RNA–Protein interactions for RNA: ENST00000488186.5

C9orf3-219, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-219ENST00000488186 PLD4Q96BZ4 506 aa16.42■□□□□ 0.22
C9orf3-219ENST00000488186 PIWIL1Q96J94 861 aaKnown RBP16.42■□□□□ 0.22
C9orf3-219ENST00000488186 ZFYVE19Q96K21 471 aa16.42■□□□□ 0.22
C9orf3-219ENST00000488186 SERPINB11Q96P15 392 aa16.42■□□□□ 0.22
C9orf3-219ENST00000488186 EPHX3Q9H6B9 360 aa16.42■□□□□ 0.22
C9orf3-219ENST00000488186 FAM204AQ9H8W3 233 aa16.42■□□□□ 0.22
C9orf3-219ENST00000488186 METTL5Q9NRN9 209 aaKnown RBP16.42■□□□□ 0.22
C9orf3-219ENST00000488186 RRN3Q9NYV6 651 aa16.42■□□□□ 0.22
C9orf3-219ENST00000488186 TAS2R14Q9NYV8 317 aa16.42■□□□□ 0.22
C9orf3-219ENST00000488186 STAP1Q9ULZ2 295 aa16.42■□□□□ 0.22
C9orf3-219ENST00000488186 ZNF510Q9Y2H8 683 aa16.42■□□□□ 0.22
C9orf3-219ENST00000488186 HBS1LQ9Y450 684 aaKnown RBP16.42■□□□□ 0.22
C9orf3-219ENST00000488186 SYNJ2BP-COX16A0A087WUM0 186 aa16.41■□□□□ 0.22
C9orf3-219ENST00000488186 SSU72P8A0A1W2PR75 194 aa16.41■□□□□ 0.22
C9orf3-219ENST00000488186 FYNP06241 537 aa16.41■□□□□ 0.22
C9orf3-219ENST00000488186 DESP17661 470 aa16.41■□□□□ 0.22
C9orf3-219ENST00000488186 MATKP42679 507 aa16.41■□□□□ 0.22
C9orf3-219ENST00000488186 TBX4P57082 545 aa16.41■□□□□ 0.22
C9orf3-219ENST00000488186 ZXDBP98169 803 aa16.41■□□□□ 0.22
C9orf3-219ENST00000488186 NR1H3Q13133 447 aa16.41■□□□□ 0.22
C9orf3-219ENST00000488186 MSANTD2Q6P1R3 559 aa16.41■□□□□ 0.22
C9orf3-219ENST00000488186 ALKBH5Q6P6C2 394 aaKnown RBP16.41■□□□□ 0.22
C9orf3-219ENST00000488186 DCUN1D2Q6PH85 259 aa16.41■□□□□ 0.22
C9orf3-219ENST00000488186 SND1Q7KZF4 910 aaKnown RBP eCLIP16.41■□□□□ 0.22
C9orf3-219ENST00000488186 MON1BQ7L1V2 547 aa16.41■□□□□ 0.22
C9orf3-219ENST00000488186 UNC45BQ8IWX7 931 aa16.41■□□□□ 0.22
C9orf3-219ENST00000488186 KIAA1958Q8N8K9 716 aa16.41■□□□□ 0.22
C9orf3-219ENST00000488186 TC2NQ8N9U0 490 aa16.41■□□□□ 0.22
C9orf3-219ENST00000488186 ADAM32Q8TC27 787 aa16.41■□□□□ 0.22
C9orf3-219ENST00000488186 DQX1Q8TE96 717 aaKnown RBP16.41■□□□□ 0.22
C9orf3-219ENST00000488186 ATP2A3Q93084 1043 aa16.41■□□□□ 0.22
C9orf3-219ENST00000488186 ZFRQ96KR1 1074 aaKnown RBP16.41■□□□□ 0.22
C9orf3-219ENST00000488186 SLC2A13Q96QE2 648 aa16.41■□□□□ 0.22
C9orf3-219ENST00000488186 NHEJ1Q9H9Q4 299 aaPredicted RBP16.41■□□□□ 0.22
C9orf3-219ENST00000488186 TRPV5Q9NQA5 729 aa16.41■□□□□ 0.22
C9orf3-219ENST00000488186 COX16Q9P0S2 106 aa16.41■□□□□ 0.22
C9orf3-219ENST00000488186 WNT16Q9UBV4 365 aa16.41■□□□□ 0.22
C9orf3-219ENST00000488186 WNT6Q9Y6F9 365 aa16.41■□□□□ 0.22
C9orf3-219ENST00000488186 A0A087X0T9 212 aa16.4■□□□□ 0.22
C9orf3-219ENST00000488186 PRR33A8MZF0 331 aa16.4■□□□□ 0.22
C9orf3-219ENST00000488186 SCAMP3O14828 347 aaKnown RBP16.4■□□□□ 0.22
C9orf3-219ENST00000488186 MSI1O43347 362 aaKnown RBP16.4■□□□□ 0.22
C9orf3-219ENST00000488186 STC2O76061 302 aa16.4■□□□□ 0.22
C9orf3-219ENST00000488186 NFATC1O95644 943 aa16.4■□□□□ 0.22
C9orf3-219ENST00000488186 TRUB2O95900 331 aaKnown RBP16.4■□□□□ 0.22
C9orf3-219ENST00000488186 FAM228BP0C875 321 aa16.4■□□□□ 0.22
C9orf3-219ENST00000488186 MYBL1P10243 752 aa16.4■□□□□ 0.22
C9orf3-219ENST00000488186 MRE11P49959 708 aa16.4■□□□□ 0.22
C9orf3-219ENST00000488186 PTP4A2Q12974 167 aa16.4■□□□□ 0.22
C9orf3-219ENST00000488186 MAPK8IP2Q13387 824 aaPredicted RBP16.4■□□□□ 0.22
C9orf3-219ENST00000488186 TRIP4Q15650 581 aaPredicted RBP16.4■□□□□ 0.22
C9orf3-219ENST00000488186 HTR3DQ70Z44 454 aa16.4■□□□□ 0.22
C9orf3-219ENST00000488186 CPA6Q8N4T0 437 aa16.4■□□□□ 0.22
C9orf3-219ENST00000488186 C3orf20Q8ND61 904 aa16.4■□□□□ 0.22
C9orf3-219ENST00000488186 ZNF653Q96CK0 615 aa16.4■□□□□ 0.22
C9orf3-219ENST00000488186 OTUB2Q96DC9 234 aa16.4■□□□□ 0.22
C9orf3-219ENST00000488186 PANX2Q96RD6 677 aa16.4■□□□□ 0.22
C9orf3-219ENST00000488186 CHP1Q99653 195 aa16.4■□□□□ 0.22
C9orf3-219ENST00000488186 LINC00597Q9H2U6 94 aa16.4■□□□□ 0.22
C9orf3-219ENST00000488186 SMOC2Q9H3U7 446 aa16.4■□□□□ 0.22
C9orf3-219ENST00000488186 EBF3Q9H4W6 596 aa16.4■□□□□ 0.22
C9orf3-219ENST00000488186 PARVAQ9NVD7 372 aa16.4■□□□□ 0.22
C9orf3-219ENST00000488186 DDIT4Q9NX09 232 aa16.4■□□□□ 0.22
C9orf3-219ENST00000488186 MYO1AQ9UBC5 1043 aa16.4■□□□□ 0.22
C9orf3-219ENST00000488186 CNOT8Q9UFF9 292 aaKnown RBP16.4■□□□□ 0.22
C9orf3-219ENST00000488186 SLC12A6Q9UHW9 1150 aa16.4■□□□□ 0.22
C9orf3-219ENST00000488186 ZDBF2Q9HCK1 2354 aa16.4■□□□□ 0.22
C9orf3-219ENST00000488186 SIGLEC16A6NMB1 481 aa16.39■□□□□ 0.21
C9orf3-219ENST00000488186 M0QYT0 321 aa16.39■□□□□ 0.21
C9orf3-219ENST00000488186 STK25O00506 426 aa16.39■□□□□ 0.21
C9orf3-219ENST00000488186 APOEP02649 317 aa16.39■□□□□ 0.21
C9orf3-219ENST00000488186 PDGFRAP16234 1089 aa16.39■□□□□ 0.21
C9orf3-219ENST00000488186 ABCB4P21439 1286 aa16.39■□□□□ 0.21
C9orf3-219ENST00000488186 RRM1P23921 792 aa16.39■□□□□ 0.21
C9orf3-219ENST00000488186 CORO1AP31146 461 aaKnown RBP16.39■□□□□ 0.21
C9orf3-219ENST00000488186 SLC11A2P49281 568 aa16.39■□□□□ 0.21
C9orf3-219ENST00000488186 SULT1E1P49888 294 aa16.39■□□□□ 0.21
C9orf3-219ENST00000488186 MLLT6P55198 1093 aaPredicted RBP16.39■□□□□ 0.21
C9orf3-219ENST00000488186 AMPD2Q01433 879 aa16.39■□□□□ 0.21
C9orf3-219ENST00000488186 GFPT1Q06210 699 aaPredicted RBP16.39■□□□□ 0.21
C9orf3-219ENST00000488186 NME3Q13232 169 aa16.39■□□□□ 0.21
C9orf3-219ENST00000488186 RUNX3Q13761 415 aa16.39■□□□□ 0.21
C9orf3-219ENST00000488186 SLC18A3Q16572 532 aa16.39■□□□□ 0.21
C9orf3-219ENST00000488186 ITPRIPL2Q3MIP1 535 aa16.39■□□□□ 0.21
C9orf3-219ENST00000488186 SLC44A4Q53GD3 710 aa16.39■□□□□ 0.21
C9orf3-219ENST00000488186 NUGGCQ68CJ6 796 aa16.39■□□□□ 0.21
C9orf3-219ENST00000488186 TRIM68Q6AZZ1 485 aa16.39■□□□□ 0.21
C9orf3-219ENST00000488186 TAC4Q86UU9 113 aa16.39■□□□□ 0.21
C9orf3-219ENST00000488186 DENND1CQ8IV53 801 aa16.39■□□□□ 0.21
C9orf3-219ENST00000488186 TTC8Q8TAM2 541 aa16.39■□□□□ 0.21
C9orf3-219ENST00000488186 DNASE1L2Q92874 299 aa16.39■□□□□ 0.21
C9orf3-219ENST00000488186 ASIC4Q96FT7 647 aa16.39■□□□□ 0.21
C9orf3-219ENST00000488186 FAM83CQ9BQN1 747 aa16.39■□□□□ 0.21
C9orf3-219ENST00000488186 DDX23Q9BUQ8 820 aaKnown RBP16.39■□□□□ 0.21
C9orf3-219ENST00000488186 ISCUQ9H1K1 167 aa16.39■□□□□ 0.21
C9orf3-219ENST00000488186 MRPL47Q9HD33 250 aaKnown RBP16.39■□□□□ 0.21
C9orf3-219ENST00000488186 TMEM51Q9NW97 253 aa16.39■□□□□ 0.21
C9orf3-219ENST00000488186 CA14Q9ULX7 337 aa16.39■□□□□ 0.21
C9orf3-219ENST00000488186 TLR6Q9Y2C9 796 aa16.39■□□□□ 0.21
C9orf3-219ENST00000488186 SCINQ9Y6U3 715 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms