RNA–Protein interactions for RNA: ENST00000422190.6

ATP2C1-203, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,386 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-203ENST00000422190 CSPG4P5Q96PW8 444 aa6.54□□□□□ -1.36
ATP2C1-203ENST00000422190 TMEM237Q96Q45 408 aa6.54□□□□□ -1.36
ATP2C1-203ENST00000422190 MED10Q9BTT4 135 aa6.54□□□□□ -1.36
ATP2C1-203ENST00000422190 SLC13A1Q9BZW2 595 aa6.54□□□□□ -1.36
ATP2C1-203ENST00000422190 FAM124BQ9H5Z6 455 aaPredicted RBP6.54□□□□□ -1.36
ATP2C1-203ENST00000422190 MANSC1Q9H8J5 431 aa6.54□□□□□ -1.36
ATP2C1-203ENST00000422190 UGT1A7Q9HAW7 530 aa6.54□□□□□ -1.36
ATP2C1-203ENST00000422190 UGT1A10Q9HAW8 530 aa6.54□□□□□ -1.36
ATP2C1-203ENST00000422190 UGT1A8Q9HAW9 530 aa6.54□□□□□ -1.36
ATP2C1-203ENST00000422190 SEPT10Q9P0V9 454 aa6.54□□□□□ -1.36
ATP2C1-203ENST00000422190 HAO1Q9UJM8 370 aa6.54□□□□□ -1.36
ATP2C1-203ENST00000422190 MYO18AQ92614 2054 aaKnown RBP6.54□□□□□ -1.36
ATP2C1-203ENST00000422190 A0A0G2JND7 137 aa6.54□□□□□ -1.36
ATP2C1-203ENST00000422190 XPOTO43592 962 aaKnown RBP6.54□□□□□ -1.36
ATP2C1-203ENST00000422190 CREB3O43889 395 aa6.54□□□□□ -1.36
ATP2C1-203ENST00000422190 CELF2O95319 508 aaKnown RBP6.54□□□□□ -1.36
ATP2C1-203ENST00000422190 TROVE2P10155 538 aaKnown RBP eCLIP6.54□□□□□ -1.36
ATP2C1-203ENST00000422190 TSHRP16473 764 aa6.54□□□□□ -1.36
ATP2C1-203ENST00000422190 BGNP21810 368 aa6.54□□□□□ -1.36
ATP2C1-203ENST00000422190 NDUFV1P49821 464 aa6.54□□□□□ -1.36
ATP2C1-203ENST00000422190 NME3Q13232 169 aa6.54□□□□□ -1.36
ATP2C1-203ENST00000422190 DPYSL2Q16555 572 aa6.54□□□□□ -1.36
ATP2C1-203ENST00000422190 CCL14Q16627 93 aa6.54□□□□□ -1.36
ATP2C1-203ENST00000422190 SLC45A4Q5BKX6 768 aa6.54□□□□□ -1.36
ATP2C1-203ENST00000422190 TRMT10BQ6PF06 316 aaKnown RBP6.54□□□□□ -1.36
ATP2C1-203ENST00000422190 RGS9BPQ6ZS82 235 aa6.54□□□□□ -1.36
ATP2C1-203ENST00000422190 DENND5BQ6ZUT9 1274 aa6.54□□□□□ -1.36
ATP2C1-203ENST00000422190 SLC26A11Q86WA9 606 aa6.54□□□□□ -1.36
ATP2C1-203ENST00000422190 ZDHHC17Q8IUH5 632 aa6.54□□□□□ -1.36
ATP2C1-203ENST00000422190 MPP5Q8N3R9 675 aa6.54□□□□□ -1.36
ATP2C1-203ENST00000422190 LGMNQ99538 433 aa6.54□□□□□ -1.36
ATP2C1-203ENST00000422190 NCAPGQ9BPX3 1015 aa6.54□□□□□ -1.36
ATP2C1-203ENST00000422190 POPDC2Q9HBU9 364 aa6.54□□□□□ -1.36
ATP2C1-203ENST00000422190 MTMR10Q9NXD2 777 aa6.54□□□□□ -1.36
ATP2C1-203ENST00000422190 FLRT1Q9NZU1 646 aa6.54□□□□□ -1.36
ATP2C1-203ENST00000422190 SLC45A1Q9Y2W3 748 aa6.54□□□□□ -1.36
ATP2C1-203ENST00000422190 TTLL3Q9Y4R7 772 aa6.54□□□□□ -1.36
ATP2C1-203ENST00000422190 IPPQ9Y573 584 aa6.54□□□□□ -1.36
ATP2C1-203ENST00000422190 DCAF8L1A6NGE4 600 aa6.53□□□□□ -1.36
ATP2C1-203ENST00000422190 SLC15A5A6NIM6 579 aa6.53□□□□□ -1.36
ATP2C1-203ENST00000422190 COPEO14579 308 aa6.53□□□□□ -1.36
ATP2C1-203ENST00000422190 TM9SF1O15321 606 aa6.53□□□□□ -1.36
ATP2C1-203ENST00000422190 SPAG6O75602 509 aa6.53□□□□□ -1.36
ATP2C1-203ENST00000422190 KRT37O76014 449 aa6.53□□□□□ -1.36
ATP2C1-203ENST00000422190 BEST1O76090 585 aa6.53□□□□□ -1.36
ATP2C1-203ENST00000422190 CBX6O95503 412 aa6.53□□□□□ -1.36
ATP2C1-203ENST00000422190 ACADSBP45954 432 aa6.53□□□□□ -1.36
ATP2C1-203ENST00000422190 LILRA4P59901 499 aa6.53□□□□□ -1.36
ATP2C1-203ENST00000422190 CRADDP78560 199 aa6.53□□□□□ -1.36
ATP2C1-203ENST00000422190 UBXN11Q5T124 520 aa6.53□□□□□ -1.36
ATP2C1-203ENST00000422190 SPRYD7Q5W111 196 aa6.53□□□□□ -1.36
ATP2C1-203ENST00000422190 WSCD1Q658N2 575 aa6.53□□□□□ -1.36
ATP2C1-203ENST00000422190 NLRP9Q7RTR0 991 aa6.53□□□□□ -1.36
ATP2C1-203ENST00000422190 B3GALNT2Q8NCR0 500 aa6.53□□□□□ -1.36
ATP2C1-203ENST00000422190 CCNYQ8ND76 341 aa6.53□□□□□ -1.36
ATP2C1-203ENST00000422190 RFWD2Q8NHY2 731 aa6.53□□□□□ -1.36
ATP2C1-203ENST00000422190 C10orf82Q8WW14 230 aa6.53□□□□□ -1.36
ATP2C1-203ENST00000422190 RTP4Q96DX8 246 aa6.53□□□□□ -1.36
ATP2C1-203ENST00000422190 TNIP3Q96KP6 325 aa6.53□□□□□ -1.36
ATP2C1-203ENST00000422190 TSSK1BQ9BXA7 367 aa6.53□□□□□ -1.36
ATP2C1-203ENST00000422190 LRRC4Q9HBW1 653 aa6.53□□□□□ -1.36
ATP2C1-203ENST00000422190 SSU72Q9NP77 194 aaKnown RBP6.53□□□□□ -1.36
ATP2C1-203ENST00000422190 SMYD2Q9NRG4 433 aa6.53□□□□□ -1.36
ATP2C1-203ENST00000422190 DTLQ9NZJ0 730 aa6.53□□□□□ -1.36
ATP2C1-203ENST00000422190 GNEQ9Y223 722 aaKnown RBP6.53□□□□□ -1.36
ATP2C1-203ENST00000422190 L3MBTL1Q9Y468 752 aa6.53□□□□□ -1.36
ATP2C1-203ENST00000422190 TIMM13Q9Y5L4 95 aaPredicted RBP6.53□□□□□ -1.36
ATP2C1-203ENST00000422190 DOCK3Q8IZD9 2030 aa6.53□□□□□ -1.36
ATP2C1-203ENST00000422190 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.53□□□□□ -1.36
ATP2C1-203ENST00000422190 MBLAC1A4D2B0 266 aaPredicted RBP6.53□□□□□ -1.36
ATP2C1-203ENST00000422190 MEIS3P2A8K0S8 358 aa6.53□□□□□ -1.36
ATP2C1-203ENST00000422190 CYB561D2O14569 222 aa6.53□□□□□ -1.36
ATP2C1-203ENST00000422190 DCTN3O75935 186 aa6.53□□□□□ -1.36
ATP2C1-203ENST00000422190 UNC5CO95185 931 aa6.53□□□□□ -1.36
ATP2C1-203ENST00000422190 APOEP02649 317 aa6.53□□□□□ -1.36
ATP2C1-203ENST00000422190 SNRPAP09012 282 aaKnown RBP6.53□□□□□ -1.36
ATP2C1-203ENST00000422190 ZFXP17010 805 aaPredicted RBP6.53□□□□□ -1.36
ATP2C1-203ENST00000422190 SLC8A3P57103 927 aa6.53□□□□□ -1.36
ATP2C1-203ENST00000422190 AP1B1Q10567 949 aa6.53□□□□□ -1.36
ATP2C1-203ENST00000422190 SV2CQ496J9 727 aa6.53□□□□□ -1.36
ATP2C1-203ENST00000422190 PLEKHG4Q58EX7 1191 aa6.53□□□□□ -1.36
ATP2C1-203ENST00000422190 EFHC1Q5JVL4 640 aa6.53□□□□□ -1.36
ATP2C1-203ENST00000422190 MROH9Q5TGP6 573 aa6.53□□□□□ -1.36
ATP2C1-203ENST00000422190 TTC39BQ5VTQ0 682 aaPredicted RBP6.53□□□□□ -1.36
ATP2C1-203ENST00000422190 UNC5AQ6ZN44 842 aa6.53□□□□□ -1.36
ATP2C1-203ENST00000422190 CDHR3Q6ZTQ4 885 aa6.53□□□□□ -1.36
ATP2C1-203ENST00000422190 MTDHQ86UE4 582 aaKnown RBP6.53□□□□□ -1.36
ATP2C1-203ENST00000422190 NME8Q8N427 588 aa6.53□□□□□ -1.36
ATP2C1-203ENST00000422190 C2orf69Q8N8R5 385 aa6.53□□□□□ -1.36
ATP2C1-203ENST00000422190 ADAM32Q8TC27 787 aa6.53□□□□□ -1.36
ATP2C1-203ENST00000422190 CENPIQ92674 756 aaPredicted RBP6.53□□□□□ -1.36
ATP2C1-203ENST00000422190 USP6NLQ92738 828 aa6.53□□□□□ -1.36
ATP2C1-203ENST00000422190 APOPT1Q96IL0 206 aa6.53□□□□□ -1.36
ATP2C1-203ENST00000422190 HSFY1Q96LI6 401 aa6.53□□□□□ -1.36
ATP2C1-203ENST00000422190 SRPK1Q96SB4 655 aaKnown RBP6.53□□□□□ -1.36
ATP2C1-203ENST00000422190 AP5M1Q9H0R1 490 aa6.53□□□□□ -1.36
ATP2C1-203ENST00000422190 VPS11Q9H270 941 aa6.53□□□□□ -1.36
ATP2C1-203ENST00000422190 TXLNGQ9NUQ3 528 aa6.53□□□□□ -1.36
ATP2C1-203ENST00000422190 PLXNA1Q9UIW2 1896 aa6.52□□□□□ -1.36
ATP2C1-203ENST00000422190 M0QYT0 321 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms