RNA–Protein interactions for RNA: ENST00000502781.5

LSM6-202, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-202ENST00000502781 DRC7Q8IY82 874 aa26.21■■□□□ 1.79
LSM6-202ENST00000502781 DEFB106AQ8N104 65 aa26.21■■□□□ 1.79
LSM6-202ENST00000502781 ATP2A3Q93084 1043 aa26.21■■□□□ 1.79
LSM6-202ENST00000502781 PLD4Q96BZ4 506 aa26.21■■□□□ 1.79
LSM6-202ENST00000502781 C11orf70Q9BRQ4 267 aa26.21■■□□□ 1.79
LSM6-202ENST00000502781 C1QTNF1Q9BXJ1 281 aa26.21■■□□□ 1.79
LSM6-202ENST00000502781 ECT2Q9H8V3 914 aa26.21■■□□□ 1.79
LSM6-202ENST00000502781 CAPN9O14815 690 aa26.2■■□□□ 1.79
LSM6-202ENST00000502781 SCAMP3O14828 347 aaKnown RBP26.2■■□□□ 1.79
LSM6-202ENST00000502781 GZMAP12544 262 aa26.2■■□□□ 1.79
LSM6-202ENST00000502781 KPNA1P52294 538 aaPredicted RBP26.2■■□□□ 1.79
LSM6-202ENST00000502781 C1QBPQ07021 282 aaKnown RBP26.2■■□□□ 1.79
LSM6-202ENST00000502781 EIF4EBP2Q13542 120 aaPredicted RBP26.2■■□□□ 1.79
LSM6-202ENST00000502781 ACAD10Q6JQN1 1059 aa26.2■■□□□ 1.79
LSM6-202ENST00000502781 WDR59Q6PJI9 974 aa26.2■■□□□ 1.79
LSM6-202ENST00000502781 ARCQ7LC44 396 aa26.2■■□□□ 1.79
LSM6-202ENST00000502781 OR8K1Q8NGG5 319 aa26.2■■□□□ 1.79
LSM6-202ENST00000502781 C8orf33Q9H7E9 229 aaPredicted RBP26.2■■□□□ 1.79
LSM6-202ENST00000502781 TAS2R14Q9NYV8 317 aa26.2■■□□□ 1.79
LSM6-202ENST00000502781 ADAM22Q9P0K1 906 aa26.2■■□□□ 1.79
LSM6-202ENST00000502781 WDR35Q9P2L0 1181 aa26.2■■□□□ 1.79
LSM6-202ENST00000502781 TMEM59LQ9UK28 342 aa26.2■■□□□ 1.79
LSM6-202ENST00000502781 LSM7Q9UK45 103 aaKnown RBP26.2■■□□□ 1.79
LSM6-202ENST00000502781 PIAS3Q9Y6X2 628 aa26.2■■□□□ 1.79
LSM6-202ENST00000502781 MSI1O43347 362 aaKnown RBP26.2■■□□□ 1.78
LSM6-202ENST00000502781 MFAP3LO75121 409 aa26.2■■□□□ 1.78
LSM6-202ENST00000502781 GRAP2O75791 330 aa26.2■■□□□ 1.78
LSM6-202ENST00000502781 PDGFBP01127 241 aaPredicted RBP26.2■■□□□ 1.78
LSM6-202ENST00000502781 RING1Q06587 406 aa26.2■■□□□ 1.78
LSM6-202ENST00000502781 TDRD12Q587J7 1177 aaKnown RBP26.2■■□□□ 1.78
LSM6-202ENST00000502781 DCAF6Q58WW2 860 aa26.2■■□□□ 1.78
LSM6-202ENST00000502781 FAM102AQ5T9C2 384 aaPredicted RBP26.2■■□□□ 1.78
LSM6-202ENST00000502781 PPP1R2P3Q6NXS1 205 aa26.2■■□□□ 1.78
LSM6-202ENST00000502781 TMC6Q7Z403 805 aa26.2■■□□□ 1.78
LSM6-202ENST00000502781 CHFRQ96EP1 664 aa26.2■■□□□ 1.78
LSM6-202ENST00000502781 MSANTD3Q96H12 275 aa26.2■■□□□ 1.78
LSM6-202ENST00000502781 SHDQ96IW2 340 aa26.2■■□□□ 1.78
LSM6-202ENST00000502781 SERPINB11Q96P15 392 aa26.2■■□□□ 1.78
LSM6-202ENST00000502781 DCLK3Q9C098 648 aa26.2■■□□□ 1.78
LSM6-202ENST00000502781 TICRRQ7Z2Z1 1910 aa26.19■■□□□ 1.78
LSM6-202ENST00000502781 NFATC1O95644 943 aa26.19■■□□□ 1.78
LSM6-202ENST00000502781 CALB1P05937 261 aa26.19■■□□□ 1.78
LSM6-202ENST00000502781 NOS2P35228 1153 aa26.19■■□□□ 1.78
LSM6-202ENST00000502781 MATKP42679 507 aa26.19■■□□□ 1.78
LSM6-202ENST00000502781 PITX1P78337 314 aaPredicted RBP26.19■■□□□ 1.78
LSM6-202ENST00000502781 TPRG1Q6ZUI0 275 aa26.19■■□□□ 1.78
LSM6-202ENST00000502781 TAC4Q86UU9 113 aa26.19■■□□□ 1.78
LSM6-202ENST00000502781 RALGPS2Q86X27 583 aaPredicted RBP26.19■■□□□ 1.78
LSM6-202ENST00000502781 CPA6Q8N4T0 437 aa26.19■■□□□ 1.78
LSM6-202ENST00000502781 NT5C3BQ969T7 300 aa26.19■■□□□ 1.78
LSM6-202ENST00000502781 SLC39A13Q96H72 371 aa26.19■■□□□ 1.78
LSM6-202ENST00000502781 ARHGAP20Q9P2F6 1191 aa26.19■■□□□ 1.78
LSM6-202ENST00000502781 ZNF510Q9Y2H8 683 aa26.19■■□□□ 1.78
LSM6-202ENST00000502781 ZDBF2Q9HCK1 2354 aa26.18■■□□□ 1.78
LSM6-202ENST00000502781 TCRBV5S1A1TA0A578 114 aa26.18■■□□□ 1.78
LSM6-202ENST00000502781 IRAK2O43187 625 aa26.18■■□□□ 1.78
LSM6-202ENST00000502781 TRUB2O95900 331 aaKnown RBP26.18■■□□□ 1.78
LSM6-202ENST00000502781 CYP17A1P05093 508 aa26.18■■□□□ 1.78
LSM6-202ENST00000502781 HMBSP08397 361 aa26.18■■□□□ 1.78
LSM6-202ENST00000502781 PLEKP08567 350 aaPredicted RBP26.18■■□□□ 1.78
LSM6-202ENST00000502781 TPM1P09493 284 aa26.18■■□□□ 1.78
LSM6-202ENST00000502781 CORO1AP31146 461 aaKnown RBP26.18■■□□□ 1.78
LSM6-202ENST00000502781 CTHP32929 405 aa26.18■■□□□ 1.78
LSM6-202ENST00000502781 SOX9P48436 509 aa26.18■■□□□ 1.78
LSM6-202ENST00000502781 DHCR24Q15392 516 aa26.18■■□□□ 1.78
LSM6-202ENST00000502781 RHBDF2Q6PJF5 856 aa26.18■■□□□ 1.78
LSM6-202ENST00000502781 MCOLN2Q8IZK6 566 aa26.18■■□□□ 1.78
LSM6-202ENST00000502781 VCPIP1Q96JH7 1222 aa26.18■■□□□ 1.78
LSM6-202ENST00000502781 ABHD10Q9NUJ1 306 aa26.18■■□□□ 1.78
LSM6-202ENST00000502781 STOML2Q9UJZ1 356 aa26.18■■□□□ 1.78
LSM6-202ENST00000502781 AGO1Q9UL18 857 aaKnown RBP26.18■■□□□ 1.78
LSM6-202ENST00000502781 TLR6Q9Y2C9 796 aa26.18■■□□□ 1.78
LSM6-202ENST00000502781 FAM86C2PA6NEL3 165 aa26.17■■□□□ 1.78
LSM6-202ENST00000502781 PRR33A8MZF0 331 aa26.17■■□□□ 1.78
LSM6-202ENST00000502781 SPECC1L-ADORA2AF8WAN1 911 aa26.17■■□□□ 1.78
LSM6-202ENST00000502781 GOLGA8SH3BPF8 625 aa26.17■■□□□ 1.78
LSM6-202ENST00000502781 TBX4P57082 545 aa26.17■■□□□ 1.78
LSM6-202ENST00000502781 CDK17Q00537 523 aa26.17■■□□□ 1.78
LSM6-202ENST00000502781 C1orf228Q6PIY5 440 aa26.17■■□□□ 1.78
LSM6-202ENST00000502781 FAM217AQ8IXS0 508 aa26.17■■□□□ 1.78
LSM6-202ENST00000502781 C3orf20Q8ND61 904 aa26.17■■□□□ 1.78
LSM6-202ENST00000502781 TTC8Q8TAM2 541 aa26.17■■□□□ 1.78
LSM6-202ENST00000502781 FCRL2Q96LA5 508 aaPredicted RBP26.17■■□□□ 1.78
LSM6-202ENST00000502781 NPY6RQ99463 290 aa26.17■■□□□ 1.78
LSM6-202ENST00000502781 TBC1D17Q9HA65 648 aa26.17■■□□□ 1.78
LSM6-202ENST00000502781 RRN3Q9NYV6 651 aa26.17■■□□□ 1.78
LSM6-202ENST00000502781 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP26.17■■□□□ 1.78
LSM6-202ENST00000502781 ADAMTS1Q9UHI8 967 aa26.17■■□□□ 1.78
LSM6-202ENST00000502781 KANSL1LA0AUZ9 987 aa26.16■■□□□ 1.78
LSM6-202ENST00000502781 MAN2B1O00754 1011 aa26.16■■□□□ 1.78
LSM6-202ENST00000502781 GJA4P35212 333 aa26.16■■□□□ 1.78
LSM6-202ENST00000502781 FLT3P36888 993 aa26.16■■□□□ 1.78
LSM6-202ENST00000502781 ADKP55263 362 aaKnown RBP26.16■■□□□ 1.78
LSM6-202ENST00000502781 NR1H3Q13133 447 aa26.16■■□□□ 1.78
LSM6-202ENST00000502781 GAB4Q2WGN9 574 aa26.16■■□□□ 1.78
LSM6-202ENST00000502781 TMEM31Q5JXX7 168 aa26.16■■□□□ 1.78
LSM6-202ENST00000502781 OTUD1Q5VV17 481 aaPredicted RBP26.16■■□□□ 1.78
LSM6-202ENST00000502781 CWF19L1Q69YN2 538 aaKnown RBP26.16■■□□□ 1.78
LSM6-202ENST00000502781 TRNP1Q6NT89 227 aa26.16■■□□□ 1.78
LSM6-202ENST00000502781 DENND1CQ8IV53 801 aa26.16■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms