RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 GLULP15104 373 aa12.51□□□□□ -0.41
SSBP3-214ENST00000533209 CD72P21854 359 aa12.51□□□□□ -0.41
SSBP3-214ENST00000533209 HNRNPH3P31942 346 aaKnown RBP12.51□□□□□ -0.41
SSBP3-214ENST00000533209 NSFP46459 744 aaKnown RBP12.51□□□□□ -0.41
SSBP3-214ENST00000533209 KPNA1P52294 538 aaPredicted RBP12.51□□□□□ -0.41
SSBP3-214ENST00000533209 PITX1P78337 314 aaPredicted RBP12.51□□□□□ -0.41
SSBP3-214ENST00000533209 TRIP4Q15650 581 aaPredicted RBP12.51□□□□□ -0.41
SSBP3-214ENST00000533209 CWF19L1Q69YN2 538 aaKnown RBP12.51□□□□□ -0.41
SSBP3-214ENST00000533209 MON1BQ7L1V2 547 aa12.51□□□□□ -0.41
SSBP3-214ENST00000533209 TAC4Q86UU9 113 aa12.51□□□□□ -0.41
SSBP3-214ENST00000533209 PHF13Q86YI8 300 aaPredicted RBP12.51□□□□□ -0.41
SSBP3-214ENST00000533209 DEFB106AQ8N104 65 aa12.51□□□□□ -0.41
SSBP3-214ENST00000533209 CPA6Q8N4T0 437 aa12.51□□□□□ -0.41
SSBP3-214ENST00000533209 PLD4Q96BZ4 506 aa12.51□□□□□ -0.41
SSBP3-214ENST00000533209 OTUB2Q96DC9 234 aa12.51□□□□□ -0.41
SSBP3-214ENST00000533209 CHFRQ96EP1 664 aa12.51□□□□□ -0.41
SSBP3-214ENST00000533209 SHDQ96IW2 340 aa12.51□□□□□ -0.41
SSBP3-214ENST00000533209 DNAJC7Q99615 494 aa12.51□□□□□ -0.41
SSBP3-214ENST00000533209 C11orf70Q9BRQ4 267 aa12.51□□□□□ -0.41
SSBP3-214ENST00000533209 DCLK3Q9C098 648 aa12.51□□□□□ -0.41
SSBP3-214ENST00000533209 C8orf33Q9H7E9 229 aaPredicted RBP12.51□□□□□ -0.41
SSBP3-214ENST00000533209 TAS2R14Q9NYV8 317 aa12.51□□□□□ -0.41
SSBP3-214ENST00000533209 F5P12259 2224 aa12.5□□□□□ -0.41
SSBP3-214ENST00000533209 KANSL1LA0AUZ9 987 aa12.5□□□□□ -0.41
SSBP3-214ENST00000533209 GOLGA8SH3BPF8 625 aa12.5□□□□□ -0.41
SSBP3-214ENST00000533209 CAPN9O14815 690 aa12.5□□□□□ -0.41
SSBP3-214ENST00000533209 DAB1O75553 588 aa12.5□□□□□ -0.41
SSBP3-214ENST00000533209 NFATC1O95644 943 aa12.5□□□□□ -0.41
SSBP3-214ENST00000533209 TRUB2O95900 331 aaKnown RBP12.5□□□□□ -0.41
SSBP3-214ENST00000533209 IGLV3-25P01717 112 aa12.5□□□□□ -0.41
SSBP3-214ENST00000533209 IGLV3-27P01718 113 aa12.5□□□□□ -0.41
SSBP3-214ENST00000533209 CYP17A1P05093 508 aa12.5□□□□□ -0.41
SSBP3-214ENST00000533209 SERPING1P05155 500 aa12.5□□□□□ -0.41
SSBP3-214ENST00000533209 PLEKP08567 350 aaPredicted RBP12.5□□□□□ -0.41
SSBP3-214ENST00000533209 CORO1AP31146 461 aaKnown RBP12.5□□□□□ -0.41
SSBP3-214ENST00000533209 CTHP32929 405 aa12.5□□□□□ -0.41
SSBP3-214ENST00000533209 ZNF75DP51815 510 aa12.5□□□□□ -0.41
SSBP3-214ENST00000533209 RING1Q06587 406 aa12.5□□□□□ -0.41
SSBP3-214ENST00000533209 TBX2Q13207 712 aaPredicted RBP12.5□□□□□ -0.41
SSBP3-214ENST00000533209 EIF4EBP2Q13542 120 aaPredicted RBP12.5□□□□□ -0.41
SSBP3-214ENST00000533209 ARID5BQ14865 1188 aa12.5□□□□□ -0.41
SSBP3-214ENST00000533209 DHCR24Q15392 516 aa12.5□□□□□ -0.41
SSBP3-214ENST00000533209 GAB4Q2WGN9 574 aa12.5□□□□□ -0.41
SSBP3-214ENST00000533209 DCAF6Q58WW2 860 aa12.5□□□□□ -0.41
SSBP3-214ENST00000533209 FAM102AQ5T9C2 384 aaPredicted RBP12.5□□□□□ -0.41
SSBP3-214ENST00000533209 ACAD10Q6JQN1 1059 aa12.5□□□□□ -0.41
SSBP3-214ENST00000533209 RHBDF2Q6PJF5 856 aa12.5□□□□□ -0.41
SSBP3-214ENST00000533209 TXNDC11Q6PKC3 985 aa12.5□□□□□ -0.41
SSBP3-214ENST00000533209 RALGPS2Q86X27 583 aaPredicted RBP12.5□□□□□ -0.41
SSBP3-214ENST00000533209 FBXL6Q8N531 539 aa12.5□□□□□ -0.41
SSBP3-214ENST00000533209 ADAM32Q8TC27 787 aa12.5□□□□□ -0.41
SSBP3-214ENST00000533209 MSANTD3Q96H12 275 aa12.5□□□□□ -0.41
SSBP3-214ENST00000533209 SLC39A13Q96H72 371 aa12.5□□□□□ -0.41
SSBP3-214ENST00000533209 SERPINB11Q96P15 392 aa12.5□□□□□ -0.41
SSBP3-214ENST00000533209 LRFN3Q9BTN0 628 aa12.5□□□□□ -0.41
SSBP3-214ENST00000533209 FOXQ1Q9C009 403 aa12.5□□□□□ -0.41
SSBP3-214ENST00000533209 MFSD1Q9H3U5 465 aa12.5□□□□□ -0.41
SSBP3-214ENST00000533209 LTB4R2Q9NPC1 389 aa12.5□□□□□ -0.41
SSBP3-214ENST00000533209 ADAM22Q9P0K1 906 aa12.5□□□□□ -0.41
SSBP3-214ENST00000533209 TMEM59LQ9UK28 342 aa12.5□□□□□ -0.41
SSBP3-214ENST00000533209 AGO1Q9UL18 857 aaKnown RBP12.5□□□□□ -0.41
SSBP3-214ENST00000533209 ZNF510Q9Y2H8 683 aa12.5□□□□□ -0.41
SSBP3-214ENST00000533209 BZW2Q9Y6E2 419 aaKnown RBP12.5□□□□□ -0.41
SSBP3-214ENST00000533209 ZDBF2Q9HCK1 2354 aa12.49□□□□□ -0.41
SSBP3-214ENST00000533209 MAN2B1O00754 1011 aa12.49□□□□□ -0.41
SSBP3-214ENST00000533209 IRAK2O43187 625 aa12.49□□□□□ -0.41
SSBP3-214ENST00000533209 PI15O43692 258 aa12.49□□□□□ -0.41
SSBP3-214ENST00000533209 CALB1P05937 261 aa12.49□□□□□ -0.41
SSBP3-214ENST00000533209 GJA4P35212 333 aa12.49□□□□□ -0.41
SSBP3-214ENST00000533209 NOS2P35228 1153 aa12.49□□□□□ -0.41
SSBP3-214ENST00000533209 MATKP42679 507 aa12.49□□□□□ -0.41
SSBP3-214ENST00000533209 GSCP56915 257 aaPredicted RBP12.49□□□□□ -0.41
SSBP3-214ENST00000533209 TBX4P57082 545 aa12.49□□□□□ -0.41
SSBP3-214ENST00000533209 RNASE9P60153 205 aaKnown RBP12.49□□□□□ -0.41
SSBP3-214ENST00000533209 CDK17Q00537 523 aa12.49□□□□□ -0.41
SSBP3-214ENST00000533209 C1QBPQ07021 282 aaKnown RBP12.49□□□□□ -0.41
SSBP3-214ENST00000533209 NR1H3Q13133 447 aa12.49□□□□□ -0.41
SSBP3-214ENST00000533209 NNTQ13423 1086 aa12.49□□□□□ -0.41
SSBP3-214ENST00000533209 TDRD12Q587J7 1177 aaKnown RBP12.49□□□□□ -0.41
SSBP3-214ENST00000533209 LY6G5CQ5SRR4 150 aa12.49□□□□□ -0.41
SSBP3-214ENST00000533209 OTUD1Q5VV17 481 aaPredicted RBP12.49□□□□□ -0.41
SSBP3-214ENST00000533209 NAIF1Q69YI7 327 aaPredicted RBP12.49□□□□□ -0.41
SSBP3-214ENST00000533209 ASTLQ6HA08 431 aaPredicted RBP12.49□□□□□ -0.41
SSBP3-214ENST00000533209 TRNP1Q6NT89 227 aa12.49□□□□□ -0.41
SSBP3-214ENST00000533209 ZNF852Q6ZMS4 543 aa12.49□□□□□ -0.41
SSBP3-214ENST00000533209 ARCQ7LC44 396 aa12.49□□□□□ -0.41
SSBP3-214ENST00000533209 TMC6Q7Z403 805 aa12.49□□□□□ -0.41
SSBP3-214ENST00000533209 PHLDB2Q86SQ0 1253 aa12.49□□□□□ -0.41
SSBP3-214ENST00000533209 TMEM25Q86YD3 366 aa12.49□□□□□ -0.41
SSBP3-214ENST00000533209 DENND1CQ8IV53 801 aa12.49□□□□□ -0.41
SSBP3-214ENST00000533209 MCOLN2Q8IZK6 566 aa12.49□□□□□ -0.41
SSBP3-214ENST00000533209 ZNF687Q8N1G0 1237 aa12.49□□□□□ -0.41
SSBP3-214ENST00000533209 FLCNQ8NFG4 579 aa12.49□□□□□ -0.41
SSBP3-214ENST00000533209 OR8K1Q8NGG5 319 aa12.49□□□□□ -0.41
SSBP3-214ENST00000533209 FAM3CQ92520 227 aa12.49□□□□□ -0.41
SSBP3-214ENST00000533209 NT5C3BQ969T7 300 aa12.49□□□□□ -0.41
SSBP3-214ENST00000533209 MRFAP1L1Q96HT8 127 aa12.49□□□□□ -0.41
SSBP3-214ENST00000533209 FCRL2Q96LA5 508 aaPredicted RBP12.49□□□□□ -0.41
SSBP3-214ENST00000533209 ADAM33Q9BZ11 813 aa12.49□□□□□ -0.41
SSBP3-214ENST00000533209 SPHK2Q9NRA0 654 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms