RNA–Protein interactions for RNA: ENST00000505998.5

NIPBL-205, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 969 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-205ENST00000505998 EXOC5O00471 708 aa6.66□□□□□ -1.34
NIPBL-205ENST00000505998 CCNT2O60583 730 aaKnown RBP6.66□□□□□ -1.34
NIPBL-205ENST00000505998 EIF5BO60841 1220 aaKnown RBP6.66□□□□□ -1.34
NIPBL-205ENST00000505998 PMPCBO75439 489 aa6.66□□□□□ -1.34
NIPBL-205ENST00000505998 TJP3O95049 919 aa6.66□□□□□ -1.34
NIPBL-205ENST00000505998 SETSIPP0DME0 302 aa6.66□□□□□ -1.34
NIPBL-205ENST00000505998 GKP32189 559 aa6.66□□□□□ -1.34
NIPBL-205ENST00000505998 CLK3P49761 638 aaKnown RBP6.66□□□□□ -1.34
NIPBL-205ENST00000505998 SOX10P56693 466 aa6.66□□□□□ -1.34
NIPBL-205ENST00000505998 E2F1Q01094 437 aa6.66□□□□□ -1.34
NIPBL-205ENST00000505998 GRM1Q13255 1194 aa6.66□□□□□ -1.34
NIPBL-205ENST00000505998 CYP1B1Q16678 543 aa6.66□□□□□ -1.34
NIPBL-205ENST00000505998 MTHFD1LQ6UB35 978 aa6.66□□□□□ -1.34
NIPBL-205ENST00000505998 CLEC9AQ6UXN8 241 aa6.66□□□□□ -1.34
NIPBL-205ENST00000505998 SLC29A4Q7RTT9 530 aa6.66□□□□□ -1.34
NIPBL-205ENST00000505998 ZNF804AQ7Z570 1209 aa6.66□□□□□ -1.34
NIPBL-205ENST00000505998 SKAP1Q86WV1 359 aa6.66□□□□□ -1.34
NIPBL-205ENST00000505998 C11orf44Q8N8P7 122 aa6.66□□□□□ -1.34
NIPBL-205ENST00000505998 TBC1D5Q92609 795 aa6.66□□□□□ -1.34
NIPBL-205ENST00000505998 SLC39A13Q96H72 371 aa6.66□□□□□ -1.34
NIPBL-205ENST00000505998 PRR25Q96S07 402 aa6.66□□□□□ -1.34
NIPBL-205ENST00000505998 PSMD1Q99460 953 aa6.66□□□□□ -1.34
NIPBL-205ENST00000505998 TIMP4Q99727 224 aa6.66□□□□□ -1.34
NIPBL-205ENST00000505998 SELENOOQ9BVL4 669 aa6.66□□□□□ -1.34
NIPBL-205ENST00000505998 FSD1LQ9BXM9 530 aa6.66□□□□□ -1.34
NIPBL-205ENST00000505998 PCDHAC1Q9H158 963 aa6.66□□□□□ -1.34
NIPBL-205ENST00000505998 TRIM36Q9NQ86 728 aa6.66□□□□□ -1.34
NIPBL-205ENST00000505998 NKX1-2Q9UD57 310 aaPredicted RBP6.66□□□□□ -1.34
NIPBL-205ENST00000505998 STEAP1Q9UHE8 339 aa6.66□□□□□ -1.34
NIPBL-205ENST00000505998 VPS51Q9UID3 782 aa6.66□□□□□ -1.34
NIPBL-205ENST00000505998 RIMKLBQ9ULI2 386 aa6.66□□□□□ -1.34
NIPBL-205ENST00000505998 ZFYVE9O95405 1425 aa6.66□□□□□ -1.34
NIPBL-205ENST00000505998 PRAG1Q86YV5 1406 aa6.66□□□□□ -1.34
NIPBL-205ENST00000505998 MYOM2P54296 1465 aa6.66□□□□□ -1.34
NIPBL-205ENST00000505998 STRCQ7RTU9 1775 aa6.65□□□□□ -1.34
NIPBL-205ENST00000505998 PODXLO00592 558 aa6.65□□□□□ -1.34
NIPBL-205ENST00000505998 CES2O00748 559 aa6.65□□□□□ -1.34
NIPBL-205ENST00000505998 HNRNPDLO14979 420 aaKnown RBP6.65□□□□□ -1.34
NIPBL-205ENST00000505998 GPD1P21695 349 aa6.65□□□□□ -1.34
NIPBL-205ENST00000505998 GABRB3P28472 473 aa6.65□□□□□ -1.34
NIPBL-205ENST00000505998 RBL1P28749 1068 aa6.65□□□□□ -1.34
NIPBL-205ENST00000505998 PPM1AP35813 382 aa6.65□□□□□ -1.34
NIPBL-205ENST00000505998 PTH2RP49190 550 aa6.65□□□□□ -1.34
NIPBL-205ENST00000505998 GPS1Q13098 491 aa6.65□□□□□ -1.34
NIPBL-205ENST00000505998 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.65□□□□□ -1.34
NIPBL-205ENST00000505998 ZNF362Q5T0B9 420 aaPredicted RBP6.65□□□□□ -1.34
NIPBL-205ENST00000505998 MRNIPQ6NTE8 343 aa6.65□□□□□ -1.34
NIPBL-205ENST00000505998 GGT6Q6P531 493 aa6.65□□□□□ -1.34
NIPBL-205ENST00000505998 KIAA0408Q6ZU52 694 aa6.65□□□□□ -1.34
NIPBL-205ENST00000505998 USP49Q70CQ1 688 aa6.65□□□□□ -1.34
NIPBL-205ENST00000505998 KRT73Q86Y46 540 aa6.65□□□□□ -1.34
NIPBL-205ENST00000505998 CCDC28AQ8IWP9 274 aa6.65□□□□□ -1.34
NIPBL-205ENST00000505998 SYTL1Q8IYJ3 562 aa6.65□□□□□ -1.34
NIPBL-205ENST00000505998 GLIS1Q8NBF1 620 aa6.65□□□□□ -1.34
NIPBL-205ENST00000505998 RPS6KC1Q96S38 1066 aa6.65□□□□□ -1.34
NIPBL-205ENST00000505998 GDF15Q99988 308 aa6.65□□□□□ -1.34
NIPBL-205ENST00000505998 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.65□□□□□ -1.343e-6■■■□□ 16
NIPBL-205ENST00000505998 SEMA4GQ9NTN9 838 aa6.65□□□□□ -1.34
NIPBL-205ENST00000505998 RGL1Q9NZL6 768 aa6.65□□□□□ -1.34
NIPBL-205ENST00000505998 ZMYND8Q9ULU4 1186 aaPredicted RBP6.65□□□□□ -1.34
NIPBL-205ENST00000505998 SLC27A6Q9Y2P4 619 aa6.65□□□□□ -1.34
NIPBL-205ENST00000505998 DAAM1Q9Y4D1 1078 aa6.65□□□□□ -1.34
NIPBL-205ENST00000505998 COMMD10Q9Y6G5 202 aa6.65□□□□□ -1.34
NIPBL-205ENST00000505998 TNRQ92752 1358 aa6.65□□□□□ -1.35
NIPBL-205ENST00000505998 ARHGEF17Q96PE2 2063 aaPredicted RBP6.65□□□□□ -1.35
NIPBL-205ENST00000505998 MED14O60244 1454 aa6.65□□□□□ -1.35
NIPBL-205ENST00000505998 SETBP1Q9Y6X0 1596 aa6.65□□□□□ -1.35
NIPBL-205ENST00000505998 M0R3H8 397 aa6.64□□□□□ -1.35
NIPBL-205ENST00000505998 PEX14O75381 377 aa6.64□□□□□ -1.35
NIPBL-205ENST00000505998 HNRNPCP07910 306 aaKnown RBP eCLIP6.64□□□□□ -1.35
NIPBL-205ENST00000505998 EGR1P18146 543 aa6.64□□□□□ -1.35
NIPBL-205ENST00000505998 WT1P19544 449 aaPredicted RBP6.64□□□□□ -1.35
NIPBL-205ENST00000505998 YY1P25490 414 aa6.64□□□□□ -1.35
NIPBL-205ENST00000505998 ITPKBP27987 946 aa6.64□□□□□ -1.35
NIPBL-205ENST00000505998 TECP42680 631 aa6.64□□□□□ -1.35
NIPBL-205ENST00000505998 L1TD1Q5T7N2 865 aaKnown RBP6.64□□□□□ -1.35
NIPBL-205ENST00000505998 RAP1GAP2Q684P5 730 aa6.64□□□□□ -1.35
NIPBL-205ENST00000505998 CEP85Q6P2H3 762 aa6.64□□□□□ -1.35
NIPBL-205ENST00000505998 AMIGO2Q86SJ2 522 aa6.64□□□□□ -1.35
NIPBL-205ENST00000505998 FSTL5Q8N475 847 aaPredicted RBP6.64□□□□□ -1.35
NIPBL-205ENST00000505998 MBD3L2Q8NHZ7 208 aaPredicted RBP6.64□□□□□ -1.35
NIPBL-205ENST00000505998 CYP2W1Q8TAV3 490 aa6.64□□□□□ -1.35
NIPBL-205ENST00000505998 ZNF384Q8TF68 577 aa6.64□□□□□ -1.35
NIPBL-205ENST00000505998 STK33Q9BYT3 514 aa6.64□□□□□ -1.35
NIPBL-205ENST00000505998 TM7SF3Q9NS93 570 aa6.64□□□□□ -1.35
NIPBL-205ENST00000505998 CDC23Q9UJX2 597 aa6.64□□□□□ -1.35
NIPBL-205ENST00000505998 AMFRQ9UKV5 643 aa6.64□□□□□ -1.35
NIPBL-205ENST00000505998 LRCH1Q9Y2L9 728 aa6.64□□□□□ -1.35
NIPBL-205ENST00000505998 ARID4BQ4LE39 1312 aaPredicted RBP6.64□□□□□ -1.35
NIPBL-205ENST00000505998 DIP2AQ14689 1571 aa6.64□□□□□ -1.35
NIPBL-205ENST00000505998 ABHD14A-ACY1A0A1B0GW23 586 aa6.63□□□□□ -1.35
NIPBL-205ENST00000505998 CCDC144AA2RUR9 1427 aa6.63□□□□□ -1.35
NIPBL-205ENST00000505998 PLA2G6O60733 806 aa6.63□□□□□ -1.35
NIPBL-205ENST00000505998 CREB1P16220 341 aa6.63□□□□□ -1.35
NIPBL-205ENST00000505998 MORC3Q14149 939 aa6.63□□□□□ -1.35
NIPBL-205ENST00000505998 STARD3Q14849 445 aa6.63□□□□□ -1.35
NIPBL-205ENST00000505998 CLCA4Q14CN2 919 aa6.63□□□□□ -1.35
NIPBL-205ENST00000505998 KRTAP15-1Q3LI76 137 aa6.63□□□□□ -1.35
NIPBL-205ENST00000505998 C1orf228Q6PIY5 440 aa6.63□□□□□ -1.35
NIPBL-205ENST00000505998 KNDC1Q76NI1 1749 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms