RNA–Protein interactions for RNA: ENST00000470268.1

SF3B1-208, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 2,003 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-208ENST00000470268 DNAJA2O60884 412 aa5.02□□□□□ -1.61
SF3B1-208ENST00000470268 ATP2C2O75185 946 aa5.02□□□□□ -1.61
SF3B1-208ENST00000470268 TACC1O75410 805 aa5.02□□□□□ -1.61
SF3B1-208ENST00000470268 TADA2AO75478 443 aa5.02□□□□□ -1.61
SF3B1-208ENST00000470268 CA3P07451 260 aa5.02□□□□□ -1.61
SF3B1-208ENST00000470268 NME1P15531 152 aaKnown RBP5.02□□□□□ -1.61
SF3B1-208ENST00000470268 TBXAS1P24557 533 aaPredicted RBP5.02□□□□□ -1.61
SF3B1-208ENST00000470268 ACAT1P24752 427 aaKnown RBP5.02□□□□□ -1.61
SF3B1-208ENST00000470268 HNRNPH3P31942 346 aaKnown RBP5.02□□□□□ -1.61
SF3B1-208ENST00000470268 BMP8BP34820 402 aa5.02□□□□□ -1.61
SF3B1-208ENST00000470268 USP8P40818 1118 aa5.02□□□□□ -1.61
SF3B1-208ENST00000470268 NDST1P52848 882 aa5.02□□□□□ -1.61
SF3B1-208ENST00000470268 RAD23BP54727 409 aa5.02□□□□□ -1.61
SF3B1-208ENST00000470268 TRIM14Q14142 442 aa5.02□□□□□ -1.61
SF3B1-208ENST00000470268 MEA1Q16626 185 aa5.02□□□□□ -1.61
SF3B1-208ENST00000470268 RTP2Q5QGT7 225 aa5.02□□□□□ -1.61
SF3B1-208ENST00000470268 SPOUT1Q5T280 376 aaKnown RBP5.02□□□□□ -1.61
SF3B1-208ENST00000470268 FAM171A1Q5VUB5 890 aa5.02□□□□□ -1.61
SF3B1-208ENST00000470268 SLC6A19Q695T7 634 aa5.02□□□□□ -1.61
SF3B1-208ENST00000470268 OVOS1Q6IE37 1185 aa5.02□□□□□ -1.61
SF3B1-208ENST00000470268 FUT10Q6P4F1 479 aa5.02□□□□□ -1.61
SF3B1-208ENST00000470268 RSPO2Q6UXX9 243 aaPredicted RBP5.02□□□□□ -1.61
SF3B1-208ENST00000470268 DSTYKQ6XUX3 929 aa5.02□□□□□ -1.61
SF3B1-208ENST00000470268 ENOSF1Q7L5Y1 443 aa5.02□□□□□ -1.61
SF3B1-208ENST00000470268 PPFIBP1Q86W92 1011 aa5.02□□□□□ -1.61
SF3B1-208ENST00000470268 PALB2Q86YC2 1186 aa5.02□□□□□ -1.61
SF3B1-208ENST00000470268 ADGRF2Q8IZF7 708 aa5.02□□□□□ -1.61
SF3B1-208ENST00000470268 TOP6BLQ8N6T0 577 aa5.02□□□□□ -1.61
SF3B1-208ENST00000470268 C12orf29Q8N999 325 aa5.02□□□□□ -1.61
SF3B1-208ENST00000470268 SLC4A11Q8NBS3 891 aa5.02□□□□□ -1.61
SF3B1-208ENST00000470268 CCDC150Q8NCX0 1101 aa5.02□□□□□ -1.61
SF3B1-208ENST00000470268 APPL2Q8NEU8 664 aa5.02□□□□□ -1.61
SF3B1-208ENST00000470268 OR8K1Q8NGG5 319 aa5.02□□□□□ -1.61
SF3B1-208ENST00000470268 OR10T2Q8NGX3 314 aa5.02□□□□□ -1.61
SF3B1-208ENST00000470268 SLC20A1Q8WUM9 679 aa5.02□□□□□ -1.61
SF3B1-208ENST00000470268 TFAP2BQ92481 460 aa5.02□□□□□ -1.61
SF3B1-208ENST00000470268 FAXDC2Q96IV6 333 aa5.02□□□□□ -1.61
SF3B1-208ENST00000470268 C16orf45Q96MC5 204 aaPredicted RBP5.02□□□□□ -1.61
SF3B1-208ENST00000470268 ZNF558Q96NG5 402 aa5.02□□□□□ -1.61
SF3B1-208ENST00000470268 TMEM209Q96SK2 561 aa5.02□□□□□ -1.61
SF3B1-208ENST00000470268 SYT11Q9BT88 431 aa5.02□□□□□ -1.61
SF3B1-208ENST00000470268 COLEC11Q9BWP8 271 aa5.02□□□□□ -1.61
SF3B1-208ENST00000470268 TRIM55Q9BYV6 548 aa5.02□□□□□ -1.61
SF3B1-208ENST00000470268 CYP3A43Q9HB55 503 aa5.02□□□□□ -1.61
SF3B1-208ENST00000470268 PIDD1Q9HB75 910 aa5.02□□□□□ -1.61
SF3B1-208ENST00000470268 ACTR10Q9NZ32 417 aa5.02□□□□□ -1.61
SF3B1-208ENST00000470268 AIPL1Q9NZN9 384 aa5.02□□□□□ -1.61
SF3B1-208ENST00000470268 TJP2Q9UDY2 1190 aa5.02□□□□□ -1.61
SF3B1-208ENST00000470268 STXBP5LQ9Y2K9 1186 aa5.02□□□□□ -1.61
SF3B1-208ENST00000470268 PCDHB4Q9Y5E5 795 aa5.02□□□□□ -1.61
SF3B1-208ENST00000470268 A0A0U1RQJ8 604 aa5.01□□□□□ -1.61
SF3B1-208ENST00000470268 FAM170AA1A519 330 aa5.01□□□□□ -1.61
SF3B1-208ENST00000470268 GOLGA6L6A8MZA4 724 aa5.01□□□□□ -1.61
SF3B1-208ENST00000470268 HUS1O60921 280 aa5.01□□□□□ -1.61
SF3B1-208ENST00000470268 FGF18O76093 207 aa5.01□□□□□ -1.61
SF3B1-208ENST00000470268 PDGFRBP09619 1106 aa5.01□□□□□ -1.61
SF3B1-208ENST00000470268 KRT5P13647 590 aa5.01□□□□□ -1.61
SF3B1-208ENST00000470268 P4HA1P13674 534 aa5.01□□□□□ -1.61
SF3B1-208ENST00000470268 CYP11B1P15538 503 aa5.01□□□□□ -1.61
SF3B1-208ENST00000470268 LAG3P18627 525 aa5.01□□□□□ -1.61
SF3B1-208ENST00000470268 WARSP23381 471 aaKnown RBP5.01□□□□□ -1.61
SF3B1-208ENST00000470268 DNAJB1P25685 340 aa5.01□□□□□ -1.61
SF3B1-208ENST00000470268 GNL1P36915 607 aaPredicted RBP5.01□□□□□ -1.61
SF3B1-208ENST00000470268 CCNFP41002 786 aa5.01□□□□□ -1.61
SF3B1-208ENST00000470268 PRKCIP41743 596 aa5.01□□□□□ -1.61
SF3B1-208ENST00000470268 STAT1P42224 750 aa5.01□□□□□ -1.61
SF3B1-208ENST00000470268 PREPP48147 710 aa5.01□□□□□ -1.61
SF3B1-208ENST00000470268 PSMC1P62191 440 aaKnown RBP5.01□□□□□ -1.61
SF3B1-208ENST00000470268 TAP1Q03518 808 aa5.01□□□□□ -1.61
SF3B1-208ENST00000470268 CAMK1Q14012 370 aa5.01□□□□□ -1.61
SF3B1-208ENST00000470268 MTF1Q14872 753 aa5.01□□□□□ -1.61
SF3B1-208ENST00000470268 SFMBT2Q5VUG0 894 aa5.01□□□□□ -1.61
SF3B1-208ENST00000470268 NLRC3Q7RTR2 1065 aa5.01□□□□□ -1.61
SF3B1-208ENST00000470268 ZNF571Q7Z3V5 609 aaPredicted RBP5.01□□□□□ -1.61
SF3B1-208ENST00000470268 ACOT1Q86TX2 421 aa5.01□□□□□ -1.61
SF3B1-208ENST00000470268 LRRTM3Q86VH5 581 aa5.01□□□□□ -1.61
SF3B1-208ENST00000470268 CEP57Q86XR8 500 aa5.01□□□□□ -1.61
SF3B1-208ENST00000470268 DNAAF5Q86Y56 855 aa5.01□□□□□ -1.61
SF3B1-208ENST00000470268 CNGA4Q8IV77 575 aa5.01□□□□□ -1.61
SF3B1-208ENST00000470268 TDHQ8IZJ6 230 aa5.01□□□□□ -1.61
SF3B1-208ENST00000470268 OR6B3Q8NGW1 331 aa5.01□□□□□ -1.61
SF3B1-208ENST00000470268 HNRNPLLQ8WVV9 542 aaKnown RBP5.01□□□□□ -1.61
SF3B1-208ENST00000470268 ATRIPQ8WXE1 791 aa5.01□□□□□ -1.61
SF3B1-208ENST00000470268 DDX1Q92499 740 aaKnown RBP5.01□□□□□ -1.61
SF3B1-208ENST00000470268 ISL2Q96A47 359 aa5.01□□□□□ -1.61
SF3B1-208ENST00000470268 JAKMIP2Q96AA8 810 aa5.01□□□□□ -1.61
SF3B1-208ENST00000470268 IQCDQ96DY2 449 aa5.01□□□□□ -1.61
SF3B1-208ENST00000470268 TMEM176AQ96HP8 235 aa5.01□□□□□ -1.61
SF3B1-208ENST00000470268 MYRFLQ96LU7 910 aa5.01□□□□□ -1.61
SF3B1-208ENST00000470268 FAM83CQ9BQN1 747 aa5.01□□□□□ -1.61
SF3B1-208ENST00000470268 HAUS4Q9H6D7 363 aa5.01□□□□□ -1.61
SF3B1-208ENST00000470268 CRTAC1Q9NQ79 661 aa5.01□□□□□ -1.61
SF3B1-208ENST00000470268 CHST7Q9NS84 486 aa5.01□□□□□ -1.61
SF3B1-208ENST00000470268 SPTLC3Q9NUV7 552 aa5.01□□□□□ -1.61
SF3B1-208ENST00000470268 DDX43Q9NXZ2 648 aaKnown RBP5.01□□□□□ -1.61
SF3B1-208ENST00000470268 NOCTQ9UK39 431 aaKnown RBP5.01□□□□□ -1.61
SF3B1-208ENST00000470268 MTUS1Q9ULD2 1270 aa5.01□□□□□ -1.61
SF3B1-208ENST00000470268 MYO6Q9UM54 1294 aa5.01□□□□□ -1.61
SF3B1-208ENST00000470268 BARX2Q9UMQ3 279 aaPredicted RBP5.01□□□□□ -1.61
SF3B1-208ENST00000470268 DAAM1Q9Y4D1 1078 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms