RNA–Protein interactions for RNA: ENST00000420121.5

SSBP3-206, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-206ENST00000420121 CCDC40Q4G0X9 1142 aa11.58□□□□□ -0.56
SSBP3-206ENST00000420121 C10orf76Q5T2E6 689 aa11.58□□□□□ -0.56
SSBP3-206ENST00000420121 FYB2Q5VWT5 728 aa11.58□□□□□ -0.56
SSBP3-206ENST00000420121 BTBD8Q5XKL5 378 aa11.58□□□□□ -0.56
SSBP3-206ENST00000420121 EGFLAMQ63HQ2 1017 aa11.58□□□□□ -0.56
SSBP3-206ENST00000420121 LCLAT1Q6UWP7 414 aa11.58□□□□□ -0.56
SSBP3-206ENST00000420121 FAM217AQ8IXS0 508 aa11.58□□□□□ -0.56
SSBP3-206ENST00000420121 FRMD1Q8N878 549 aa11.58□□□□□ -0.56
SSBP3-206ENST00000420121 ZNF513Q8N8E2 541 aaPredicted RBP11.58□□□□□ -0.56
SSBP3-206ENST00000420121 UBA3Q8TBC4 463 aa11.58□□□□□ -0.56
SSBP3-206ENST00000420121 NETO1Q8TDF5 533 aa11.58□□□□□ -0.56
SSBP3-206ENST00000420121 KCNV2Q8TDN2 545 aa11.58□□□□□ -0.56
SSBP3-206ENST00000420121 KCTD13Q8WZ19 329 aa11.58□□□□□ -0.56
SSBP3-206ENST00000420121 KREMEN1Q96MU8 473 aa11.58□□□□□ -0.56
SSBP3-206ENST00000420121 NT5C1BQ96P26 610 aa11.58□□□□□ -0.56
SSBP3-206ENST00000420121 DCBLD2Q96PD2 775 aa11.58□□□□□ -0.56
SSBP3-206ENST00000420121 RTKNQ9BST9 563 aa11.58□□□□□ -0.56
SSBP3-206ENST00000420121 BBS2Q9BXC9 721 aa11.58□□□□□ -0.56
SSBP3-206ENST00000420121 DNAI2Q9GZS0 605 aa11.58□□□□□ -0.56
SSBP3-206ENST00000420121 DNAJC17Q9NVM6 304 aaKnown RBP11.58□□□□□ -0.56
SSBP3-206ENST00000420121 RASAL2Q9UJF2 1139 aa11.58□□□□□ -0.56
SSBP3-206ENST00000420121 AGO1Q9UL18 857 aaKnown RBP11.58□□□□□ -0.56
SSBP3-206ENST00000420121 ADAMTS9Q9P2N4 1935 aa11.57□□□□□ -0.56
SSBP3-206ENST00000420121 BCLAF3A2AJT9 711 aaKnown RBP11.57□□□□□ -0.56
SSBP3-206ENST00000420121 YJEFN3A6XGL0 299 aa11.57□□□□□ -0.56
SSBP3-206ENST00000420121 E7ENQ6 273 aa11.57□□□□□ -0.56
SSBP3-206ENST00000420121 GFRA2O00451 464 aa11.57□□□□□ -0.56
SSBP3-206ENST00000420121 TM4SF5O14894 197 aa11.57□□□□□ -0.56
SSBP3-206ENST00000420121 PAEPP09466 180 aa11.57□□□□□ -0.56
SSBP3-206ENST00000420121 CD19P15391 556 aa11.57□□□□□ -0.56
SSBP3-206ENST00000420121 SDHBP21912 280 aa11.57□□□□□ -0.56
SSBP3-206ENST00000420121 CORO1AP31146 461 aaKnown RBP11.57□□□□□ -0.56
SSBP3-206ENST00000420121 YWHAEP62258 255 aaKnown RBP11.57□□□□□ -0.56
SSBP3-206ENST00000420121 COG7P83436 770 aa11.57□□□□□ -0.56
SSBP3-206ENST00000420121 GOLGA8FQ08AF8 430 aa11.57□□□□□ -0.56
SSBP3-206ENST00000420121 GOLGA8DPQ0D2H9 430 aa11.57□□□□□ -0.56
SSBP3-206ENST00000420121 ADIGQ0VDE8 80 aa11.57□□□□□ -0.56
SSBP3-206ENST00000420121 KCNH2Q12809 1159 aa11.57□□□□□ -0.56
SSBP3-206ENST00000420121 PAK1Q13153 545 aa11.57□□□□□ -0.56
SSBP3-206ENST00000420121 MAP7D1Q3KQU3 841 aa11.57□□□□□ -0.56
SSBP3-206ENST00000420121 EOGTQ5NDL2 527 aa11.57□□□□□ -0.56
SSBP3-206ENST00000420121 GRAMD4Q6IC98 578 aa11.57□□□□□ -0.56
SSBP3-206ENST00000420121 TCEAL6Q6IPX3 200 aa11.57□□□□□ -0.56
SSBP3-206ENST00000420121 PMF1Q6P1K2 205 aa11.57□□□□□ -0.56
SSBP3-206ENST00000420121 TMEM270Q6UE05 265 aa11.57□□□□□ -0.56
SSBP3-206ENST00000420121 SCML4Q8N228 414 aa11.57□□□□□ -0.56
SSBP3-206ENST00000420121 EHBP1Q8NDI1 1231 aa11.57□□□□□ -0.56
SSBP3-206ENST00000420121 SLC35F5Q8WV83 523 aa11.57□□□□□ -0.56
SSBP3-206ENST00000420121 RLN3Q8WXF3 142 aa11.57□□□□□ -0.56
SSBP3-206ENST00000420121 TCEAL3Q969E4 200 aa11.57□□□□□ -0.56
SSBP3-206ENST00000420121 CDK5RAP1Q96SZ6 601 aaKnown RBP11.57□□□□□ -0.56
SSBP3-206ENST00000420121 PLK2Q9NYY3 685 aa11.57□□□□□ -0.56
SSBP3-206ENST00000420121 MARCH2Q9P0N8 246 aa11.57□□□□□ -0.56
SSBP3-206ENST00000420121 WDR35Q9P2L0 1181 aa11.57□□□□□ -0.56
SSBP3-206ENST00000420121 MBD1Q9UIS9 605 aaPredicted RBP11.57□□□□□ -0.56
SSBP3-206ENST00000420121 KIAA1257Q9ULG3 409 aa11.57□□□□□ -0.56
SSBP3-206ENST00000420121 CLEC4EQ9ULY5 219 aa11.57□□□□□ -0.56
SSBP3-206ENST00000420121 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.57□□□□□ -0.56
SSBP3-206ENST00000420121 CNTN6Q9UQ52 1028 aa11.57□□□□□ -0.56
SSBP3-206ENST00000420121 BICDL2A1A5D9 508 aa11.56□□□□□ -0.56
SSBP3-206ENST00000420121 HMBSP08397 361 aa11.56□□□□□ -0.56
SSBP3-206ENST00000420121 SETSIPP0DME0 302 aa11.56□□□□□ -0.56
SSBP3-206ENST00000420121 GABRG2P18507 467 aa11.56□□□□□ -0.56
SSBP3-206ENST00000420121 BRD2P25440 801 aaKnown RBP11.56□□□□□ -0.56
SSBP3-206ENST00000420121 WASP42768 502 aa11.56□□□□□ -0.56
SSBP3-206ENST00000420121 LIMK1P53667 647 aa11.56□□□□□ -0.56
SSBP3-206ENST00000420121 DAOAP59103 153 aa11.56□□□□□ -0.56
SSBP3-206ENST00000420121 GCNT1Q02742 428 aa11.56□□□□□ -0.56
SSBP3-206ENST00000420121 TRIP4Q15650 581 aaPredicted RBP11.56□□□□□ -0.56
SSBP3-206ENST00000420121 ELF2Q15723 593 aa11.56□□□□□ -0.56
SSBP3-206ENST00000420121 CNGA2Q16280 664 aa11.56□□□□□ -0.56
SSBP3-206ENST00000420121 USP39Q53GS9 565 aaKnown RBP11.56□□□□□ -0.56
SSBP3-206ENST00000420121 KIAA1211LQ6NV74 962 aa11.56□□□□□ -0.56
SSBP3-206ENST00000420121 RRAGAQ7L523 313 aa11.56□□□□□ -0.56
SSBP3-206ENST00000420121 TADA2BQ86TJ2 420 aa11.56□□□□□ -0.56
SSBP3-206ENST00000420121 IRF2BP1Q8IU81 584 aa11.56□□□□□ -0.56
SSBP3-206ENST00000420121 ARHGAP18Q8N392 663 aa11.56□□□□□ -0.56
SSBP3-206ENST00000420121 PPM1KQ8N3J5 372 aa11.56□□□□□ -0.56
SSBP3-206ENST00000420121 CPXM2Q8N436 756 aa11.56□□□□□ -0.56
SSBP3-206ENST00000420121 RBBP8NLQ8NC74 664 aaPredicted RBP11.56□□□□□ -0.56
SSBP3-206ENST00000420121 BHMTQ93088 406 aa11.56□□□□□ -0.56
SSBP3-206ENST00000420121 XPO6Q96QU8 1125 aaKnown RBP11.56□□□□□ -0.56
SSBP3-206ENST00000420121 GABRG3Q99928 467 aa11.56□□□□□ -0.56
SSBP3-206ENST00000420121 SRRTQ9BXP5 876 aaKnown RBP11.56□□□□□ -0.56
SSBP3-206ENST00000420121 LRRC4Q9HBW1 653 aa11.56□□□□□ -0.56
SSBP3-206ENST00000420121 KIAA1468Q9P260 1216 aa11.56□□□□□ -0.56
SSBP3-206ENST00000420121 HESX1Q9UBX0 185 aa11.56□□□□□ -0.56
SSBP3-206ENST00000420121 SLC27A6Q9Y2P4 619 aa11.56□□□□□ -0.56
SSBP3-206ENST00000420121 PCDHB4Q9Y5E5 795 aa11.56□□□□□ -0.56
SSBP3-206ENST00000420121 PCDH15Q96QU1 1955 aa11.56□□□□□ -0.56
SSBP3-206ENST00000420121 TCRBV21S2A2A0A5A6 115 aa11.55□□□□□ -0.56
SSBP3-206ENST00000420121 SLC12A8A0AV02 714 aa11.55□□□□□ -0.56
SSBP3-206ENST00000420121 FOXD2O60548 495 aaPredicted RBP11.55□□□□□ -0.56
SSBP3-206ENST00000420121 ALDH1A2O94788 518 aa11.55□□□□□ -0.56
SSBP3-206ENST00000420121 RHOBTB1O94844 696 aa11.55□□□□□ -0.56
SSBP3-206ENST00000420121 GNA14O95837 355 aa11.55□□□□□ -0.56
SSBP3-206ENST00000420121 AFPP02771 609 aaKnown RBP11.55□□□□□ -0.56
SSBP3-206ENST00000420121 HOXB2P14652 356 aa11.55□□□□□ -0.56
SSBP3-206ENST00000420121 NTSR1P30989 418 aa11.55□□□□□ -0.56
SSBP3-206ENST00000420121 GBP1P32455 592 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms