RNA–Protein interactions for RNA: ENST00000498495.1

HSPG2-213, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-213ENST00000498495 RNF40O75150 1001 aa13.37□□□□□ -0.27
HSPG2-213ENST00000498495 GFPT2O94808 682 aa13.37□□□□□ -0.27
HSPG2-213ENST00000498495 APODP05090 189 aa13.37□□□□□ -0.27
HSPG2-213ENST00000498495 CORO1AP31146 461 aaKnown RBP13.37□□□□□ -0.27
HSPG2-213ENST00000498495 STAT1P42224 750 aa13.37□□□□□ -0.27
HSPG2-213ENST00000498495 YWHAZP63104 245 aaKnown RBP13.37□□□□□ -0.27
HSPG2-213ENST00000498495 TPM4P67936 248 aa13.37□□□□□ -0.27
HSPG2-213ENST00000498495 IQCB1Q15051 598 aa13.37□□□□□ -0.27
HSPG2-213ENST00000498495 TRIP4Q15650 581 aaPredicted RBP13.37□□□□□ -0.27
HSPG2-213ENST00000498495 ZNF528Q3MIS6 628 aa13.37□□□□□ -0.27
HSPG2-213ENST00000498495 TAF3Q5VWG9 929 aa13.37□□□□□ -0.27
HSPG2-213ENST00000498495 TSSK4Q6SA08 328 aa13.37□□□□□ -0.27
HSPG2-213ENST00000498495 NUDT18Q6ZVK8 323 aa13.37□□□□□ -0.27
HSPG2-213ENST00000498495 APTXQ7Z2E3 356 aaKnown RBP13.37□□□□□ -0.27
HSPG2-213ENST00000498495 TMEM35BQ8NCS4 154 aa13.37□□□□□ -0.27
HSPG2-213ENST00000498495 C1orf131Q8NDD1 294 aaKnown RBP13.37□□□□□ -0.27
HSPG2-213ENST00000498495 TRIM62Q9BVG3 475 aa13.37□□□□□ -0.27
HSPG2-213ENST00000498495 BBS2Q9BXC9 721 aa13.37□□□□□ -0.27
HSPG2-213ENST00000498495 SYNCQ9H7C4 482 aa13.37□□□□□ -0.27
HSPG2-213ENST00000498495 ARHGEF4Q9NR80 690 aa13.37□□□□□ -0.27
HSPG2-213ENST00000498495 DEC1Q9P2X7 70 aa13.37□□□□□ -0.27
HSPG2-213ENST00000498495 AGO1Q9UL18 857 aaKnown RBP13.37□□□□□ -0.27
HSPG2-213ENST00000498495 NAALADL1Q9UQQ1 740 aa13.37□□□□□ -0.27
HSPG2-213ENST00000498495 F5P12259 2224 aa13.37□□□□□ -0.27
HSPG2-213ENST00000498495 A0A0A0MRY4 1105 aa13.36□□□□□ -0.27
HSPG2-213ENST00000498495 NEDD8-MDP1E9PL57 170 aa13.36□□□□□ -0.27
HSPG2-213ENST00000498495 HOXC11O43248 304 aaPredicted RBP13.36□□□□□ -0.27
HSPG2-213ENST00000498495 KAT7O95251 611 aa13.36□□□□□ -0.27
HSPG2-213ENST00000498495 CAVIN2O95810 425 aa13.36□□□□□ -0.27
HSPG2-213ENST00000498495 TYRP14679 529 aa13.36□□□□□ -0.27
HSPG2-213ENST00000498495 SOX5P35711 763 aa13.36□□□□□ -0.27
HSPG2-213ENST00000498495 NBL1P41271 181 aa13.36□□□□□ -0.27
HSPG2-213ENST00000498495 GRIA2P42262 883 aa13.36□□□□□ -0.27
HSPG2-213ENST00000498495 NRLP54845 237 aa13.36□□□□□ -0.27
HSPG2-213ENST00000498495 SATB1Q01826 763 aa13.36□□□□□ -0.27
HSPG2-213ENST00000498495 ZSCAN23Q3MJ62 389 aa13.36□□□□□ -0.27
HSPG2-213ENST00000498495 EFHC1Q5JVL4 640 aa13.36□□□□□ -0.27
HSPG2-213ENST00000498495 OR6B2Q6IFH4 312 aa13.36□□□□□ -0.27
HSPG2-213ENST00000498495 MSANTD2Q6P1R3 559 aa13.36□□□□□ -0.27
HSPG2-213ENST00000498495 ZC3H14Q6PJT7 736 aaKnown RBP13.36□□□□□ -0.27
HSPG2-213ENST00000498495 BEND5Q7L4P6 421 aa13.36□□□□□ -0.27
HSPG2-213ENST00000498495 CACNA2D4Q7Z3S7 1137 aa13.36□□□□□ -0.27
HSPG2-213ENST00000498495 C12orf40Q86WS4 652 aa13.36□□□□□ -0.27
HSPG2-213ENST00000498495 UNC45BQ8IWX7 931 aa13.36□□□□□ -0.27
HSPG2-213ENST00000498495 IPO4Q8TEX9 1081 aaKnown RBP13.36□□□□□ -0.27
HSPG2-213ENST00000498495 ATRIPQ8WXE1 791 aa13.36□□□□□ -0.27
HSPG2-213ENST00000498495 CPXM1Q96SM3 734 aa13.36□□□□□ -0.27
HSPG2-213ENST00000498495 PHOX2BQ99453 314 aa13.36□□□□□ -0.27
HSPG2-213ENST00000498495 POPDC2Q9HBU9 364 aa13.36□□□□□ -0.27
HSPG2-213ENST00000498495 RTN4Q9NQC3 1192 aaKnown RBP13.36□□□□□ -0.27
HSPG2-213ENST00000498495 PRMT8Q9NR22 394 aaPredicted RBP13.36□□□□□ -0.27
HSPG2-213ENST00000498495 MARK1Q9P0L2 795 aa13.36□□□□□ -0.27
HSPG2-213ENST00000498495 TBC1D3BA6NDS4 549 aa13.35□□□□□ -0.27
HSPG2-213ENST00000498495 CHURC1-FNTBB4DL54 471 aa13.35□□□□□ -0.27
HSPG2-213ENST00000498495 K7EQS6 105 aa13.35□□□□□ -0.27
HSPG2-213ENST00000498495 EPHB6O15197 1021 aa13.35□□□□□ -0.27
HSPG2-213ENST00000498495 TEX33O43247 280 aa13.35□□□□□ -0.27
HSPG2-213ENST00000498495 MSI1O43347 362 aaKnown RBP13.35□□□□□ -0.27
HSPG2-213ENST00000498495 TULP3O75386 442 aa13.35□□□□□ -0.27
HSPG2-213ENST00000498495 SERPINC1P01008 464 aa13.35□□□□□ -0.27
HSPG2-213ENST00000498495 CYBBP04839 570 aa13.35□□□□□ -0.27
HSPG2-213ENST00000498495 FYNP06241 537 aa13.35□□□□□ -0.27
HSPG2-213ENST00000498495 GLI1P08151 1106 aa13.35□□□□□ -0.27
HSPG2-213ENST00000498495 SEC13P55735 322 aa13.35□□□□□ -0.27
HSPG2-213ENST00000498495 TBX4P57082 545 aa13.35□□□□□ -0.27
HSPG2-213ENST00000498495 JAM2P57087 298 aa13.35□□□□□ -0.27
HSPG2-213ENST00000498495 C2orf27AQ580R0 203 aa13.35□□□□□ -0.27
HSPG2-213ENST00000498495 SYPL2Q5VXT5 272 aa13.35□□□□□ -0.27
HSPG2-213ENST00000498495 NOP9Q86U38 636 aaKnown RBP13.35□□□□□ -0.27
HSPG2-213ENST00000498495 ERICH1Q86X53 443 aa13.35□□□□□ -0.27
HSPG2-213ENST00000498495 ZNF677Q86XU0 584 aa13.35□□□□□ -0.27
HSPG2-213ENST00000498495 RPLP0P6Q8NHW5 317 aa13.35□□□□□ -0.27
HSPG2-213ENST00000498495 DDX1Q92499 740 aaKnown RBP13.35□□□□□ -0.27
HSPG2-213ENST00000498495 EZH1Q92800 747 aaPredicted RBP13.35□□□□□ -0.27
HSPG2-213ENST00000498495 SERPINB11Q96P15 392 aa13.35□□□□□ -0.27
HSPG2-213ENST00000498495 FAM126AQ9BYI3 521 aaPredicted RBP13.35□□□□□ -0.27
HSPG2-213ENST00000498495 CBX8Q9HC52 389 aa13.35□□□□□ -0.27
HSPG2-213ENST00000498495 ZSCAN32Q9NX65 697 aa13.35□□□□□ -0.27
HSPG2-213ENST00000498495 PLK2Q9NYY3 685 aa13.35□□□□□ -0.27
HSPG2-213ENST00000498495 TJP2Q9UDY2 1190 aa13.35□□□□□ -0.27
HSPG2-213ENST00000498495 SLC8A2Q9UPR5 921 aa13.35□□□□□ -0.27
HSPG2-213ENST00000498495 R4GN57 208 aa13.35□□□□□ -0.27
HSPG2-213ENST00000498495 GOLGA6L19H0YKK7 550 aa13.34□□□□□ -0.27
HSPG2-213ENST00000498495 ERBB2P04626 1255 aa13.34□□□□□ -0.27
HSPG2-213ENST00000498495 MMEP08473 750 aa13.34□□□□□ -0.27
HSPG2-213ENST00000498495 CDH5P33151 784 aaPredicted RBP13.34□□□□□ -0.27
HSPG2-213ENST00000498495 TNFRSF4P43489 277 aa13.34□□□□□ -0.27
HSPG2-213ENST00000498495 MRPS21P82921 87 aaKnown RBP13.34□□□□□ -0.27
HSPG2-213ENST00000498495 SLC6A3Q01959 620 aa13.34□□□□□ -0.27
HSPG2-213ENST00000498495 KDSRQ06136 332 aa13.34□□□□□ -0.27
HSPG2-213ENST00000498495 TAF5Q15542 800 aa13.34□□□□□ -0.27
HSPG2-213ENST00000498495 DCAF6Q58WW2 860 aa13.34□□□□□ -0.27
HSPG2-213ENST00000498495 NUGGCQ68CJ6 796 aa13.34□□□□□ -0.27
HSPG2-213ENST00000498495 GRAMD4Q6IC98 578 aa13.34□□□□□ -0.27
HSPG2-213ENST00000498495 PKN3Q6P5Z2 889 aa13.34□□□□□ -0.27
HSPG2-213ENST00000498495 TOGARAM2Q6ZUX3 1019 aa13.34□□□□□ -0.27
HSPG2-213ENST00000498495 LUZP1Q86V48 1076 aa13.34□□□□□ -0.27
HSPG2-213ENST00000498495 ALYREFQ86V81 257 aaKnown RBP13.34□□□□□ -0.27
HSPG2-213ENST00000498495 ZDHHC17Q8IUH5 632 aa13.34□□□□□ -0.27
HSPG2-213ENST00000498495 ETFBKMTQ8IXQ9 262 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms