RNA–Protein interactions for RNA: ENST00000528280.1

CHD7-208, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-208ENST00000528280 MIB1Q86YT6 1006 aa10.06□□□□□ -0.8
CHD7-208ENST00000528280 ETFBKMTQ8IXQ9 262 aa10.06□□□□□ -0.8
CHD7-208ENST00000528280 TSTD1Q8NFU3 115 aa10.06□□□□□ -0.8
CHD7-208ENST00000528280 UBA3Q8TBC4 463 aa10.06□□□□□ -0.8
CHD7-208ENST00000528280 STK32AQ8WU08 396 aa10.06□□□□□ -0.8
CHD7-208ENST00000528280 PLD4Q96BZ4 506 aa10.06□□□□□ -0.8
CHD7-208ENST00000528280 ULBP1Q9BZM6 244 aa10.06□□□□□ -0.8
CHD7-208ENST00000528280 INTS2Q9H0H0 1204 aaKnown RBP10.06□□□□□ -0.8
CHD7-208ENST00000528280 RASAL2Q9UJF2 1139 aa10.06□□□□□ -0.8
CHD7-208ENST00000528280 CDV3Q9UKY7 258 aaKnown RBP10.06□□□□□ -0.8
CHD7-208ENST00000528280 SLC12A8A0AV02 714 aa10.05□□□□□ -0.8
CHD7-208ENST00000528280 RNF225M0QZC1 329 aaPredicted RBP10.05□□□□□ -0.8
CHD7-208ENST00000528280 TIMM44O43615 452 aa10.05□□□□□ -0.8
CHD7-208ENST00000528280 CACNG3O60359 315 aa10.05□□□□□ -0.8
CHD7-208ENST00000528280 GREM1O60565 184 aa10.05□□□□□ -0.8
CHD7-208ENST00000528280 LATS1O95835 1130 aa10.05□□□□□ -0.8
CHD7-208ENST00000528280 KRT5P13647 590 aa10.05□□□□□ -0.8
CHD7-208ENST00000528280 TYRP14679 529 aa10.05□□□□□ -0.8
CHD7-208ENST00000528280 ZNF132P52740 706 aa10.05□□□□□ -0.8
CHD7-208ENST00000528280 SEC13P55735 322 aa10.05□□□□□ -0.8
CHD7-208ENST00000528280 DMWDQ09019 674 aa10.05□□□□□ -0.8
CHD7-208ENST00000528280 ELF2Q15723 593 aa10.05□□□□□ -0.8
CHD7-208ENST00000528280 CSRP2Q16527 193 aa10.05□□□□□ -0.8
CHD7-208ENST00000528280 EXOC3L4Q17RC7 722 aa10.05□□□□□ -0.8
CHD7-208ENST00000528280 PKDCCQ504Y2 493 aa10.05□□□□□ -0.8
CHD7-208ENST00000528280 PKN3Q6P5Z2 889 aa10.05□□□□□ -0.8
CHD7-208ENST00000528280 Q6ZNB5 142 aa10.05□□□□□ -0.8
CHD7-208ENST00000528280 UNC45BQ8IWX7 931 aa10.05□□□□□ -0.8
CHD7-208ENST00000528280 CPXM2Q8N436 756 aa10.05□□□□□ -0.8
CHD7-208ENST00000528280 NAT16Q8N8M0 369 aa10.05□□□□□ -0.8
CHD7-208ENST00000528280 RBBP8NLQ8NC74 664 aaPredicted RBP10.05□□□□□ -0.8
CHD7-208ENST00000528280 EZH1Q92800 747 aaPredicted RBP10.05□□□□□ -0.8
CHD7-208ENST00000528280 CNOT6LQ96LI5 555 aaKnown RBP10.05□□□□□ -0.8
CHD7-208ENST00000528280 MED15Q96RN5 788 aa10.05□□□□□ -0.8
CHD7-208ENST00000528280 DDX50Q9BQ39 737 aaKnown RBP10.05□□□□□ -0.8
CHD7-208ENST00000528280 SLC2A11Q9BYW1 496 aa10.05□□□□□ -0.8
CHD7-208ENST00000528280 NUP62CLQ9H1M0 184 aa10.05□□□□□ -0.8
CHD7-208ENST00000528280 DNAJC17Q9NVM6 304 aaKnown RBP10.05□□□□□ -0.8
CHD7-208ENST00000528280 NUDT5Q9UKK9 219 aa10.05□□□□□ -0.8
CHD7-208ENST00000528280 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.05□□□□□ -0.8
CHD7-208ENST00000528280 PCDHGA5Q9Y5G8 931 aa10.05□□□□□ -0.8
CHD7-208ENST00000528280 ASPMQ8IZT6 3477 aa10.05□□□□□ -0.8
CHD7-208ENST00000528280 ZFYVE26Q68DK2 2539 aa10.05□□□□□ -0.8
CHD7-208ENST00000528280 NEDD8-MDP1E9PL57 170 aa10.04□□□□□ -0.8
CHD7-208ENST00000528280 M0QYV0 167 aa10.04□□□□□ -0.8
CHD7-208ENST00000528280 GFRA2O00451 464 aa10.04□□□□□ -0.8
CHD7-208ENST00000528280 SCAMP3O14828 347 aaKnown RBP10.04□□□□□ -0.8
CHD7-208ENST00000528280 KLF8O95600 359 aaPredicted RBP10.04□□□□□ -0.8
CHD7-208ENST00000528280 LCP1P13796 627 aa10.04□□□□□ -0.8
CHD7-208ENST00000528280 NTSR1P30989 418 aa10.04□□□□□ -0.8
CHD7-208ENST00000528280 CORO1AP31146 461 aaKnown RBP10.04□□□□□ -0.8
CHD7-208ENST00000528280 TIE1P35590 1138 aa10.04□□□□□ -0.8
CHD7-208ENST00000528280 KIR2DL1P43626 348 aaPredicted RBP10.04□□□□□ -0.8
CHD7-208ENST00000528280 DGKGP49619 791 aa10.04□□□□□ -0.8
CHD7-208ENST00000528280 DAOAP59103 153 aa10.04□□□□□ -0.8
CHD7-208ENST00000528280 BPIFB4P59827 614 aa10.04□□□□□ -0.8
CHD7-208ENST00000528280 ADIGQ0VDE8 80 aa10.04□□□□□ -0.8
CHD7-208ENST00000528280 TRIP4Q15650 581 aaPredicted RBP10.04□□□□□ -0.8
CHD7-208ENST00000528280 MAN2A1Q16706 1144 aa10.04□□□□□ -0.8
CHD7-208ENST00000528280 MPPE1Q53F39 396 aa10.04□□□□□ -0.8
CHD7-208ENST00000528280 NAIF1Q69YI7 327 aaPredicted RBP10.04□□□□□ -0.8
CHD7-208ENST00000528280 PMF1Q6P1K2 205 aa10.04□□□□□ -0.8
CHD7-208ENST00000528280 TPGS1Q6ZTW0 290 aa10.04□□□□□ -0.8
CHD7-208ENST00000528280 BEND5Q7L4P6 421 aa10.04□□□□□ -0.8
CHD7-208ENST00000528280 RASSF3Q86WH2 238 aa10.04□□□□□ -0.8
CHD7-208ENST00000528280 CCDC33Q8N5R6 958 aa10.04□□□□□ -0.8
CHD7-208ENST00000528280 FAM160A2Q8N612 972 aaPredicted RBP10.04□□□□□ -0.8
CHD7-208ENST00000528280 ZNF557Q8N988 423 aaPredicted RBP10.04□□□□□ -0.8
CHD7-208ENST00000528280 TERB1Q8NA31 727 aa10.04□□□□□ -0.8
CHD7-208ENST00000528280 IL17RCQ8NAC3 791 aa10.04□□□□□ -0.8
CHD7-208ENST00000528280 TXNDC5Q8NBS9 432 aaKnown RBP10.04□□□□□ -0.8
CHD7-208ENST00000528280 UCMAQ8WVF2 138 aa10.04□□□□□ -0.8
CHD7-208ENST00000528280 TFAP2BQ92481 460 aa10.04□□□□□ -0.8
CHD7-208ENST00000528280 AZIN2Q96A70 460 aa10.04□□□□□ -0.8
CHD7-208ENST00000528280 HHIPQ96QV1 700 aa10.04□□□□□ -0.8
CHD7-208ENST00000528280 TMEM51Q9NW97 253 aa10.04□□□□□ -0.8
CHD7-208ENST00000528280 C2orf42Q9NWW7 574 aa10.04□□□□□ -0.8
CHD7-208ENST00000528280 APEX2Q9UBZ4 518 aa10.04□□□□□ -0.8
CHD7-208ENST00000528280 FBXO10Q9UK96 956 aa10.04□□□□□ -0.8
CHD7-208ENST00000528280 USP18Q9UMW8 372 aa10.04□□□□□ -0.8
CHD7-208ENST00000528280 SLC27A6Q9Y2P4 619 aa10.04□□□□□ -0.8
CHD7-208ENST00000528280 ZZEF1O43149 2961 aa10.04□□□□□ -0.8
CHD7-208ENST00000528280 FRYQ5TBA9 3013 aa10.04□□□□□ -0.8
CHD7-208ENST00000528280 CNOT1A5YKK6 2376 aaKnown RBP10.03□□□□□ -0.8
CHD7-208ENST00000528280 YJEFN3A6XGL0 299 aa10.03□□□□□ -0.8
CHD7-208ENST00000528280 E7ENQ6 273 aa10.03□□□□□ -0.8
CHD7-208ENST00000528280 MDM4O15151 490 aa10.03□□□□□ -0.8
CHD7-208ENST00000528280 PENKP01210 267 aaPredicted RBP10.03□□□□□ -0.8
CHD7-208ENST00000528280 KLKB1P03952 638 aa10.03□□□□□ -0.8
CHD7-208ENST00000528280 TPM2P07951 284 aa10.03□□□□□ -0.8
CHD7-208ENST00000528280 HMBSP08397 361 aa10.03□□□□□ -0.8
CHD7-208ENST00000528280 HNRNPLP14866 589 aaKnown RBP eCLIP10.03□□□□□ -0.8
CHD7-208ENST00000528280 TGM1P22735 817 aa10.03□□□□□ -0.8
CHD7-208ENST00000528280 DPP6P42658 865 aa10.03□□□□□ -0.8
CHD7-208ENST00000528280 GPD2P43304 727 aa10.03□□□□□ -0.8
CHD7-208ENST00000528280 PXNP49023 591 aaPredicted RBP10.03□□□□□ -0.8
CHD7-208ENST00000528280 RPL34P49207 117 aaKnown RBP10.03□□□□□ -0.8
CHD7-208ENST00000528280 SLC11A2P49281 568 aa10.03□□□□□ -0.8
CHD7-208ENST00000528280 PTK2Q05397 1052 aa10.03□□□□□ -0.8
CHD7-208ENST00000528280 KDSRQ06136 332 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms