RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 TTYH3Q9C0H2 523 aa16.17■□□□□ 0.18
C9orf3-217ENST00000479161 CHRDQ9H2X0 955 aa16.17■□□□□ 0.18
C9orf3-217ENST00000479161 TSPY26PQ9H489 355 aa16.17■□□□□ 0.18
C9orf3-217ENST00000479161 SPHK2Q9NRA0 654 aa16.17■□□□□ 0.18
C9orf3-217ENST00000479161 COL4A3Q01955 1670 aa16.16■□□□□ 0.18
C9orf3-217ENST00000479161 HSF2BPO75031 334 aa16.16■□□□□ 0.18
C9orf3-217ENST00000479161 GFPT2O94808 682 aa16.16■□□□□ 0.18
C9orf3-217ENST00000479161 CYP1A1P04798 512 aaPredicted RBP16.16■□□□□ 0.18
C9orf3-217ENST00000479161 FERP16591 822 aa16.16■□□□□ 0.18
C9orf3-217ENST00000479161 CD72P21854 359 aa16.16■□□□□ 0.18
C9orf3-217ENST00000479161 UBASH3AP57075 661 aa16.16■□□□□ 0.18
C9orf3-217ENST00000479161 GAD2Q05329 585 aa16.16■□□□□ 0.18
C9orf3-217ENST00000479161 GRSF1Q12849 480 aaKnown RBP eCLIP16.16■□□□□ 0.18
C9orf3-217ENST00000479161 MTA1Q13330 715 aa16.16■□□□□ 0.18
C9orf3-217ENST00000479161 EIF4EBP2Q13542 120 aaPredicted RBP16.16■□□□□ 0.18
C9orf3-217ENST00000479161 GAB4Q2WGN9 574 aa16.16■□□□□ 0.18
C9orf3-217ENST00000479161 PPP1R2P3Q6NXS1 205 aa16.16■□□□□ 0.18
C9orf3-217ENST00000479161 TOGARAM2Q6ZUX3 1019 aa16.16■□□□□ 0.18
C9orf3-217ENST00000479161 MIB1Q86YT6 1006 aa16.16■□□□□ 0.18
C9orf3-217ENST00000479161 UNC45BQ8IWX7 931 aa16.16■□□□□ 0.18
C9orf3-217ENST00000479161 BBS7Q8IWZ6 715 aa16.16■□□□□ 0.18
C9orf3-217ENST00000479161 BAP1Q92560 729 aa16.16■□□□□ 0.18
C9orf3-217ENST00000479161 NDRG1Q92597 394 aaKnown RBP16.16■□□□□ 0.18
C9orf3-217ENST00000479161 NUCKS1Q9H1E3 243 aaKnown RBP16.16■□□□□ 0.18
C9orf3-217ENST00000479161 PDCL3Q9H2J4 239 aa16.16■□□□□ 0.18
C9orf3-217ENST00000479161 RRN3Q9NYV6 651 aa16.16■□□□□ 0.18
C9orf3-217ENST00000479161 AIPL1Q9NZN9 384 aa16.16■□□□□ 0.18
C9orf3-217ENST00000479161 WDR35Q9P2L0 1181 aa16.16■□□□□ 0.18
C9orf3-217ENST00000479161 RASAL2Q9UJF2 1139 aa16.16■□□□□ 0.18
C9orf3-217ENST00000479161 NUDT5Q9UKK9 219 aa16.16■□□□□ 0.18
C9orf3-217ENST00000479161 MTF2Q9Y483 593 aaPredicted RBP16.16■□□□□ 0.18
C9orf3-217ENST00000479161 A0A1W2PQJ5 194 aa16.15■□□□□ 0.18
C9orf3-217ENST00000479161 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.15■□□□□ 0.18
C9orf3-217ENST00000479161 MDM4O15151 490 aa16.15■□□□□ 0.18
C9orf3-217ENST00000479161 IGLV3-25P01717 112 aa16.15■□□□□ 0.18
C9orf3-217ENST00000479161 KLKB1P03952 638 aa16.15■□□□□ 0.18
C9orf3-217ENST00000479161 TPM3P06753 285 aa16.15■□□□□ 0.18
C9orf3-217ENST00000479161 NCAM1P13591 858 aa16.15■□□□□ 0.18
C9orf3-217ENST00000479161 CHRNB2P17787 502 aa16.15■□□□□ 0.18
C9orf3-217ENST00000479161 HOXD11P31277 338 aaPredicted RBP16.15■□□□□ 0.18
C9orf3-217ENST00000479161 SOX9P48436 509 aa16.15■□□□□ 0.18
C9orf3-217ENST00000479161 HARS2P49590 506 aaKnown RBP16.15■□□□□ 0.18
C9orf3-217ENST00000479161 NOMO3P69849 1222 aa16.15■□□□□ 0.18
C9orf3-217ENST00000479161 FMO1Q01740 532 aa16.15■□□□□ 0.18
C9orf3-217ENST00000479161 SLC6A3Q01959 620 aa16.15■□□□□ 0.18
C9orf3-217ENST00000479161 PTPN20Q4JDL3 420 aa16.15■□□□□ 0.18
C9orf3-217ENST00000479161 NUGGCQ68CJ6 796 aa16.15■□□□□ 0.18
C9orf3-217ENST00000479161 OLFML1Q6UWY5 402 aa16.15■□□□□ 0.18
C9orf3-217ENST00000479161 IRF2BP2Q7Z5L9 587 aa16.15■□□□□ 0.18
C9orf3-217ENST00000479161 ERICH1Q86X53 443 aa16.15■□□□□ 0.18
C9orf3-217ENST00000479161 CLEC4CQ8WTT0 213 aa16.15■□□□□ 0.18
C9orf3-217ENST00000479161 EDEM1Q92611 657 aa16.15■□□□□ 0.18
C9orf3-217ENST00000479161 CD101Q93033 1021 aa16.15■□□□□ 0.18
C9orf3-217ENST00000479161 WBP2Q969T9 261 aa16.15■□□□□ 0.18
C9orf3-217ENST00000479161 C18orf8Q96DM3 657 aa16.15■□□□□ 0.18
C9orf3-217ENST00000479161 SERPINB11Q96P15 392 aa16.15■□□□□ 0.18
C9orf3-217ENST00000479161 SLC2A13Q96QE2 648 aa16.15■□□□□ 0.18
C9orf3-217ENST00000479161 P2RY13Q9BPV8 354 aa16.15■□□□□ 0.18
C9orf3-217ENST00000479161 LMAN1LQ9HAT1 526 aa16.15■□□□□ 0.18
C9orf3-217ENST00000479161 TLR6Q9Y2C9 796 aa16.15■□□□□ 0.18
C9orf3-217ENST00000479161 MYO18AQ92614 2054 aaKnown RBP16.15■□□□□ 0.18
C9orf3-217ENST00000479161 KIAA1549LQ6ZVL6 1849 aa16.15■□□□□ 0.18
C9orf3-217ENST00000479161 SLC12A8A0AV02 714 aa16.14■□□□□ 0.17
C9orf3-217ENST00000479161 PAPSS2O95340 614 aaPredicted RBP16.14■□□□□ 0.17
C9orf3-217ENST00000479161 DCNP07585 359 aaKnown RBP16.14■□□□□ 0.17
C9orf3-217ENST00000479161 MMEP08473 750 aa16.14■□□□□ 0.17
C9orf3-217ENST00000479161 ADH5P11766 374 aa16.14■□□□□ 0.17
C9orf3-217ENST00000479161 UNGP13051 313 aaPredicted RBP16.14■□□□□ 0.17
C9orf3-217ENST00000479161 MMP8P22894 467 aa16.14■□□□□ 0.17
C9orf3-217ENST00000479161 OPRD1P41143 372 aa16.14■□□□□ 0.17
C9orf3-217ENST00000479161 PRKCIP41743 596 aa16.14■□□□□ 0.17
C9orf3-217ENST00000479161 GALK1P51570 392 aa16.14■□□□□ 0.17
C9orf3-217ENST00000479161 PTPN5P54829 565 aa16.14■□□□□ 0.17
C9orf3-217ENST00000479161 GSCP56915 257 aaPredicted RBP16.14■□□□□ 0.17
C9orf3-217ENST00000479161 LY6G5CQ5SRR4 150 aa16.14■□□□□ 0.17
C9orf3-217ENST00000479161 PASD1Q8IV76 773 aa16.14■□□□□ 0.17
C9orf3-217ENST00000479161 C1orf210Q8IVY1 113 aa16.14■□□□□ 0.17
C9orf3-217ENST00000479161 ETFBKMTQ8IXQ9 262 aa16.14■□□□□ 0.17
C9orf3-217ENST00000479161 KCNV2Q8TDN2 545 aa16.14■□□□□ 0.17
C9orf3-217ENST00000479161 SYN2Q92777 582 aaPredicted RBP16.14■□□□□ 0.17
C9orf3-217ENST00000479161 FAM149B1Q96BN6 582 aa16.14■□□□□ 0.17
C9orf3-217ENST00000479161 FAM122AQ96E09 287 aa16.14■□□□□ 0.17
C9orf3-217ENST00000479161 SLC39A13Q96H72 371 aa16.14■□□□□ 0.17
C9orf3-217ENST00000479161 FBXO10Q9UK96 956 aa16.14■□□□□ 0.17
C9orf3-217ENST00000479161 FBXO4Q9UKT5 387 aa16.14■□□□□ 0.17
C9orf3-217ENST00000479161 FANCMQ8IYD8 2048 aa16.14■□□□□ 0.17
C9orf3-217ENST00000479161 ITIH6Q6UXX5 1313 aa16.14■□□□□ 0.17
C9orf3-217ENST00000479161 CHURC1-FNTBB4DL54 471 aa16.13■□□□□ 0.17
C9orf3-217ENST00000479161 GFRA2O00451 464 aa16.13■□□□□ 0.17
C9orf3-217ENST00000479161 PIK3R2O00459 728 aa16.13■□□□□ 0.17
C9orf3-217ENST00000479161 CAPN9O14815 690 aa16.13■□□□□ 0.17
C9orf3-217ENST00000479161 CACNG3O60359 315 aa16.13■□□□□ 0.17
C9orf3-217ENST00000479161 ERBB2P04626 1255 aa16.13■□□□□ 0.17
C9orf3-217ENST00000479161 CORO1AP31146 461 aaKnown RBP16.13■□□□□ 0.17
C9orf3-217ENST00000479161 NOS2P35228 1153 aa16.13■□□□□ 0.17
C9orf3-217ENST00000479161 CENPCQ03188 943 aa16.13■□□□□ 0.17
C9orf3-217ENST00000479161 PON2Q15165 354 aa16.13■□□□□ 0.17
C9orf3-217ENST00000479161 ZNF528Q3MIS6 628 aa16.13■□□□□ 0.17
C9orf3-217ENST00000479161 ADGRF1Q5T601 910 aa16.13■□□□□ 0.17
C9orf3-217ENST00000479161 FSTL4Q6MZW2 842 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms