RNA–Protein interactions for RNA: ENST00000460035.1

CCDC12-204, Transcript of coiled-coil domain containing 12, humanhuman

TSL 2

Gene CCDC12, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-204ENST00000460035 SLC44A4Q53GD3 710 aa11.33□□□□□ -0.6
CCDC12-204ENST00000460035 SLC26A9Q7LBE3 791 aa11.33□□□□□ -0.6
CCDC12-204ENST00000460035 DNAAF5Q86Y56 855 aa11.33□□□□□ -0.6
CCDC12-204ENST00000460035 MCOLN2Q8IZK6 566 aa11.33□□□□□ -0.6
CCDC12-204ENST00000460035 ADAM32Q8TC27 787 aa11.33□□□□□ -0.6
CCDC12-204ENST00000460035 DQX1Q8TE96 717 aaKnown RBP11.33□□□□□ -0.6
CCDC12-204ENST00000460035 OSCP1Q8WVF1 389 aa11.33□□□□□ -0.6
CCDC12-204ENST00000460035 RNF34Q969K3 372 aa11.33□□□□□ -0.6
CCDC12-204ENST00000460035 WBP2Q969T9 261 aa11.33□□□□□ -0.6
CCDC12-204ENST00000460035 SLC2A13Q96QE2 648 aa11.33□□□□□ -0.6
CCDC12-204ENST00000460035 SELENOOQ9BVL4 669 aa11.33□□□□□ -0.6
CCDC12-204ENST00000460035 DCLK3Q9C098 648 aa11.33□□□□□ -0.6
CCDC12-204ENST00000460035 EBF3Q9H4W6 596 aa11.33□□□□□ -0.6
CCDC12-204ENST00000460035 EPHX3Q9H6B9 360 aa11.33□□□□□ -0.6
CCDC12-204ENST00000460035 FAM204AQ9H8W3 233 aa11.33□□□□□ -0.6
CCDC12-204ENST00000460035 TRPV5Q9NQA5 729 aa11.33□□□□□ -0.6
CCDC12-204ENST00000460035 ABHD10Q9NUJ1 306 aa11.33□□□□□ -0.6
CCDC12-204ENST00000460035 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.33□□□□□ -0.6
CCDC12-204ENST00000460035 COX16Q9P0S2 106 aa11.33□□□□□ -0.6
CCDC12-204ENST00000460035 ARHGAP20Q9P2F6 1191 aa11.33□□□□□ -0.6
CCDC12-204ENST00000460035 WDR35Q9P2L0 1181 aa11.33□□□□□ -0.6
CCDC12-204ENST00000460035 TBC1D14Q9P2M4 693 aa11.33□□□□□ -0.6
CCDC12-204ENST00000460035 CA14Q9ULX7 337 aa11.33□□□□□ -0.6
CCDC12-204ENST00000460035 CHD5Q8TDI0 1954 aa11.33□□□□□ -0.6
CCDC12-204ENST00000460035 KMT2EQ8IZD2 1858 aa11.32□□□□□ -0.6
CCDC12-204ENST00000460035 ARNTLO00327 626 aa11.32□□□□□ -0.6
CCDC12-204ENST00000460035 AKR1B10O60218 316 aa11.32□□□□□ -0.6
CCDC12-204ENST00000460035 STC2O76061 302 aa11.32□□□□□ -0.6
CCDC12-204ENST00000460035 TRUB2O95900 331 aaKnown RBP11.32□□□□□ -0.6
CCDC12-204ENST00000460035 KRT3P12035 628 aa11.32□□□□□ -0.6
CCDC12-204ENST00000460035 ARSAP15289 507 aa11.32□□□□□ -0.6
CCDC12-204ENST00000460035 GBP1P32455 592 aa11.32□□□□□ -0.6
CCDC12-204ENST00000460035 NOS2P35228 1153 aa11.32□□□□□ -0.6
CCDC12-204ENST00000460035 HARS2P49590 506 aaKnown RBP11.32□□□□□ -0.6
CCDC12-204ENST00000460035 TBX4P57082 545 aa11.32□□□□□ -0.6
CCDC12-204ENST00000460035 C1QBPQ07021 282 aaKnown RBP11.32□□□□□ -0.6
CCDC12-204ENST00000460035 SIGLEC14Q08ET2 396 aa11.32□□□□□ -0.6
CCDC12-204ENST00000460035 NR1H3Q13133 447 aa11.32□□□□□ -0.6
CCDC12-204ENST00000460035 RUNX3Q13761 415 aa11.32□□□□□ -0.6
CCDC12-204ENST00000460035 TRIP4Q15650 581 aaPredicted RBP11.32□□□□□ -0.6
CCDC12-204ENST00000460035 ITPRIPL2Q3MIP1 535 aa11.32□□□□□ -0.6
CCDC12-204ENST00000460035 CCDC122Q5T0U0 273 aa11.32□□□□□ -0.6
CCDC12-204ENST00000460035 WDR59Q6PJI9 974 aa11.32□□□□□ -0.6
CCDC12-204ENST00000460035 TRIM67Q6ZTA4 783 aa11.32□□□□□ -0.6
CCDC12-204ENST00000460035 HTR3DQ70Z44 454 aa11.32□□□□□ -0.6
CCDC12-204ENST00000460035 MON1BQ7L1V2 547 aa11.32□□□□□ -0.6
CCDC12-204ENST00000460035 ARCQ7LC44 396 aa11.32□□□□□ -0.6
CCDC12-204ENST00000460035 DENND1CQ8IV53 801 aa11.32□□□□□ -0.6
CCDC12-204ENST00000460035 BBS7Q8IWZ6 715 aa11.32□□□□□ -0.6
CCDC12-204ENST00000460035 TC2NQ8N9U0 490 aa11.32□□□□□ -0.6
CCDC12-204ENST00000460035 DNASE1L2Q92874 299 aa11.32□□□□□ -0.6
CCDC12-204ENST00000460035 ASIC4Q96FT7 647 aa11.32□□□□□ -0.6
CCDC12-204ENST00000460035 VCPIP1Q96JH7 1222 aa11.32□□□□□ -0.6
CCDC12-204ENST00000460035 CCDC42Q96M95 316 aa11.32□□□□□ -0.6
CCDC12-204ENST00000460035 SERPINB11Q96P15 392 aa11.32□□□□□ -0.6
CCDC12-204ENST00000460035 CHP1Q99653 195 aa11.32□□□□□ -0.6
CCDC12-204ENST00000460035 FAM83CQ9BQN1 747 aa11.32□□□□□ -0.6
CCDC12-204ENST00000460035 METTL5Q9NRN9 209 aaKnown RBP11.32□□□□□ -0.6
CCDC12-204ENST00000460035 GTSE1Q9NYZ3 720 aa11.32□□□□□ -0.6
CCDC12-204ENST00000460035 WNT16Q9UBV4 365 aa11.32□□□□□ -0.6
CCDC12-204ENST00000460035 HBS1LQ9Y450 684 aaKnown RBP11.32□□□□□ -0.6
CCDC12-204ENST00000460035 NUP205Q92621 2012 aa11.31□□□□□ -0.6
CCDC12-204ENST00000460035 CACNA1IQ9P0X4 2223 aa11.31□□□□□ -0.6
CCDC12-204ENST00000460035 A0A087X0T9 212 aa11.31□□□□□ -0.6
CCDC12-204ENST00000460035 SSU72P8A0A1W2PR75 194 aa11.31□□□□□ -0.6
CCDC12-204ENST00000460035 GOLGA6L6A8MZA4 724 aa11.31□□□□□ -0.6
CCDC12-204ENST00000460035 M0QYT0 321 aa11.31□□□□□ -0.6
CCDC12-204ENST00000460035 GREM1O60565 184 aa11.31□□□□□ -0.6
CCDC12-204ENST00000460035 DAB1O75553 588 aa11.31□□□□□ -0.6
CCDC12-204ENST00000460035 GJB6O95452 261 aa11.31□□□□□ -0.6
CCDC12-204ENST00000460035 KLKB1P03952 638 aa11.31□□□□□ -0.6
CCDC12-204ENST00000460035 FAM228BP0C875 321 aa11.31□□□□□ -0.6
CCDC12-204ENST00000460035 CORO1AP31146 461 aaKnown RBP11.31□□□□□ -0.6
CCDC12-204ENST00000460035 MATKP42679 507 aa11.31□□□□□ -0.6
CCDC12-204ENST00000460035 SULT1E1P49888 294 aa11.31□□□□□ -0.6
CCDC12-204ENST00000460035 PITX1P78337 314 aaPredicted RBP11.31□□□□□ -0.6
CCDC12-204ENST00000460035 GFPT1Q06210 699 aaPredicted RBP11.31□□□□□ -0.6
CCDC12-204ENST00000460035 NME3Q13232 169 aa11.31□□□□□ -0.6
CCDC12-204ENST00000460035 MAPK8IP2Q13387 824 aaPredicted RBP11.31□□□□□ -0.6
CCDC12-204ENST00000460035 NNTQ13423 1086 aa11.31□□□□□ -0.6
CCDC12-204ENST00000460035 EML3Q32P44 896 aa11.31□□□□□ -0.6
CCDC12-204ENST00000460035 ZC3H12AQ5D1E8 599 aaKnown RBP11.31□□□□□ -0.6
CCDC12-204ENST00000460035 IER5LQ5T953 404 aa11.31□□□□□ -0.6
CCDC12-204ENST00000460035 DNAJC24Q6P3W2 148 aa11.31□□□□□ -0.6
CCDC12-204ENST00000460035 ALKBH5Q6P6C2 394 aaKnown RBP11.31□□□□□ -0.6
CCDC12-204ENST00000460035 DCUN1D2Q6PH85 259 aa11.31□□□□□ -0.6
CCDC12-204ENST00000460035 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.31□□□□□ -0.6
CCDC12-204ENST00000460035 TAC4Q86UU9 113 aa11.31□□□□□ -0.6
CCDC12-204ENST00000460035 UNC45BQ8IWX7 931 aa11.31□□□□□ -0.6
CCDC12-204ENST00000460035 ADGRG2Q8IZP9 1017 aa11.31□□□□□ -0.6
CCDC12-204ENST00000460035 SIX5Q8N196 739 aa11.31□□□□□ -0.6
CCDC12-204ENST00000460035 CPA6Q8N4T0 437 aa11.31□□□□□ -0.6
CCDC12-204ENST00000460035 EMC1Q8N766 993 aa11.31□□□□□ -0.6
CCDC12-204ENST00000460035 ATP2A3Q93084 1043 aa11.31□□□□□ -0.6
CCDC12-204ENST00000460035 PLD4Q96BZ4 506 aa11.31□□□□□ -0.6
CCDC12-204ENST00000460035 DDX23Q9BUQ8 820 aaKnown RBP11.31□□□□□ -0.6
CCDC12-204ENST00000460035 ECT2Q9H8V3 914 aa11.31□□□□□ -0.6
CCDC12-204ENST00000460035 NHEJ1Q9H9Q4 299 aaPredicted RBP11.31□□□□□ -0.6
CCDC12-204ENST00000460035 GRPEL1Q9HAV7 217 aa11.31□□□□□ -0.6
CCDC12-204ENST00000460035 HEBP1Q9NRV9 189 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms