RNA–Protein interactions for RNA: ENST00000494503.1

UBR4-216, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-216ENST00000494503 UNC93AQ86WB7 457 aa10.13□□□□□ -0.79
UBR4-216ENST00000494503 PNPLA1Q8N8W4 532 aa10.13□□□□□ -0.79
UBR4-216ENST00000494503 TAF4BQ92750 862 aa10.13□□□□□ -0.79
UBR4-216ENST00000494503 TOE1Q96GM8 510 aaKnown RBP10.13□□□□□ -0.79
UBR4-216ENST00000494503 TWNKQ96RR1 684 aa10.13□□□□□ -0.79
UBR4-216ENST00000494503 GPR174Q9BXC1 333 aa10.13□□□□□ -0.79
UBR4-216ENST00000494503 FAM124BQ9H5Z6 455 aaPredicted RBP10.13□□□□□ -0.79
UBR4-216ENST00000494503 PRDM16Q9HAZ2 1276 aa10.13□□□□□ -0.79
UBR4-216ENST00000494503 NMUR1Q9HB89 426 aa10.13□□□□□ -0.79
UBR4-216ENST00000494503 CAPN10Q9HC96 672 aa10.13□□□□□ -0.79
UBR4-216ENST00000494503 CYLDQ9NQC7 956 aa10.13□□□□□ -0.79
UBR4-216ENST00000494503 IL37Q9NZH6 218 aa10.13□□□□□ -0.79
UBR4-216ENST00000494503 CFAP45Q9UL16 551 aa10.13□□□□□ -0.79
UBR4-216ENST00000494503 HCN2Q9UL51 889 aa10.13□□□□□ -0.79
UBR4-216ENST00000494503 LHX6Q9UPM6 363 aa10.13□□□□□ -0.79
UBR4-216ENST00000494503 MAPK8IP1Q9UQF2 711 aa10.13□□□□□ -0.79
UBR4-216ENST00000494503 MSRB2Q9Y3D2 182 aa10.13□□□□□ -0.79
UBR4-216ENST00000494503 STARD13Q9Y3M8 1113 aa10.13□□□□□ -0.79
UBR4-216ENST00000494503 STON1Q9Y6Q2 735 aa10.13□□□□□ -0.79
UBR4-216ENST00000494503 KNL1Q8NG31 2342 aa10.13□□□□□ -0.79
UBR4-216ENST00000494503 ANKRD11Q6UB99 2663 aaPredicted RBP10.13□□□□□ -0.79
UBR4-216ENST00000494503 GOLGA4Q13439 2230 aaKnown RBP10.13□□□□□ -0.79
UBR4-216ENST00000494503 FAM92AA1XBS5 289 aa10.12□□□□□ -0.79
UBR4-216ENST00000494503 GOLGA8CPA6NN73 597 aa10.12□□□□□ -0.79
UBR4-216ENST00000494503 ASS1P00966 412 aaKnown RBP10.12□□□□□ -0.79
UBR4-216ENST00000494503 ZSCAN22P10073 491 aaPredicted RBP10.12□□□□□ -0.79
UBR4-216ENST00000494503 NCAM1P13591 858 aa10.12□□□□□ -0.79
UBR4-216ENST00000494503 NR2F2P24468 414 aa10.12□□□□□ -0.79
UBR4-216ENST00000494503 SLC8A3P57103 927 aa10.12□□□□□ -0.79
UBR4-216ENST00000494503 DNM1Q05193 864 aaKnown RBP10.12□□□□□ -0.79
UBR4-216ENST00000494503 GRIK2Q13002 908 aa10.12□□□□□ -0.79
UBR4-216ENST00000494503 TRIP6Q15654 476 aaKnown RBP10.12□□□□□ -0.79
UBR4-216ENST00000494503 ZNF423Q2M1K9 1284 aa10.12□□□□□ -0.79
UBR4-216ENST00000494503 FUT11Q495W5 492 aa10.12□□□□□ -0.79
UBR4-216ENST00000494503 CCDC157Q569K6 752 aa10.12□□□□□ -0.79
UBR4-216ENST00000494503 PEAR1Q5VY43 1037 aaPredicted RBP10.12□□□□□ -0.79
UBR4-216ENST00000494503 PIP4P1Q86T03 277 aa10.12□□□□□ -0.79
UBR4-216ENST00000494503 DENND1CQ8IV53 801 aa10.12□□□□□ -0.79
UBR4-216ENST00000494503 NAXDQ8IW45 347 aa10.12□□□□□ -0.79
UBR4-216ENST00000494503 CRYBG2Q8N1P7 616 aa10.12□□□□□ -0.79
UBR4-216ENST00000494503 DDI1Q8WTU0 396 aa10.12□□□□□ -0.79
UBR4-216ENST00000494503 PRCCQ92733 491 aaPredicted RBP10.12□□□□□ -0.79
UBR4-216ENST00000494503 PAGE5Q96GU1 130 aa10.12□□□□□ -0.79
UBR4-216ENST00000494503 HEXIM2Q96MH2 286 aaKnown RBP10.12□□□□□ -0.79
UBR4-216ENST00000494503 CDK5RAP1Q96SZ6 601 aaKnown RBP10.12□□□□□ -0.79
UBR4-216ENST00000494503 HNRNPABQ99729 332 aaKnown RBP10.12□□□□□ -0.79
UBR4-216ENST00000494503 GABRG3Q99928 467 aa10.12□□□□□ -0.79
UBR4-216ENST00000494503 NIF3L1Q9GZT8 377 aa10.12□□□□□ -0.79
UBR4-216ENST00000494503 CSNK1G1Q9HCP0 422 aa10.12□□□□□ -0.79
UBR4-216ENST00000494503 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.12□□□□□ -0.791e-7■■□□□ 11.9
UBR4-216ENST00000494503 MARK1Q9P0L2 795 aa10.12□□□□□ -0.79
UBR4-216ENST00000494503 STRIP2Q9ULQ0 834 aa10.12□□□□□ -0.79
UBR4-216ENST00000494503 WASF3Q9UPY6 502 aa10.12□□□□□ -0.79
UBR4-216ENST00000494503 WDFY3Q8IZQ1 3526 aa10.12□□□□□ -0.79
UBR4-216ENST00000494503 ZZEF1O43149 2961 aa10.11□□□□□ -0.79
UBR4-216ENST00000494503 ACACAQ13085 2346 aa10.11□□□□□ -0.79
UBR4-216ENST00000494503 A0A1B0GVL5 298 aa10.11□□□□□ -0.79
UBR4-216ENST00000494503 SLC12A8A0AV02 714 aa10.11□□□□□ -0.79
UBR4-216ENST00000494503 PDXKO00764 312 aa10.11□□□□□ -0.79
UBR4-216ENST00000494503 STC2O76061 302 aa10.11□□□□□ -0.79
UBR4-216ENST00000494503 EPHX1P07099 455 aa10.11□□□□□ -0.79
UBR4-216ENST00000494503 SLFN14P0C7P3 912 aa10.11□□□□□ -0.79
UBR4-216ENST00000494503 FTH1P19P0C7X4 201 aa10.11□□□□□ -0.79
UBR4-216ENST00000494503 CD59P13987 128 aa10.11□□□□□ -0.79
UBR4-216ENST00000494503 PFKFB1P16118 471 aa10.11□□□□□ -0.79
UBR4-216ENST00000494503 CHKAP35790 457 aa10.11□□□□□ -0.79
UBR4-216ENST00000494503 IL12RB1P42701 662 aa10.11□□□□□ -0.79
UBR4-216ENST00000494503 PSEN1P49768 467 aa10.11□□□□□ -0.79
UBR4-216ENST00000494503 CLDN10P78369 228 aa10.11□□□□□ -0.79
UBR4-216ENST00000494503 COG7P83436 770 aa10.11□□□□□ -0.79
UBR4-216ENST00000494503 RING1Q06587 406 aa10.11□□□□□ -0.79
UBR4-216ENST00000494503 HNRNPDQ14103 355 aaKnown RBP10.11□□□□□ -0.79
UBR4-216ENST00000494503 NUMA1Q14980 2115 aa10.11□□□□□ -0.79
UBR4-216ENST00000494503 GEN1Q17RS7 908 aa10.11□□□□□ -0.79
UBR4-216ENST00000494503 PPP1R26Q5T8A7 1209 aaPredicted RBP10.11□□□□□ -0.79
UBR4-216ENST00000494503 DCAF12L1Q5VU92 463 aa10.11□□□□□ -0.79
UBR4-216ENST00000494503 SERPINA13PQ6UXR4 307 aa10.11□□□□□ -0.79
UBR4-216ENST00000494503 ANKS1BQ7Z6G8 1248 aa10.11□□□□□ -0.79
UBR4-216ENST00000494503 TMPRSS6Q8IU80 811 aa10.11□□□□□ -0.79
UBR4-216ENST00000494503 SLC9A9Q8IVB4 645 aa10.11□□□□□ -0.79
UBR4-216ENST00000494503 FAM186BQ8IYM0 893 aa10.11□□□□□ -0.79
UBR4-216ENST00000494503 TMC2Q8TDI7 906 aa10.11□□□□□ -0.79
UBR4-216ENST00000494503 TAS1R2Q8TE23 839 aa10.11□□□□□ -0.79
UBR4-216ENST00000494503 SORCS1Q8WY21 1168 aa10.11□□□□□ -0.79
UBR4-216ENST00000494503 SIPA1Q96FS4 1042 aa10.11□□□□□ -0.79
UBR4-216ENST00000494503 TMEM121BQ9BXQ6 578 aaPredicted RBP10.11□□□□□ -0.79
UBR4-216ENST00000494503 MARCH2Q9P0N8 246 aa10.11□□□□□ -0.79
UBR4-216ENST00000494503 ZNF510Q9Y2H8 683 aa10.11□□□□□ -0.79
UBR4-216ENST00000494503 A0A1B0GTW7 788 aa10.1□□□□□ -0.79
UBR4-216ENST00000494503 UPK3BL1B0FP48 263 aa10.1□□□□□ -0.79
UBR4-216ENST00000494503 HHLA1C9JL84 531 aa10.1□□□□□ -0.79
UBR4-216ENST00000494503 UPK3BL2E5RIL1 263 aa10.1□□□□□ -0.79
UBR4-216ENST00000494503 GFRA2O00451 464 aa10.1□□□□□ -0.79
UBR4-216ENST00000494503 IKBKBO14920 756 aa10.1□□□□□ -0.79
UBR4-216ENST00000494503 ACTN4O43707 911 aaKnown RBP10.1□□□□□ -0.79
UBR4-216ENST00000494503 KLRC4O43908 158 aa10.1□□□□□ -0.79
UBR4-216ENST00000494503 GREM1O60565 184 aa10.1□□□□□ -0.79
UBR4-216ENST00000494503 TSPAN3O60637 253 aa10.1□□□□□ -0.79
UBR4-216ENST00000494503 CER1O95813 267 aa10.1□□□□□ -0.79
UBR4-216ENST00000494503 CISD3P0C7P0 127 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms