RNA–Protein interactions for RNA: ENST00000442708.5

USP39-205, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-205ENST00000442708 TRIM67Q6ZTA4 783 aa16.73■□□□□ 0.27
USP39-205ENST00000442708 TOGARAM2Q6ZUX3 1019 aa16.73■□□□□ 0.27
USP39-205ENST00000442708 HTR3DQ70Z44 454 aa16.73■□□□□ 0.27
USP39-205ENST00000442708 BBS7Q8IWZ6 715 aa16.73■□□□□ 0.27
USP39-205ENST00000442708 MCOLN2Q8IZK6 566 aa16.73■□□□□ 0.27
USP39-205ENST00000442708 IRF7Q92985 503 aa16.73■□□□□ 0.27
USP39-205ENST00000442708 CHP1Q99653 195 aa16.73■□□□□ 0.27
USP39-205ENST00000442708 HEBP1Q9NRV9 189 aa16.73■□□□□ 0.27
USP39-205ENST00000442708 CALCOCO1Q9P1Z2 691 aa16.73■□□□□ 0.27
USP39-205ENST00000442708 WNT16Q9UBV4 365 aa16.73■□□□□ 0.27
USP39-205ENST00000442708 ADAMTS1Q9UHI8 967 aa16.73■□□□□ 0.27
USP39-205ENST00000442708 STRIP2Q9ULQ0 834 aa16.73■□□□□ 0.27
USP39-205ENST00000442708 SH3BP1Q9Y3L3 701 aa16.73■□□□□ 0.27
USP39-205ENST00000442708 BZW2Q9Y6E2 419 aaKnown RBP16.73■□□□□ 0.27
USP39-205ENST00000442708 PDGFBP01127 241 aaPredicted RBP16.72■□□□□ 0.27
USP39-205ENST00000442708 IGLV3-25P01717 112 aa16.72■□□□□ 0.27
USP39-205ENST00000442708 IGLV3-27P01718 113 aa16.72■□□□□ 0.27
USP39-205ENST00000442708 TPM1P09493 284 aa16.72■□□□□ 0.27
USP39-205ENST00000442708 FLT3P36888 993 aa16.72■□□□□ 0.27
USP39-205ENST00000442708 SOX9P48436 509 aa16.72■□□□□ 0.27
USP39-205ENST00000442708 GSCP56915 257 aaPredicted RBP16.72■□□□□ 0.27
USP39-205ENST00000442708 COG7P83436 770 aa16.72■□□□□ 0.27
USP39-205ENST00000442708 C1QBPQ07021 282 aaKnown RBP16.72■□□□□ 0.27
USP39-205ENST00000442708 EIF4EBP2Q13542 120 aaPredicted RBP16.72■□□□□ 0.27
USP39-205ENST00000442708 ASTE1Q2TB18 679 aaPredicted RBP16.72■□□□□ 0.27
USP39-205ENST00000442708 SLC44A4Q53GD3 710 aa16.72■□□□□ 0.27
USP39-205ENST00000442708 CC2D1AQ6P1N0 951 aaPredicted RBP16.72■□□□□ 0.27
USP39-205ENST00000442708 DRC7Q8IY82 874 aa16.72■□□□□ 0.27
USP39-205ENST00000442708 ADGRG2Q8IZP9 1017 aa16.72■□□□□ 0.27
USP39-205ENST00000442708 MSANTD4Q8NCY6 345 aa16.72■□□□□ 0.27
USP39-205ENST00000442708 JOSD2Q8TAC2 188 aa16.72■□□□□ 0.27
USP39-205ENST00000442708 DNASE1L2Q92874 299 aa16.72■□□□□ 0.27
USP39-205ENST00000442708 CHFRQ96EP1 664 aa16.72■□□□□ 0.27
USP39-205ENST00000442708 P2RY11Q96G91 374 aa16.72■□□□□ 0.27
USP39-205ENST00000442708 C11orf16Q9NQ32 467 aa16.72■□□□□ 0.27
USP39-205ENST00000442708 TRPV5Q9NQA5 729 aa16.72■□□□□ 0.27
USP39-205ENST00000442708 METTL5Q9NRN9 209 aaKnown RBP16.72■□□□□ 0.27
USP39-205ENST00000442708 NENFQ9UMX5 172 aa16.72■□□□□ 0.27
USP39-205ENST00000442708 MIA3Q5JRA6 1907 aa16.71■□□□□ 0.27
USP39-205ENST00000442708 CAPN9O14815 690 aa16.71■□□□□ 0.27
USP39-205ENST00000442708 ATMINO43313 823 aaPredicted RBP16.71■□□□□ 0.27
USP39-205ENST00000442708 TRUB2O95900 331 aaKnown RBP16.71■□□□□ 0.27
USP39-205ENST00000442708 FTLP02792 175 aaPredicted RBP16.71■□□□□ 0.27
USP39-205ENST00000442708 CALB1P05937 261 aa16.71■□□□□ 0.27
USP39-205ENST00000442708 GZMAP12544 262 aa16.71■□□□□ 0.27
USP39-205ENST00000442708 RRM1P23921 792 aa16.71■□□□□ 0.27
USP39-205ENST00000442708 CORO1AP31146 461 aaKnown RBP16.71■□□□□ 0.27
USP39-205ENST00000442708 MATKP42679 507 aa16.71■□□□□ 0.27
USP39-205ENST00000442708 IFNAR2P48551 515 aa16.71■□□□□ 0.27
USP39-205ENST00000442708 PFKPQ01813 784 aa16.71■□□□□ 0.27
USP39-205ENST00000442708 RUNX3Q13761 415 aa16.71■□□□□ 0.27
USP39-205ENST00000442708 PDGFRLQ15198 375 aa16.71■□□□□ 0.27
USP39-205ENST00000442708 GAB4Q2WGN9 574 aa16.71■□□□□ 0.27
USP39-205ENST00000442708 SIX5Q8N196 739 aa16.71■□□□□ 0.27
USP39-205ENST00000442708 EMC1Q8N766 993 aa16.71■□□□□ 0.27
USP39-205ENST00000442708 KIAA1958Q8N8K9 716 aa16.71■□□□□ 0.27
USP39-205ENST00000442708 FAM122AQ96E09 287 aa16.71■□□□□ 0.27
USP39-205ENST00000442708 FCRL2Q96LA5 508 aaPredicted RBP16.71■□□□□ 0.27
USP39-205ENST00000442708 NPY6RQ99463 290 aa16.71■□□□□ 0.27
USP39-205ENST00000442708 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.71■□□□□ 0.27
USP39-205ENST00000442708 TRIM62Q9BVG3 475 aa16.71■□□□□ 0.27
USP39-205ENST00000442708 ISCUQ9H1K1 167 aa16.71■□□□□ 0.27
USP39-205ENST00000442708 FBXL21Q9UKT6 434 aa16.71■□□□□ 0.27
USP39-205ENST00000442708 AGO1Q9UL18 857 aaKnown RBP16.71■□□□□ 0.27
USP39-205ENST00000442708 HBS1LQ9Y450 684 aaKnown RBP16.71■□□□□ 0.27
USP39-205ENST00000442708 FAM86C2PA6NEL3 165 aa16.7■□□□□ 0.26
USP39-205ENST00000442708 TMEM221A6NGB7 291 aa16.7■□□□□ 0.26
USP39-205ENST00000442708 M0R296 226 aa16.7■□□□□ 0.26
USP39-205ENST00000442708 IRAK2O43187 625 aa16.7■□□□□ 0.26
USP39-205ENST00000442708 RTN2O75298 545 aa16.7■□□□□ 0.26
USP39-205ENST00000442708 CYP17A1P05093 508 aa16.7■□□□□ 0.26
USP39-205ENST00000442708 CDC25BP30305 580 aa16.7■□□□□ 0.26
USP39-205ENST00000442708 HOXD11P31277 338 aaPredicted RBP16.7■□□□□ 0.26
USP39-205ENST00000442708 NOS2P35228 1153 aa16.7■□□□□ 0.26
USP39-205ENST00000442708 TBX4P57082 545 aa16.7■□□□□ 0.26
USP39-205ENST00000442708 MAPK8IP2Q13387 824 aaPredicted RBP16.7■□□□□ 0.26
USP39-205ENST00000442708 MLF2Q15773 248 aaPredicted RBP16.7■□□□□ 0.26
USP39-205ENST00000442708 ITPRIPL2Q3MIP1 535 aa16.7■□□□□ 0.26
USP39-205ENST00000442708 RAB6CQ53S08 254 aa16.7■□□□□ 0.26
USP39-205ENST00000442708 PPP1R15BQ5SWA1 713 aa16.7■□□□□ 0.26
USP39-205ENST00000442708 NAIF1Q69YI7 327 aaPredicted RBP16.7■□□□□ 0.26
USP39-205ENST00000442708 TXNDC11Q6PKC3 985 aa16.7■□□□□ 0.26
USP39-205ENST00000442708 DENND1CQ8IV53 801 aa16.7■□□□□ 0.26
USP39-205ENST00000442708 CNGA4Q8IV77 575 aa16.7■□□□□ 0.26
USP39-205ENST00000442708 ATP2A3Q93084 1043 aa16.7■□□□□ 0.26
USP39-205ENST00000442708 NT5C3BQ969T7 300 aa16.7■□□□□ 0.26
USP39-205ENST00000442708 PLD4Q96BZ4 506 aa16.7■□□□□ 0.26
USP39-205ENST00000442708 SLC39A13Q96H72 371 aa16.7■□□□□ 0.26
USP39-205ENST00000442708 DDX23Q9BUQ8 820 aaKnown RBP16.7■□□□□ 0.26
USP39-205ENST00000442708 RAB6CQ9H0N0 254 aa16.7■□□□□ 0.26
USP39-205ENST00000442708 ECT2Q9H8V3 914 aa16.7■□□□□ 0.26
USP39-205ENST00000442708 ARHGEF3Q9NR81 526 aa16.7■□□□□ 0.26
USP39-205ENST00000442708 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.7■□□□□ 0.26
USP39-205ENST00000442708 TLR6Q9Y2C9 796 aa16.7■□□□□ 0.26
USP39-205ENST00000442708 SYNJ2BP-COX16A0A087WUM0 186 aa16.69■□□□□ 0.26
USP39-205ENST00000442708 CD72P21854 359 aa16.69■□□□□ 0.26
USP39-205ENST00000442708 RFC1P35251 1148 aaPredicted RBP16.69■□□□□ 0.26
USP39-205ENST00000442708 VCPP55072 806 aaKnown RBP16.69■□□□□ 0.26
USP39-205ENST00000442708 CDK17Q00537 523 aa16.69■□□□□ 0.26
USP39-205ENST00000442708 GFPT1Q06210 699 aaPredicted RBP16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms