RNA–Protein interactions for RNA: ENST00000525685.5

CD44-219, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-219ENST00000525685 MAVSQ7Z434 540 aa4.53□□□□□ -1.68
CD44-219ENST00000525685 TTC30AQ86WT1 665 aa4.53□□□□□ -1.68
CD44-219ENST00000525685 SPICE1Q8N0Z3 855 aa4.53□□□□□ -1.68
CD44-219ENST00000525685 FSTL5Q8N475 847 aaPredicted RBP4.53□□□□□ -1.68
CD44-219ENST00000525685 VGLL2Q8N8G2 317 aa4.53□□□□□ -1.68
CD44-219ENST00000525685 ENAHQ8N8S7 591 aaPredicted RBP4.53□□□□□ -1.68
CD44-219ENST00000525685 ZNF527Q8NB42 609 aa4.53□□□□□ -1.68
CD44-219ENST00000525685 NGDNQ8NEJ9 315 aaKnown RBP4.53□□□□□ -1.68
CD44-219ENST00000525685 SARAFQ96BY9 339 aa4.53□□□□□ -1.68
CD44-219ENST00000525685 GRAMD1AQ96CP6 724 aa4.53□□□□□ -1.68
CD44-219ENST00000525685 LTV1Q96GA3 475 aaPredicted RBP4.53□□□□□ -1.68
CD44-219ENST00000525685 HAPLN3Q96S86 360 aa4.53□□□□□ -1.68
CD44-219ENST00000525685 TRIM5Q9C035 493 aa4.53□□□□□ -1.68
CD44-219ENST00000525685 SLC25A32Q9H2D1 315 aa4.53□□□□□ -1.68
CD44-219ENST00000525685 DNAJB11Q9UBS4 358 aa4.53□□□□□ -1.68
CD44-219ENST00000525685 DKK4Q9UBT3 224 aa4.53□□□□□ -1.68
CD44-219ENST00000525685 TAGLN3Q9UI15 199 aa4.53□□□□□ -1.68
CD44-219ENST00000525685 DRG1Q9Y295 367 aaKnown RBP4.53□□□□□ -1.68
CD44-219ENST00000525685 NLRP1Q9C000 1473 aa4.53□□□□□ -1.68
CD44-219ENST00000525685 NOS1P29475 1434 aa4.53□□□□□ -1.68
CD44-219ENST00000525685 STRCQ7RTU9 1775 aa4.53□□□□□ -1.69
CD44-219ENST00000525685 UGGT1Q9NYU2 1555 aa4.53□□□□□ -1.69
CD44-219ENST00000525685 NUP155O75694 1391 aa4.53□□□□□ -1.69
CD44-219ENST00000525685 ADGRB3O60242 1522 aa4.52□□□□□ -1.69
CD44-219ENST00000525685 PLA2R1Q13018 1463 aa4.52□□□□□ -1.69
CD44-219ENST00000525685 KAT6AQ92794 2004 aa4.52□□□□□ -1.69
CD44-219ENST00000525685 LINC00473A8K010 186 aa4.52□□□□□ -1.69
CD44-219ENST00000525685 CLCA1A8K7I4 914 aa4.52□□□□□ -1.69
CD44-219ENST00000525685 ADAMTS3O15072 1205 aa4.52□□□□□ -1.69
CD44-219ENST00000525685 PRKCBP05771 671 aa4.52□□□□□ -1.69
CD44-219ENST00000525685 DLDP09622 509 aaKnown RBP4.52□□□□□ -1.69
CD44-219ENST00000525685 FAM163BP0C2L3 166 aa4.52□□□□□ -1.69
CD44-219ENST00000525685 SRGAP2BP0DMP2 458 aa4.52□□□□□ -1.69
CD44-219ENST00000525685 CD19P15391 556 aa4.52□□□□□ -1.69
CD44-219ENST00000525685 LMO1P25800 156 aa4.52□□□□□ -1.69
CD44-219ENST00000525685 ITPKBP27987 946 aa4.52□□□□□ -1.69
CD44-219ENST00000525685 CYP2C18P33260 490 aa4.52□□□□□ -1.69
CD44-219ENST00000525685 ATXN1P54253 815 aaKnown RBP4.52□□□□□ -1.69
CD44-219ENST00000525685 HSPA2P54652 639 aa4.52□□□□□ -1.69
CD44-219ENST00000525685 FOXF2Q12947 444 aa4.52□□□□□ -1.69
CD44-219ENST00000525685 GPS1Q13098 491 aa4.52□□□□□ -1.69
CD44-219ENST00000525685 HNRNPA0Q13151 305 aaKnown RBP4.52□□□□□ -1.69
CD44-219ENST00000525685 ELF2Q15723 593 aa4.52□□□□□ -1.69
CD44-219ENST00000525685 TBC1D25Q3MII6 688 aa4.52□□□□□ -1.69
CD44-219ENST00000525685 C10orf62Q5T681 223 aaPredicted RBP4.52□□□□□ -1.69
CD44-219ENST00000525685 USP17L6PQ6QN14 398 aa4.52□□□□□ -1.69
CD44-219ENST00000525685 ZNF551Q7Z340 670 aaPredicted RBP4.52□□□□□ -1.69
CD44-219ENST00000525685 SRRM1Q8IYB3 904 aaKnown RBP4.52□□□□□ -1.69
CD44-219ENST00000525685 C11orf44Q8N8P7 122 aa4.52□□□□□ -1.69
CD44-219ENST00000525685 PCDHAC1Q9H158 963 aa4.52□□□□□ -1.69
CD44-219ENST00000525685 CPNE5Q9HCH3 593 aa4.52□□□□□ -1.69
CD44-219ENST00000525685 ZBTB26Q9HCK0 441 aa4.52□□□□□ -1.69
CD44-219ENST00000525685 NKX1-2Q9UD57 310 aaPredicted RBP4.52□□□□□ -1.69
CD44-219ENST00000525685 SLC39A10Q9ULF5 831 aa4.52□□□□□ -1.69
CD44-219ENST00000525685 ZMYND8Q9ULU4 1186 aaPredicted RBP4.52□□□□□ -1.69
CD44-219ENST00000525685 SETD5Q9C0A6 1442 aa4.52□□□□□ -1.69
CD44-219ENST00000525685 NEURL4Q96JN8 1562 aa4.52□□□□□ -1.69
CD44-219ENST00000525685 POLR1AO95602 1720 aaPredicted RBP4.52□□□□□ -1.69
CD44-219ENST00000525685 RAB3GAP2Q9H2M9 1393 aa4.52□□□□□ -1.69
CD44-219ENST00000525685 TRPM2O94759 1503 aa4.51□□□□□ -1.69
CD44-219ENST00000525685 KDM5AP29375 1690 aaKnown RBP4.51□□□□□ -1.69
CD44-219ENST00000525685 ABHD14A-ACY1A0A1B0GW23 586 aa4.51□□□□□ -1.69
CD44-219ENST00000525685 FAM234BA2RU67 622 aa4.51□□□□□ -1.69
CD44-219ENST00000525685 INO80B-WBP1J3KQ70 363 aa4.51□□□□□ -1.69
CD44-219ENST00000525685 AP4M1O00189 453 aa4.51□□□□□ -1.69
CD44-219ENST00000525685 CES2O00748 559 aa4.51□□□□□ -1.69
CD44-219ENST00000525685 ZSCAN9O15535 394 aaPredicted RBP4.51□□□□□ -1.69
CD44-219ENST00000525685 FFAR2O15552 330 aa4.51□□□□□ -1.69
CD44-219ENST00000525685 IL6RP08887 468 aaPredicted RBP4.51□□□□□ -1.69
CD44-219ENST00000525685 ENGP17813 658 aa4.51□□□□□ -1.69
CD44-219ENST00000525685 GPD1P21695 349 aa4.51□□□□□ -1.69
CD44-219ENST00000525685 NTSR1P30989 418 aa4.51□□□□□ -1.69
CD44-219ENST00000525685 CCT8P50990 548 aa4.51□□□□□ -1.69
CD44-219ENST00000525685 SOX10P56693 466 aa4.51□□□□□ -1.69
CD44-219ENST00000525685 SUMO2P61956 95 aaKnown RBP4.51□□□□□ -1.69
CD44-219ENST00000525685 TNFAIP2Q03169 654 aa4.51□□□□□ -1.69
CD44-219ENST00000525685 TRIM14Q14142 442 aa4.51□□□□□ -1.69
CD44-219ENST00000525685 MPEG1Q2M385 716 aa4.51□□□□□ -1.69
CD44-219ENST00000525685 P3H1Q32P28 736 aa4.51□□□□□ -1.69
CD44-219ENST00000525685 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.51□□□□□ -1.69
CD44-219ENST00000525685 TSTD2Q5T7W7 516 aa4.51□□□□□ -1.69
CD44-219ENST00000525685 MANEALQ5VSG8 457 aa4.51□□□□□ -1.69
CD44-219ENST00000525685 ZNF788Q6ZQV5 615 aa4.51□□□□□ -1.69
CD44-219ENST00000525685 USP49Q70CQ1 688 aa4.51□□□□□ -1.69
CD44-219ENST00000525685 PARS2Q7L3T8 475 aaKnown RBP4.51□□□□□ -1.69
CD44-219ENST00000525685 SIRT6Q8N6T7 355 aa4.51□□□□□ -1.69
CD44-219ENST00000525685 ABHD11Q8NFV4 315 aa4.51□□□□□ -1.69
CD44-219ENST00000525685 ABHD5Q8WTS1 349 aa4.51□□□□□ -1.69
CD44-219ENST00000525685 POF1BQ8WVV4 589 aa4.51□□□□□ -1.69
CD44-219ENST00000525685 VPS50Q96JG6 964 aa4.51□□□□□ -1.69
CD44-219ENST00000525685 SETD1BQ9UPS6 1966 aaKnown RBP4.51□□□□□ -1.69
CD44-219ENST00000525685 CFAP65Q6ZU64 1925 aaKnown RBP4.5□□□□□ -1.69
CD44-219ENST00000525685 CLTCL1P53675 1640 aa4.5□□□□□ -1.69
CD44-219ENST00000525685 ARHGAP23Q9P227 1491 aa4.5□□□□□ -1.69
CD44-219ENST00000525685 PTPRTO14522 1441 aa4.5□□□□□ -1.69
CD44-219ENST00000525685 WIPF3A6NGB9 483 aa4.5□□□□□ -1.69
CD44-219ENST00000525685 CGB1A6NKQ9 187 aa4.5□□□□□ -1.69
CD44-219ENST00000525685 EXOC5O00471 708 aa4.5□□□□□ -1.69
CD44-219ENST00000525685 ERBB2P04626 1255 aa4.5□□□□□ -1.69
CD44-219ENST00000525685 NPSP0C0P6 89 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms