□□□□□ -0.36
RAD50-209ENST00000533482 ATXN2LQ8WWM7 1075 aaKnown RBP12.8□□□□□ -0.36
RAD50-209ENST00000533482 MTG1Q9BT17 334 aaPredicted RBP12.8□□□□□ -0.36
RAD50-209ENST00000533482 FRMD8Q9BZ67 464 aaPredicted RBP12.8□□□□□ -0.36
RAD50-209ENST00000533482 IL1RL2Q9HB29 575 aa12.8□□□□□ -0.36
RAD50-209ENST00000533482 ARHGAP28Q9P2N2 729 aa12.8□□□□□ -0.36
RAD50-209ENST00000533482 NOCTQ9UK39 431 aaKnown RBP12.8□□□□□ -0.36
RAD50-209ENST00000533482 LRRC37A3O60309 1634 aa12.8□□□□□ -0.36
RAD50-209ENST00000533482 E9PBE3 544 aa12.8□□□□□ -0.36
RAD50-209ENST00000533482 GPR25O00155 361 aa12.8□□□□□ -0.36
RAD50-209ENST00000533482 KLHL41O60662 606 aa12.8□□□□□ -0.36
RAD50-209ENST00000533482 MMP8P22894 467 aa12.8□□□□□ -0.36
RAD50-209ENST00000533482 PHF13Q86YI8 300 aaPredicted RBP12.8□□□□□ -0.36
RAD50-209ENST00000533482 TRIM62Q9BVG3 475 aa12.8□□□□□ -0.36
RAD50-209ENST00000533482 TSPYL2Q9H2G4 693 aaPredicted RBP12.8□□□□□ -0.36
RAD50-209ENST00000533482 CDY2AQ9Y6F7 541 aa12.8□□□□□ -0.36
RAD50-209ENST00000533482 ZNF536O15090 1300 aa12.8□□□□□ -0.36
RAD50-209ENST00000533482 C5P01031 1676 aa12.8□□□□□ -0.36
RAD50-209ENST00000533482 PAEPP09466 180 aa12.8□□□□□ -0.36
RAD50-209ENST00000533482 KLC1Q07866 573 aa12.8□□□□□ -0.36
RAD50-209ENST00000533482 ITGA9Q13797 1035 aa12.8□□□□□ -0.36
RAD50-209ENST00000533482 FASTKD3Q14CZ7 662 aaKnown RBP12.8□□□□□ -0.36
RAD50-209ENST00000533482 HSP90AA5PQ58FG0 334 aa12.8□□□□□ -0.36
RAD50-209ENST00000533482 TAF2Q6P1X5 1199 aa12.8□□□□□ -0.36
RAD50-209ENST00000533482 FAM183BPQ6ZVS7 135 aa12.8□□□□□ -0.36
RAD50-209ENST00000533482 PLPPR4Q7Z2D5 763 aa12.8□□□□□ -0.36
RAD50-209ENST00000533482 GALNT4Q8N4A0 578 aa12.8□□□□□ -0.36
RAD50-209ENST00000533482 MTMR14Q8NCE2 650 aa12.8□□□□□ -0.36
RAD50-209ENST00000533482 ICA1LQ8NDH6 482 aa12.8□□□□□ -0.36
RAD50-209ENST00000533482 DHX33Q9H6R0 707 aaKnown RBP12.8□□□□□ -0.36
RAD50-209ENST00000533482 TMEM51Q9NW97 253 aa12.8□□□□□ -0.36
RAD50-209ENST00000533482 DLGAP2Q9P1A6 1054 aa12.8□□□□□ -0.36
RAD50-209ENST00000533482 AURKCQ9UQB9 309 aa12.8□□□□□ -0.36
RAD50-209ENST00000533482 ATRNL1Q5VV63 1379 aa12.8□□□□□ -0.36
RAD50-209ENST00000533482 MYH10P35580 1976 aa12.8□□□□□ -0.36
RAD50-209ENST00000533482 hCG_1818297A0A087WSY0 165 aa12.79□□□□□ -0.36
RAD50-209ENST00000533482 TMEM191CA6NGB0 347 aa12.79□□□□□ -0.36
RAD50-209ENST00000533482 O00370 1275 aa12.79□□□□□ -0.36
RAD50-209ENST00000533482 HSPA8P11142 646 aaKnown RBP12.79□□□□□ -0.36
RAD50-209ENST00000533482 SERPINB5P36952 375 aa12.79□□□□□ -0.36
RAD50-209ENST00000533482 POU6F1Q14863 301 aa12.79□□□□□ -0.36
RAD50-209ENST00000533482 DNAL1Q4LDG9 190 aa12.79□□□□□ -0.36
RAD50-209ENST00000533482 PIGZQ86VD9 579 aa12.79□□□□□ -0.36
RAD50-209ENST00000533482 TTC30AQ86WT1 665 aa12.79□□□□□ -0.36
RAD50-209ENST00000533482 CPXM1Q96SM3 734 aa12.79□□□□□ -0.36
RAD50-209ENST00000533482 APOBEC3GQ9HC16 384 aaKnown RBP12.79□□□□□ -0.36
RAD50-209ENST00000533482 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.79□□□□□ -0.36
RAD50-209ENST00000533482 MYPNQ86TC9 1320 aa12.79□□□□□ -0.36
RAD50-209ENST00000533482 SPEF2Q9C093 1822 aa12.79□□□□□ -0.36
RAD50-209ENST00000533482 SLC12A8A0AV02 714 aa12.79□□□□□ -0.36
RAD50-209ENST00000533482 GSTA4O15217 222 aa12.79□□□□□ -0.36
RAD50-209ENST00000533482 C4BPAP04003 597 aaKnown RBP12.79□□□□□ -0.36
RAD50-209ENST00000533482 FDFT1P37268 417 aa12.79□□□□□ -0.36
RAD50-209ENST00000533482 SLC6A3Q01959 620 aa12.79□□□□□ -0.36
RAD50-209ENST00000533482 FAM171A1Q5VUB5 890 aa12.79□□□□□ -0.36
RAD50-209ENST00000533482 NAPEPLDQ6IQ20 393 aa12.79□□□□□ -0.36
RAD50-209ENST00000533482 ELMOD1Q8N336 334 aa12.79□□□□□ -0.36
RAD50-209ENST00000533482 NDRG1Q92597 394 aaKnown RBP12.79□□□□□ -0.36
RAD50-209ENST00000533482 GMLQ99445 158 aa12.79□□□□□ -0.36
RAD50-209ENST00000533482 CATSPERBQ9H7T0 1116 aa12.79□□□□□ -0.36
RAD50-209ENST00000533482 NRCAMQ92823 1304 aa12.79□□□□□ -0.36
RAD50-209ENST00000533482 CYTH1Q15438 398 aa12.79□□□□□ -0.36
RAD50-209ENST00000533482 UGP2Q16851 508 aa12.79□□□□□ -0.36
RAD50-209ENST00000533482 EML3Q32P44 896 aa12.79□□□□□ -0.36
RAD50-209ENST00000533482 N4BP2L1Q5TBK1 243 aaPredicted RBP12.79□□□□□ -0.36
RAD50-209ENST00000533482 TMEM154Q6P9G4 183 aa12.79□□□□□ -0.36
RAD50-209ENST00000533482 ZNF410Q86VK4 478 aa12.79□□□□□ -0.36
RAD50-209ENST00000533482 ALLCQ8N6M5 410 aa12.79□□□□□ -0.36
RAD50-209ENST00000533482 TEX9Q8N6V9 391 aa12.79□□□□□ -0.36
RAD50-209ENST00000533482 PCSK9Q8NBP7 692 aaKnown RBP12.79□□□□□ -0.36
RAD50-209ENST00000533482 HTR3CQ8WXA8 447 aa12.79□□□□□ -0.36
RAD50-209ENST00000533482 SPOCK2Q92563 424 aa12.79□□□□□ -0.36
RAD50-209ENST00000533482 FRMD8P1Q9BZ68 369 aaPredicted RBP12.79□□□□□ -0.36
RAD50-209ENST00000533482 TXNRD2Q9NNW7 524 aa12.79□□□□□ -0.36
RAD50-209ENST00000533482 GLTPD2A6NH11 291 aa12.79□□□□□ -0.36
RAD50-209ENST00000533482 RNF103O00237 685 aa12.79□□□□□ -0.36
RAD50-209ENST00000533482 FCHO1O14526 889 aa12.79□□□□□ -0.36
RAD50-209ENST00000533482 DPYSL4O14531 572 aa12.79□□□□□ -0.36
RAD50-209ENST00000533482 DHX15O43143 795 aaKnown RBP12.79□□□□□ -0.36
RAD50-209ENST00000533482 TREHO43280 583 aa12.79□□□□□ -0.36
RAD50-209ENST00000533482 HNRNPCL1O60812 293 aaKnown RBP12.79□□□□□ -0.36
RAD50-209ENST00000533482 FSBPO95073 299 aa12.79□□□□□ -0.36
RAD50-209ENST00000533482 ELNP15502 786 aa12.79□□□□□ -0.36
RAD50-209ENST00000533482 PPP1R26Q5T8A7 1209 aaPredicted RBP12.79□□□□□ -0.36
RAD50-209ENST00000533482 SDHAF4Q5VUM1 108 aa12.79□□□□□ -0.36
RAD50-209ENST00000533482 PLEKHO2Q8TD55 490 aa12.79□□□□□ -0.36
RAD50-209ENST00000533482 SNRNP25Q9BV90 132 aaKnown RBP12.79□□□□□ -0.36
RAD50-209ENST00000533482 RBPJLQ9UBG7 517 aa12.79□□□□□ -0.36
RAD50-209ENST00000533482 TUBGCP4Q9UGJ1 667 aa12.79□□□□□ -0.36
RAD50-209ENST00000533482 FAF1Q9UNN5 650 aaPredicted RBP12.79□□□□□ -0.36
RAD50-209ENST00000533482 ZBTB24O43167 697 aaPredicted RBP12.78□□□□□ -0.36
RAD50-209ENST00000533482 CFHP08603 1231 aa12.78□□□□□ -0.36
RAD50-209ENST00000533482 LHX1P48742 406 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms