RNA–Protein interactions for RNA: ENST00000513960.5

VCAN-210, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 3,973 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-210ENST00000513960 PPIDQ08752 370 aaKnown RBP9.98□□□□□ -0.81
VCAN-210ENST00000513960 TBL3Q12788 808 aaKnown RBP9.98□□□□□ -0.81
VCAN-210ENST00000513960 FSTL1Q12841 308 aa9.98□□□□□ -0.81
VCAN-210ENST00000513960 KRT72Q14CN4 511 aa9.98□□□□□ -0.81
VCAN-210ENST00000513960 OASLQ15646 514 aaKnown RBP9.98□□□□□ -0.81
VCAN-210ENST00000513960 HADHQ16836 314 aaKnown RBP9.98□□□□□ -0.81
VCAN-210ENST00000513960 DUOXA2Q1HG44 320 aa9.98□□□□□ -0.81
VCAN-210ENST00000513960 TFDP3Q5H9I0 405 aa9.98□□□□□ -0.81
VCAN-210ENST00000513960 KLC3Q6P597 504 aa9.98□□□□□ -0.81
VCAN-210ENST00000513960 PAOXQ6QHF9 649 aa9.98□□□□□ -0.81
VCAN-210ENST00000513960 ZPBP2Q6X784 338 aa9.98□□□□□ -0.81
VCAN-210ENST00000513960 BRSK2Q8IWQ3 736 aa9.98□□□□□ -0.81
VCAN-210ENST00000513960 EMC1Q8N766 993 aa9.98□□□□□ -0.81
VCAN-210ENST00000513960 ERLEC1Q96DZ1 483 aa9.98□□□□□ -0.81
VCAN-210ENST00000513960 IFT43Q96FT9 208 aa9.98□□□□□ -0.81
VCAN-210ENST00000513960 CATSPER2Q96P56 530 aa9.98□□□□□ -0.81
VCAN-210ENST00000513960 PHF24Q9UPV7 400 aa9.98□□□□□ -0.81
VCAN-210ENST00000513960 SNRPAP09012 282 aaKnown RBP9.97□□□□□ -0.81
VCAN-210ENST00000513960 TMEM191BP0C7N4 346 aa9.97□□□□□ -0.81
VCAN-210ENST00000513960 SAT1P21673 171 aa9.97□□□□□ -0.81
VCAN-210ENST00000513960 TCF7P36402 384 aaPredicted RBP9.97□□□□□ -0.81
VCAN-210ENST00000513960 MRPS22P82650 360 aaKnown RBP9.97□□□□□ -0.81
VCAN-210ENST00000513960 PRKD1Q15139 912 aaPredicted RBP9.97□□□□□ -0.81
VCAN-210ENST00000513960 ZNF568Q3ZCX4 644 aa9.97□□□□□ -0.81
VCAN-210ENST00000513960 CDHR3Q6ZTQ4 885 aa9.97□□□□□ -0.81
VCAN-210ENST00000513960 SPATA18Q8TC71 538 aa9.97□□□□□ -0.81
VCAN-210ENST00000513960 CPT1BQ92523 772 aa9.97□□□□□ -0.81
VCAN-210ENST00000513960 USP13Q92995 863 aaPredicted RBP9.97□□□□□ -0.81
VCAN-210ENST00000513960 FAM167AQ96KS9 214 aa9.97□□□□□ -0.81
VCAN-210ENST00000513960 DCUN1D5Q9BTE7 237 aa9.97□□□□□ -0.81
VCAN-210ENST00000513960 MTMR12Q9C0I1 747 aa9.97□□□□□ -0.81
VCAN-210ENST00000513960 LIN28AQ9H9Z2 209 aaKnown RBP9.97□□□□□ -0.81
VCAN-210ENST00000513960 KCNK13Q9HB14 408 aa9.97□□□□□ -0.81
VCAN-210ENST00000513960 XAB2Q9HCS7 855 aaKnown RBP9.97□□□□□ -0.81
VCAN-210ENST00000513960 KCNK4Q9NYG8 393 aa9.97□□□□□ -0.81
VCAN-210ENST00000513960 BTBD7Q9P203 1132 aa9.97□□□□□ -0.81
VCAN-210ENST00000513960 AFG3L2Q9Y4W6 797 aa9.97□□□□□ -0.81
VCAN-210ENST00000513960 RPS6KL1Q9Y6S9 549 aa9.97□□□□□ -0.81
VCAN-210ENST00000513960 ARHGAP10A1A4S6 786 aa9.97□□□□□ -0.81
VCAN-210ENST00000513960 TMEM63AO94886 807 aa9.97□□□□□ -0.81
VCAN-210ENST00000513960 SURF1Q15526 300 aa9.97□□□□□ -0.81
VCAN-210ENST00000513960 MAP3K21Q5TCX8 1036 aa9.97□□□□□ -0.81
VCAN-210ENST00000513960 VWA5B1Q5TIE3 1220 aa9.97□□□□□ -0.81
VCAN-210ENST00000513960 KRT80Q6KB66 452 aa9.97□□□□□ -0.81
VCAN-210ENST00000513960 ADGRD1Q6QNK2 874 aa9.97□□□□□ -0.81
VCAN-210ENST00000513960 WDR49Q8IV35 697 aa9.97□□□□□ -0.81
VCAN-210ENST00000513960 UNC45BQ8IWX7 931 aa9.97□□□□□ -0.81
VCAN-210ENST00000513960 HSPBAP1Q96EW2 488 aa9.97□□□□□ -0.81
VCAN-210ENST00000513960 MPHOSPH6Q99547 160 aaKnown RBP9.97□□□□□ -0.81
VCAN-210ENST00000513960 CAAP1Q9H8G2 361 aa9.97□□□□□ -0.81
VCAN-210ENST00000513960 MAN1C1Q9NR34 630 aa9.97□□□□□ -0.81
VCAN-210ENST00000513960 PIH1D1Q9NWS0 290 aaKnown RBP9.97□□□□□ -0.81
VCAN-210ENST00000513960 PAIP2BQ9ULR5 123 aaKnown RBP9.97□□□□□ -0.81
VCAN-210ENST00000513960 CNTNAP2Q9UHC6 1331 aa9.97□□□□□ -0.81
VCAN-210ENST00000513960 GOLGA8QA0A0J9YX86 632 aa9.97□□□□□ -0.81
VCAN-210ENST00000513960 GOLGA8OA6NCC3 632 aa9.97□□□□□ -0.81
VCAN-210ENST00000513960 F8W8V4 182 aa9.97□□□□□ -0.81
VCAN-210ENST00000513960 GOLGA8NF8WBI6 632 aa9.97□□□□□ -0.81
VCAN-210ENST00000513960 FZD9O00144 591 aa9.97□□□□□ -0.81
VCAN-210ENST00000513960 FARP2O94887 1054 aaPredicted RBP9.97□□□□□ -0.81
VCAN-210ENST00000513960 CST3P01034 146 aaPredicted RBP9.97□□□□□ -0.81
VCAN-210ENST00000513960 ENO3P13929 434 aaPredicted RBP9.97□□□□□ -0.81
VCAN-210ENST00000513960 KLF1Q13351 362 aaPredicted RBP9.97□□□□□ -0.81
VCAN-210ENST00000513960 NADK2Q4G0N4 442 aa9.97□□□□□ -0.81
VCAN-210ENST00000513960 ANKRD20A4Q4UJ75 823 aa9.97□□□□□ -0.81
VCAN-210ENST00000513960 TTC39BQ5VTQ0 682 aaPredicted RBP9.97□□□□□ -0.81
VCAN-210ENST00000513960 POTEAQ6S8J7 498 aa9.97□□□□□ -0.81
VCAN-210ENST00000513960 RNF149Q8NC42 400 aa9.97□□□□□ -0.81
VCAN-210ENST00000513960 DGCR14Q96DF8 476 aaKnown RBP9.97□□□□□ -0.81
VCAN-210ENST00000513960 CCT7Q99832 543 aa9.97□□□□□ -0.81
VCAN-210ENST00000513960 COPS7BQ9H9Q2 264 aaPredicted RBP9.97□□□□□ -0.81
VCAN-210ENST00000513960 ADAMTS6Q9UKP5 1117 aa9.97□□□□□ -0.81
VCAN-210ENST00000513960 PHIPQ8WWQ0 1821 aa9.96□□□□□ -0.81
VCAN-210ENST00000513960 DCXO43602 365 aa9.96□□□□□ -0.81
VCAN-210ENST00000513960 UGT1A9O60656 530 aa9.96□□□□□ -0.81
VCAN-210ENST00000513960 KRT38O76015 456 aa9.96□□□□□ -0.81
VCAN-210ENST00000513960 ASS1P00966 412 aaKnown RBP9.96□□□□□ -0.81
VCAN-210ENST00000513960 KRT19P08727 400 aa9.96□□□□□ -0.81
VCAN-210ENST00000513960 MMP8P22894 467 aa9.96□□□□□ -0.81
VCAN-210ENST00000513960 SERPINB5P36952 375 aa9.96□□□□□ -0.81
VCAN-210ENST00000513960 TNFSF9P41273 254 aa9.96□□□□□ -0.81
VCAN-210ENST00000513960 GRIA2P42262 883 aa9.96□□□□□ -0.81
VCAN-210ENST00000513960 MYL6P60660 151 aa9.96□□□□□ -0.81
VCAN-210ENST00000513960 PRAMEP78395 509 aa9.96□□□□□ -0.81
VCAN-210ENST00000513960 ORC1Q13415 861 aa9.96□□□□□ -0.81
VCAN-210ENST00000513960 C16orf72Q14CZ0 275 aa9.96□□□□□ -0.81
VCAN-210ENST00000513960 RARS2Q5T160 578 aaKnown RBP9.96□□□□□ -0.81
VCAN-210ENST00000513960 IER5Q5VY09 327 aa9.96□□□□□ -0.81
VCAN-210ENST00000513960 NPNTQ6UXI9 565 aa9.96□□□□□ -0.81
VCAN-210ENST00000513960 TRPM4Q8TD43 1214 aa9.96□□□□□ -0.81
VCAN-210ENST00000513960 NIF3L1Q9GZT8 377 aa9.96□□□□□ -0.81
VCAN-210ENST00000513960 UGT1A7Q9HAW7 530 aa9.96□□□□□ -0.81
VCAN-210ENST00000513960 UGT1A10Q9HAW8 530 aa9.96□□□□□ -0.81
VCAN-210ENST00000513960 UGT1A8Q9HAW9 530 aa9.96□□□□□ -0.81
VCAN-210ENST00000513960 CYLDQ9NQC7 956 aa9.96□□□□□ -0.81
VCAN-210ENST00000513960 EURLQ9NYK6 297 aa9.96□□□□□ -0.81
VCAN-210ENST00000513960 NXF1Q9UBU9 619 aaKnown RBP9.96□□□□□ -0.81
VCAN-210ENST00000513960 SMIM31A0A1B0GVY4 71 aa9.96□□□□□ -0.82
VCAN-210ENST00000513960 OGTO15294 1046 aa9.96□□□□□ -0.82
VCAN-210ENST00000513960 PEX10O60683 326 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms