RNA–Protein interactions for RNA: ENST00000430771.2

CHD4-202, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 527 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-202ENST00000430771 KIF26AQ9ULI4 1882 aaPredicted RBP11.47□□□□□ -0.57
CHD4-202ENST00000430771 SLC12A8A0AV02 714 aa11.47□□□□□ -0.57
CHD4-202ENST00000430771 GOLGA6L9A6NEM1 432 aa11.47□□□□□ -0.57
CHD4-202ENST00000430771 TMEM191CA6NGB0 347 aa11.47□□□□□ -0.57
CHD4-202ENST00000430771 M0QYT0 321 aa11.47□□□□□ -0.57
CHD4-202ENST00000430771 MYO1FO00160 1098 aa11.47□□□□□ -0.57
CHD4-202ENST00000430771 NRG2O14511 850 aaPredicted RBP11.47□□□□□ -0.57
CHD4-202ENST00000430771 MDM4O15151 490 aa11.47□□□□□ -0.57
CHD4-202ENST00000430771 F9P00740 461 aa11.47□□□□□ -0.57
CHD4-202ENST00000430771 IGLV3-25P01717 112 aa11.47□□□□□ -0.57
CHD4-202ENST00000430771 APOEP02649 317 aa11.47□□□□□ -0.57
CHD4-202ENST00000430771 FYNP06241 537 aa11.47□□□□□ -0.57
CHD4-202ENST00000430771 SLC2A3P11169 496 aa11.47□□□□□ -0.57
CHD4-202ENST00000430771 TCF3P15923 654 aa11.47□□□□□ -0.57
CHD4-202ENST00000430771 NOP2P46087 812 aaKnown RBP11.47□□□□□ -0.57
CHD4-202ENST00000430771 HADHBP55084 474 aaKnown RBP11.47□□□□□ -0.57
CHD4-202ENST00000430771 COG7P83436 770 aa11.47□□□□□ -0.57
CHD4-202ENST00000430771 DEUP1Q05D60 604 aa11.47□□□□□ -0.57
CHD4-202ENST00000430771 USP4Q13107 963 aa11.47□□□□□ -0.57
CHD4-202ENST00000430771 MTA1Q13330 715 aa11.47□□□□□ -0.57
CHD4-202ENST00000430771 PIGHQ14442 188 aaPredicted RBP11.47□□□□□ -0.57
CHD4-202ENST00000430771 TRIP4Q15650 581 aaPredicted RBP11.47□□□□□ -0.57
CHD4-202ENST00000430771 CDO1Q16878 200 aa11.47□□□□□ -0.57
CHD4-202ENST00000430771 HS1BP3Q53T59 392 aa11.47□□□□□ -0.57
CHD4-202ENST00000430771 SYPL2Q5VXT5 272 aa11.47□□□□□ -0.57
CHD4-202ENST00000430771 NUGGCQ68CJ6 796 aa11.47□□□□□ -0.57
CHD4-202ENST00000430771 ZNF662Q6ZS27 426 aa11.47□□□□□ -0.57
CHD4-202ENST00000430771 STRADAQ7RTN6 431 aa11.47□□□□□ -0.57
CHD4-202ENST00000430771 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.47□□□□□ -0.57
CHD4-202ENST00000430771 SLC35G2Q8TBE7 412 aa11.47□□□□□ -0.57
CHD4-202ENST00000430771 SMARCD2Q92925 531 aa11.47□□□□□ -0.57
CHD4-202ENST00000430771 KHSRPQ92945 711 aaKnown RBP eCLIP11.47□□□□□ -0.57
CHD4-202ENST00000430771 PGAP3Q96FM1 320 aaPredicted RBP11.47□□□□□ -0.57
CHD4-202ENST00000430771 ZNF830Q96NB3 372 aaPredicted RBP11.47□□□□□ -0.57
CHD4-202ENST00000430771 ASB16Q96NS5 453 aa11.47□□□□□ -0.57
CHD4-202ENST00000430771 MYADMQ96S97 322 aa11.47□□□□□ -0.57
CHD4-202ENST00000430771 CNPY3Q9BT09 278 aa11.47□□□□□ -0.57
CHD4-202ENST00000430771 SLC46A2Q9BY10 475 aa11.47□□□□□ -0.57
CHD4-202ENST00000430771 OBP2AQ9NY56 170 aa11.47□□□□□ -0.57
CHD4-202ENST00000430771 EPS15L1Q9UBC2 864 aa11.47□□□□□ -0.57
CHD4-202ENST00000430771 SFMBT1Q9UHJ3 866 aa11.47□□□□□ -0.57
CHD4-202ENST00000430771 NUDT5Q9UKK9 219 aa11.47□□□□□ -0.57
CHD4-202ENST00000430771 TLR6Q9Y2C9 796 aa11.47□□□□□ -0.57
CHD4-202ENST00000430771 PPP2R2CQ9Y2T4 447 aa11.47□□□□□ -0.57
CHD4-202ENST00000430771 SH3BP1Q9Y3L3 701 aa11.47□□□□□ -0.57
CHD4-202ENST00000430771 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.47□□□□□ -0.57
CHD4-202ENST00000430771 SYNJ2BP-COX16A0A087WUM0 186 aa11.46□□□□□ -0.57
CHD4-202ENST00000430771 MSI1O43347 362 aaKnown RBP11.46□□□□□ -0.57
CHD4-202ENST00000430771 RNF8O76064 485 aa11.46□□□□□ -0.57
CHD4-202ENST00000430771 LAMP2P13473 410 aa11.46□□□□□ -0.57
CHD4-202ENST00000430771 MAN1A1P33908 653 aa11.46□□□□□ -0.57
CHD4-202ENST00000430771 ARHGAP25P42331 645 aa11.46□□□□□ -0.57
CHD4-202ENST00000430771 NAP1L1P55209 391 aaKnown RBP11.46□□□□□ -0.57
CHD4-202ENST00000430771 TBX4P57082 545 aa11.46□□□□□ -0.57
CHD4-202ENST00000430771 ATP11AP98196 1134 aa11.46□□□□□ -0.57
CHD4-202ENST00000430771 RING1Q06587 406 aa11.46□□□□□ -0.57
CHD4-202ENST00000430771 NME3Q13232 169 aa11.46□□□□□ -0.57
CHD4-202ENST00000430771 ACAP1Q15027 740 aa11.46□□□□□ -0.57
CHD4-202ENST00000430771 OTUD1Q5VV17 481 aaPredicted RBP11.46□□□□□ -0.57
CHD4-202ENST00000430771 TRNP1Q6NT89 227 aa11.46□□□□□ -0.57
CHD4-202ENST00000430771 ARID3BQ8IVW6 561 aaPredicted RBP11.46□□□□□ -0.57
CHD4-202ENST00000430771 PLCD3Q8N3E9 789 aa11.46□□□□□ -0.57
CHD4-202ENST00000430771 CELF5Q8N6W0 485 aaKnown RBP11.46□□□□□ -0.57
CHD4-202ENST00000430771 KIAA1958Q8N8K9 716 aa11.46□□□□□ -0.57
CHD4-202ENST00000430771 NIPA2Q8N8Q9 360 aa11.46□□□□□ -0.57
CHD4-202ENST00000430771 ADAM32Q8TC27 787 aa11.46□□□□□ -0.57
CHD4-202ENST00000430771 FAM172AQ8WUF8 416 aa11.46□□□□□ -0.57
CHD4-202ENST00000430771 NT5C3BQ969T7 300 aa11.46□□□□□ -0.57
CHD4-202ENST00000430771 SLC22A12Q96S37 553 aa11.46□□□□□ -0.57
CHD4-202ENST00000430771 TBCBQ99426 244 aa11.46□□□□□ -0.57
CHD4-202ENST00000430771 DCLK3Q9C098 648 aa11.46□□□□□ -0.57
CHD4-202ENST00000430771 TRPV4Q9HBA0 871 aa11.46□□□□□ -0.57
CHD4-202ENST00000430771 OSGEPQ9NPF4 335 aa11.46□□□□□ -0.57
CHD4-202ENST00000430771 TDP1Q9NUW8 608 aa11.46□□□□□ -0.57
CHD4-202ENST00000430771 SMPD4Q9NXE4 827 aa11.46□□□□□ -0.57
CHD4-202ENST00000430771 COX16Q9P0S2 106 aa11.46□□□□□ -0.57
CHD4-202ENST00000430771 EYSQ5T1H1 3165 aa11.46□□□□□ -0.58
CHD4-202ENST00000430771 MACROD2A1Z1Q3 448 aa11.45□□□□□ -0.58
CHD4-202ENST00000430771 RCCD1A6NED2 376 aa11.45□□□□□ -0.58
CHD4-202ENST00000430771 LEFTY2O00292 366 aa11.45□□□□□ -0.58
CHD4-202ENST00000430771 PROSCO94903 275 aa11.45□□□□□ -0.58
CHD4-202ENST00000430771 PRAMEF12O95522 483 aa11.45□□□□□ -0.58
CHD4-202ENST00000430771 LATS1O95835 1130 aa11.45□□□□□ -0.58
CHD4-202ENST00000430771 TBX18O95935 607 aa11.45□□□□□ -0.58
CHD4-202ENST00000430771 IRF1P10914 325 aa11.45□□□□□ -0.58
CHD4-202ENST00000430771 IL9P15248 144 aa11.45□□□□□ -0.58
CHD4-202ENST00000430771 SP100P23497 879 aaPredicted RBP11.45□□□□□ -0.58
CHD4-202ENST00000430771 CCR1P32246 355 aa11.45□□□□□ -0.58
CHD4-202ENST00000430771 HARS2P49590 506 aaKnown RBP11.45□□□□□ -0.58
CHD4-202ENST00000430771 AIF1P55008 147 aa11.45□□□□□ -0.58
CHD4-202ENST00000430771 OGDHQ02218 1023 aa11.45□□□□□ -0.58
CHD4-202ENST00000430771 TFF2Q03403 129 aa11.45□□□□□ -0.58
CHD4-202ENST00000430771 PPP2R5DQ14738 602 aa11.45□□□□□ -0.58
CHD4-202ENST00000430771 ZNF77Q15935 545 aa11.45□□□□□ -0.58
CHD4-202ENST00000430771 C15orf59Q2T9L4 293 aaPredicted RBP11.45□□□□□ -0.58
CHD4-202ENST00000430771 ARL13BQ3SXY8 428 aa11.45□□□□□ -0.58
CHD4-202ENST00000430771 CCDC14Q49A88 953 aa11.45□□□□□ -0.58
CHD4-202ENST00000430771 FAM78AQ5JUQ0 283 aa11.45□□□□□ -0.58
CHD4-202ENST00000430771 BRMS1LQ5PSV4 323 aa11.45□□□□□ -0.58
CHD4-202ENST00000430771 C11orf63Q6NUN7 778 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms