RNA–Protein interactions for RNA: ENST00000508583.5

NUP54-207, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-207ENST00000508583 OLFML1Q6UWY5 402 aa9.54□□□□□ -0.88
NUP54-207ENST00000508583 NUDT18Q6ZVK8 323 aa9.54□□□□□ -0.88
NUP54-207ENST00000508583 FAM183BPQ6ZVS7 135 aa9.54□□□□□ -0.88
NUP54-207ENST00000508583 SND1Q7KZF4 910 aaKnown RBP eCLIP9.54□□□□□ -0.88
NUP54-207ENST00000508583 BHLHA9Q7RTU4 235 aa9.54□□□□□ -0.88
NUP54-207ENST00000508583 BMP8AQ7Z5Y6 402 aa9.54□□□□□ -0.88
NUP54-207ENST00000508583 PHF13Q86YI8 300 aaPredicted RBP9.54□□□□□ -0.88
NUP54-207ENST00000508583 CCDC26Q8TAB7 109 aa9.54□□□□□ -0.88
NUP54-207ENST00000508583 EDEM1Q92611 657 aa9.54□□□□□ -0.88
NUP54-207ENST00000508583 RSPRY1Q96DX4 576 aa9.54□□□□□ -0.88
NUP54-207ENST00000508583 MRFAP1L1Q96HT8 127 aa9.54□□□□□ -0.88
NUP54-207ENST00000508583 ZFRQ96KR1 1074 aaKnown RBP9.54□□□□□ -0.88
NUP54-207ENST00000508583 FAM83CQ9BQN1 747 aa9.54□□□□□ -0.88
NUP54-207ENST00000508583 IRX2Q9BZI1 471 aaPredicted RBP9.54□□□□□ -0.88
NUP54-207ENST00000508583 RBSNQ9H1K0 784 aa9.54□□□□□ -0.88
NUP54-207ENST00000508583 HAUS4Q9H6D7 363 aa9.54□□□□□ -0.88
NUP54-207ENST00000508583 ADAM22Q9P0K1 906 aa9.54□□□□□ -0.88
NUP54-207ENST00000508583 SLC12A6Q9UHW9 1150 aa9.54□□□□□ -0.88
NUP54-207ENST00000508583 CYTH4Q9UIA0 394 aa9.54□□□□□ -0.88
NUP54-207ENST00000508583 CA14Q9ULX7 337 aa9.54□□□□□ -0.88
NUP54-207ENST00000508583 TLR6Q9Y2C9 796 aa9.54□□□□□ -0.88
NUP54-207ENST00000508583 PIAS3Q9Y6X2 628 aa9.54□□□□□ -0.88
NUP54-207ENST00000508583 TYW5A2RUC4 315 aaKnown RBP9.53□□□□□ -0.88
NUP54-207ENST00000508583 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.53□□□□□ -0.88
NUP54-207ENST00000508583 STC2O76061 302 aa9.53□□□□□ -0.88
NUP54-207ENST00000508583 TBX18O95935 607 aa9.53□□□□□ -0.88
NUP54-207ENST00000508583 F9P00740 461 aa9.53□□□□□ -0.88
NUP54-207ENST00000508583 CYBBP04839 570 aa9.53□□□□□ -0.88
NUP54-207ENST00000508583 CHRNB2P17787 502 aa9.53□□□□□ -0.88
NUP54-207ENST00000508583 CORO1AP31146 461 aaKnown RBP9.53□□□□□ -0.88
NUP54-207ENST00000508583 HNRNPH3P31942 346 aaKnown RBP9.53□□□□□ -0.88
NUP54-207ENST00000508583 MATKP42679 507 aa9.53□□□□□ -0.88
NUP54-207ENST00000508583 PGFP49763 221 aa9.53□□□□□ -0.88
NUP54-207ENST00000508583 TBX4P57082 545 aa9.53□□□□□ -0.88
NUP54-207ENST00000508583 STARD6P59095 220 aa9.53□□□□□ -0.88
NUP54-207ENST00000508583 TRIP4Q15650 581 aaPredicted RBP9.53□□□□□ -0.88
NUP54-207ENST00000508583 EML3Q32P44 896 aa9.53□□□□□ -0.88
NUP54-207ENST00000508583 ACAD10Q6JQN1 1059 aa9.53□□□□□ -0.88
NUP54-207ENST00000508583 MMS22LQ6ZRQ5 1243 aa9.53□□□□□ -0.88
NUP54-207ENST00000508583 TPRG1Q6ZUI0 275 aa9.53□□□□□ -0.88
NUP54-207ENST00000508583 XYLT1Q86Y38 959 aa9.53□□□□□ -0.88
NUP54-207ENST00000508583 GPIHBP1Q8IV16 184 aa9.53□□□□□ -0.88
NUP54-207ENST00000508583 ZNF557Q8N988 423 aaPredicted RBP9.53□□□□□ -0.88
NUP54-207ENST00000508583 DQX1Q8TE96 717 aaKnown RBP9.53□□□□□ -0.88
NUP54-207ENST00000508583 CLEC4CQ8WTT0 213 aa9.53□□□□□ -0.88
NUP54-207ENST00000508583 NDRG1Q92597 394 aaKnown RBP9.53□□□□□ -0.88
NUP54-207ENST00000508583 PBXIP1Q96AQ6 731 aa9.53□□□□□ -0.88
NUP54-207ENST00000508583 LRRC3BQ96PB8 259 aa9.53□□□□□ -0.88
NUP54-207ENST00000508583 SLC2A13Q96QE2 648 aa9.53□□□□□ -0.88
NUP54-207ENST00000508583 DNAJC7Q99615 494 aa9.53□□□□□ -0.88
NUP54-207ENST00000508583 IER2Q9BTL4 223 aa9.53□□□□□ -0.88
NUP54-207ENST00000508583 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.53□□□□□ -0.88
NUP54-207ENST00000508583 SELENOOQ9BVL4 669 aa9.53□□□□□ -0.88
NUP54-207ENST00000508583 OSBPL6Q9BZF3 934 aa9.53□□□□□ -0.88
NUP54-207ENST00000508583 DEF6Q9H4E7 631 aa9.53□□□□□ -0.88
NUP54-207ENST00000508583 EBF3Q9H4W6 596 aa9.53□□□□□ -0.88
NUP54-207ENST00000508583 FAM204AQ9H8W3 233 aa9.53□□□□□ -0.88
NUP54-207ENST00000508583 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.53□□□□□ -0.88
NUP54-207ENST00000508583 NUDT5Q9UKK9 219 aa9.53□□□□□ -0.88
NUP54-207ENST00000508583 WNT6Q9Y6F9 365 aa9.53□□□□□ -0.88
NUP54-207ENST00000508583 TICRRQ7Z2Z1 1910 aa9.52□□□□□ -0.88
NUP54-207ENST00000508583 COL4A3Q01955 1670 aa9.52□□□□□ -0.89
NUP54-207ENST00000508583 KANSL1LA0AUZ9 987 aa9.52□□□□□ -0.89
NUP54-207ENST00000508583 FAM86C2PA6NEL3 165 aa9.52□□□□□ -0.89
NUP54-207ENST00000508583 AKR1B15C9JRZ8 316 aaPredicted RBP9.52□□□□□ -0.89
NUP54-207ENST00000508583 SPECC1L-ADORA2AF8WAN1 911 aa9.52□□□□□ -0.89
NUP54-207ENST00000508583 MDM4O15151 490 aa9.52□□□□□ -0.89
NUP54-207ENST00000508583 IRAK2O43187 625 aa9.52□□□□□ -0.89
NUP54-207ENST00000508583 MFAP3LO75121 409 aa9.52□□□□□ -0.89
NUP54-207ENST00000508583 RTN2O75298 545 aa9.52□□□□□ -0.89
NUP54-207ENST00000508583 TECTAO75443 2155 aa9.52□□□□□ -0.89
NUP54-207ENST00000508583 TRUB2O95900 331 aaKnown RBP9.52□□□□□ -0.89
NUP54-207ENST00000508583 HMBSP08397 361 aa9.52□□□□□ -0.89
NUP54-207ENST00000508583 ADH5P11766 374 aa9.52□□□□□ -0.89
NUP54-207ENST00000508583 ABCB4P21439 1286 aa9.52□□□□□ -0.89
NUP54-207ENST00000508583 CCR1P32246 355 aa9.52□□□□□ -0.89
NUP54-207ENST00000508583 CTHP32929 405 aa9.52□□□□□ -0.89
NUP54-207ENST00000508583 EIF2DP41214 584 aaKnown RBP9.52□□□□□ -0.89
NUP54-207ENST00000508583 CLCN5P51795 746 aa9.52□□□□□ -0.89
NUP54-207ENST00000508583 ZNF75DP51815 510 aa9.52□□□□□ -0.89
NUP54-207ENST00000508583 NUBP1P53384 320 aa9.52□□□□□ -0.89
NUP54-207ENST00000508583 GAD2Q05329 585 aa9.52□□□□□ -0.89
NUP54-207ENST00000508583 GRSF1Q12849 480 aaKnown RBP eCLIP9.52□□□□□ -0.89
NUP54-207ENST00000508583 LRRC32Q14392 662 aa9.52□□□□□ -0.89
NUP54-207ENST00000508583 ARID5BQ14865 1188 aa9.52□□□□□ -0.89
NUP54-207ENST00000508583 E2F5Q15329 346 aa9.52□□□□□ -0.89
NUP54-207ENST00000508583 DNAJC24Q6P3W2 148 aa9.52□□□□□ -0.89
NUP54-207ENST00000508583 HFE2Q6ZVN8 426 aa9.52□□□□□ -0.89
NUP54-207ENST00000508583 MON1BQ7L1V2 547 aa9.52□□□□□ -0.89
NUP54-207ENST00000508583 TMC6Q7Z403 805 aa9.52□□□□□ -0.89
NUP54-207ENST00000508583 CPXM2Q8N436 756 aa9.52□□□□□ -0.89
NUP54-207ENST00000508583 FBXL6Q8N531 539 aa9.52□□□□□ -0.89
NUP54-207ENST00000508583 C3orf20Q8ND61 904 aa9.52□□□□□ -0.89
NUP54-207ENST00000508583 SLC30A5Q8TAD4 765 aa9.52□□□□□ -0.89
NUP54-207ENST00000508583 FAM3CQ92520 227 aa9.52□□□□□ -0.89
NUP54-207ENST00000508583 RNF34Q969K3 372 aa9.52□□□□□ -0.89
NUP54-207ENST00000508583 AZIN2Q96A70 460 aa9.52□□□□□ -0.89
NUP54-207ENST00000508583 ASIC4Q96FT7 647 aa9.52□□□□□ -0.89
NUP54-207ENST00000508583 ZFYVE19Q96K21 471 aa9.52□□□□□ -0.89
NUP54-207ENST00000508583 XPO6Q96QU8 1125 aaKnown RBP9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms