RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 CELF2O95319 508 aaKnown RBP11.47□□□□□ -0.57
CMSS1-208ENST00000496116 FAM163BP0C2L3 166 aa11.47□□□□□ -0.57
CMSS1-208ENST00000496116 NQO1P15559 274 aaKnown RBP11.47□□□□□ -0.57
CMSS1-208ENST00000496116 SULT1E1P49888 294 aa11.47□□□□□ -0.57
CMSS1-208ENST00000496116 ATXN1P54253 815 aaKnown RBP11.47□□□□□ -0.57
CMSS1-208ENST00000496116 LILRA4P59901 499 aa11.47□□□□□ -0.57
CMSS1-208ENST00000496116 GBE1Q04446 702 aa11.47□□□□□ -0.57
CMSS1-208ENST00000496116 HIC1Q14526 733 aa11.47□□□□□ -0.57
CMSS1-208ENST00000496116 ZNF618Q5T7W0 954 aa11.47□□□□□ -0.57
CMSS1-208ENST00000496116 FAXCQ5TGI0 409 aa11.47□□□□□ -0.57
CMSS1-208ENST00000496116 TWF2Q6IBS0 349 aaKnown RBP11.47□□□□□ -0.57
CMSS1-208ENST00000496116 KCNT2Q6UVM3 1135 aa11.47□□□□□ -0.57
CMSS1-208ENST00000496116 CAND1Q86VP6 1230 aaKnown RBP11.47□□□□□ -0.57
CMSS1-208ENST00000496116 CTAGE3PQ8IX95 158 aa11.47□□□□□ -0.57
CMSS1-208ENST00000496116 HACE1Q8IYU2 909 aa11.47□□□□□ -0.57
CMSS1-208ENST00000496116 QKIQ96PU8 341 aaKnown RBP eCLIP11.47□□□□□ -0.571e-6■■■■□ 21.9
CMSS1-208ENST00000496116 HNRNPABQ99729 332 aaKnown RBP11.47□□□□□ -0.57
CMSS1-208ENST00000496116 DUSP16Q9BY84 665 aa11.47□□□□□ -0.57
CMSS1-208ENST00000496116 IQCGQ9H095 443 aaKnown RBP11.47□□□□□ -0.57
CMSS1-208ENST00000496116 RNF39Q9H2S5 420 aa11.47□□□□□ -0.57
CMSS1-208ENST00000496116 GOLGA2P5Q9HBQ8 144 aa11.47□□□□□ -0.57
CMSS1-208ENST00000496116 POPDC2Q9HBU9 364 aa11.47□□□□□ -0.57
CMSS1-208ENST00000496116 TXLNGQ9NUQ3 528 aa11.47□□□□□ -0.57
CMSS1-208ENST00000496116 MTMR10Q9NXD2 777 aa11.47□□□□□ -0.57
CMSS1-208ENST00000496116 STAP1Q9ULZ2 295 aa11.47□□□□□ -0.57
CMSS1-208ENST00000496116 Q9Y3F1 56 aa11.47□□□□□ -0.57
CMSS1-208ENST00000496116 DAB1O75553 588 aa11.47□□□□□ -0.57
CMSS1-208ENST00000496116 TROVE2P10155 538 aaKnown RBP eCLIP11.47□□□□□ -0.57
CMSS1-208ENST00000496116 NPR3P17342 541 aa11.47□□□□□ -0.57
CMSS1-208ENST00000496116 LRPAP1P30533 357 aa11.47□□□□□ -0.57
CMSS1-208ENST00000496116 SLC18A2Q05940 514 aa11.47□□□□□ -0.57
CMSS1-208ENST00000496116 SOX4Q06945 474 aaPredicted RBP11.47□□□□□ -0.57
CMSS1-208ENST00000496116 ADIGQ0VDE8 80 aa11.47□□□□□ -0.57
CMSS1-208ENST00000496116 FAAP100Q0VG06 881 aa11.47□□□□□ -0.57
CMSS1-208ENST00000496116 NCBP2-AS2Q69YL0 99 aa11.47□□□□□ -0.57
CMSS1-208ENST00000496116 PAXIP1Q6ZW49 1069 aaPredicted RBP11.47□□□□□ -0.57
CMSS1-208ENST00000496116 PIGZQ86VD9 579 aa11.47□□□□□ -0.57
CMSS1-208ENST00000496116 DEFB106AQ8N104 65 aa11.47□□□□□ -0.57
CMSS1-208ENST00000496116 CCDC185Q8N715 623 aa11.47□□□□□ -0.57
CMSS1-208ENST00000496116 ZNF398Q8TD17 642 aa11.47□□□□□ -0.57
CMSS1-208ENST00000496116 MAGEC3Q8TD91 643 aa11.47□□□□□ -0.57
CMSS1-208ENST00000496116 TFB1MQ8WVM0 346 aaKnown RBP11.47□□□□□ -0.57
CMSS1-208ENST00000496116 LENG1Q96BZ8 264 aaPredicted RBP11.47□□□□□ -0.57
CMSS1-208ENST00000496116 KLF6Q99612 283 aaPredicted RBP11.47□□□□□ -0.57
CMSS1-208ENST00000496116 MANSC1Q9H8J5 431 aa11.47□□□□□ -0.57
CMSS1-208ENST00000496116 LRRC4Q9HBW1 653 aa11.47□□□□□ -0.57
CMSS1-208ENST00000496116 XAB2Q9HCS7 855 aaKnown RBP11.47□□□□□ -0.57
CMSS1-208ENST00000496116 FZD10Q9ULW2 581 aa11.47□□□□□ -0.57
CMSS1-208ENST00000496116 TTLL3Q9Y4R7 772 aa11.47□□□□□ -0.57
CMSS1-208ENST00000496116 TRIP12Q14669 1992 aaPredicted RBP11.47□□□□□ -0.57
CMSS1-208ENST00000496116 STK10O94804 968 aaKnown RBP11.46□□□□□ -0.57
CMSS1-208ENST00000496116 UNC5CO95185 931 aa11.46□□□□□ -0.57
CMSS1-208ENST00000496116 APOEP02649 317 aa11.46□□□□□ -0.57
CMSS1-208ENST00000496116 SNRPAP09012 282 aaKnown RBP11.46□□□□□ -0.57
CMSS1-208ENST00000496116 CCNB1P14635 433 aa11.46□□□□□ -0.57
CMSS1-208ENST00000496116 GOT1P17174 413 aa11.46□□□□□ -0.57
CMSS1-208ENST00000496116 PRKCHP24723 683 aa11.46□□□□□ -0.57
CMSS1-208ENST00000496116 SLC8A1P32418 973 aa11.46□□□□□ -0.57
CMSS1-208ENST00000496116 NOS2P35228 1153 aa11.46□□□□□ -0.57
CMSS1-208ENST00000496116 MRPS5P82675 430 aaKnown RBP11.46□□□□□ -0.57
CMSS1-208ENST00000496116 SLC10A2Q12908 348 aaPredicted RBP11.46□□□□□ -0.57
CMSS1-208ENST00000496116 GPR162Q16538 588 aa11.46□□□□□ -0.57
CMSS1-208ENST00000496116 DCAF6Q58WW2 860 aa11.46□□□□□ -0.57
CMSS1-208ENST00000496116 TAF2Q6P1X5 1199 aa11.46□□□□□ -0.57
CMSS1-208ENST00000496116 OTOAQ7RTW8 1153 aa11.46□□□□□ -0.57
CMSS1-208ENST00000496116 FAM131BQ86XD5 332 aa11.46□□□□□ -0.57
CMSS1-208ENST00000496116 PPM1NQ8N819 430 aa11.46□□□□□ -0.57
CMSS1-208ENST00000496116 SMG8Q8ND04 991 aaKnown RBP11.46□□□□□ -0.57
CMSS1-208ENST00000496116 HTR3CQ8WXA8 447 aa11.46□□□□□ -0.57
CMSS1-208ENST00000496116 DTLQ9NZJ0 730 aa11.46□□□□□ -0.57
CMSS1-208ENST00000496116 FLRT1Q9NZU1 646 aa11.46□□□□□ -0.57
CMSS1-208ENST00000496116 SLC17A7Q9P2U7 560 aa11.46□□□□□ -0.57
CMSS1-208ENST00000496116 DOCK3Q8IZD9 2030 aa11.45□□□□□ -0.58
CMSS1-208ENST00000496116 WDR91A4D1P6 747 aa11.45□□□□□ -0.58
CMSS1-208ENST00000496116 M0QZ92 97 aa11.45□□□□□ -0.58
CMSS1-208ENST00000496116 IGF2BP3O00425 579 aaKnown RBP eCLIP11.45□□□□□ -0.58
CMSS1-208ENST00000496116 CYB561D2O14569 222 aa11.45□□□□□ -0.58
CMSS1-208ENST00000496116 COPEO14579 308 aa11.45□□□□□ -0.58
CMSS1-208ENST00000496116 HGSO14964 777 aaPredicted RBP11.45□□□□□ -0.58
CMSS1-208ENST00000496116 KRT38O76015 456 aa11.45□□□□□ -0.58
CMSS1-208ENST00000496116 METTL18O95568 372 aa11.45□□□□□ -0.58
CMSS1-208ENST00000496116 PYGBP11216 843 aa11.45□□□□□ -0.58
CMSS1-208ENST00000496116 NEFHP12036 1026 aa11.45□□□□□ -0.58
CMSS1-208ENST00000496116 AMPD1P23109 780 aa11.45□□□□□ -0.58
CMSS1-208ENST00000496116 TKTP29401 623 aaKnown RBP11.45□□□□□ -0.58
CMSS1-208ENST00000496116 FDFT1P37268 417 aa11.45□□□□□ -0.58
CMSS1-208ENST00000496116 MAGEA3P43357 314 aa11.45□□□□□ -0.58
CMSS1-208ENST00000496116 RIPK1Q13546 671 aa11.45□□□□□ -0.58
CMSS1-208ENST00000496116 SEMA5AQ13591 1074 aa11.45□□□□□ -0.58
CMSS1-208ENST00000496116 SWT1Q5T5J6 900 aaKnown RBP11.45□□□□□ -0.58
CMSS1-208ENST00000496116 CHSY1Q86X52 802 aa11.45□□□□□ -0.58
CMSS1-208ENST00000496116 SIX6OS1Q8N1H7 587 aa11.45□□□□□ -0.58
CMSS1-208ENST00000496116 AGGF1Q8N302 714 aaeCLIP11.45□□□□□ -0.586e-8■■■■■ 35.7
CMSS1-208ENST00000496116 GSDMBQ8TAX9 411 aa11.45□□□□□ -0.58
CMSS1-208ENST00000496116 C10orf82Q8WW14 230 aa11.45□□□□□ -0.58
CMSS1-208ENST00000496116 KCTD13Q8WZ19 329 aa11.45□□□□□ -0.58
CMSS1-208ENST00000496116 ERP27Q96DN0 273 aa11.45□□□□□ -0.58
CMSS1-208ENST00000496116 MTBPQ96DY7 904 aa11.45□□□□□ -0.58
CMSS1-208ENST00000496116 THOC1Q96FV9 657 aaKnown RBP11.45□□□□□ -0.58
CMSS1-208ENST00000496116 SERAC1Q96JX3 654 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms