RNA–Protein interactions for RNA: ENST00000417088.2

RPS28-201, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-201ENST00000417088 WASH3PC4AMC7 463 aa15.58■□□□□ 0.08
RPS28-201ENST00000417088 GFRA2O00451 464 aa15.58■□□□□ 0.08
RPS28-201ENST00000417088 ZBTB24O43167 697 aaPredicted RBP15.58■□□□□ 0.08
RPS28-201ENST00000417088 SERPINF2P08697 491 aa15.58■□□□□ 0.08
RPS28-201ENST00000417088 RPL13P26373 211 aaKnown RBP15.58■□□□□ 0.08
RPS28-201ENST00000417088 PSEN1P49768 467 aa15.58■□□□□ 0.08
RPS28-201ENST00000417088 SEMA3BQ13214 749 aa15.58■□□□□ 0.08
RPS28-201ENST00000417088 ZCWPW2Q504Y3 356 aa15.58■□□□□ 0.08
RPS28-201ENST00000417088 UNQ6494/PRO21346Q6UXR6 183 aa15.58■□□□□ 0.08
RPS28-201ENST00000417088 PIP4P1Q86T03 277 aa15.58■□□□□ 0.08
RPS28-201ENST00000417088 SLC41A1Q8IVJ1 513 aa15.58■□□□□ 0.08
RPS28-201ENST00000417088 SEMA4DQ92854 862 aa15.58■□□□□ 0.08
RPS28-201ENST00000417088 HEXIM2Q96MH2 286 aaKnown RBP15.58■□□□□ 0.08
RPS28-201ENST00000417088 SLC6A17Q9H1V8 727 aa15.58■□□□□ 0.08
RPS28-201ENST00000417088 CAPN10Q9HC96 672 aa15.58■□□□□ 0.08
RPS28-201ENST00000417088 CD93Q9NPY3 652 aa15.58■□□□□ 0.08
RPS28-201ENST00000417088 CLIC5Q9NZA1 410 aa15.58■□□□□ 0.08
RPS28-201ENST00000417088 CYP8B1Q9UNU6 501 aa15.58■□□□□ 0.08
RPS28-201ENST00000417088 UPK3BL1B0FP48 263 aa15.57■□□□□ 0.08
RPS28-201ENST00000417088 UPK3BL2E5RIL1 263 aa15.57■□□□□ 0.08
RPS28-201ENST00000417088 PENKP01210 267 aaPredicted RBP15.57■□□□□ 0.08
RPS28-201ENST00000417088 RALAP11233 206 aa15.57■□□□□ 0.08
RPS28-201ENST00000417088 GTF2H1P32780 548 aa15.57■□□□□ 0.08
RPS28-201ENST00000417088 KRT85P78386 507 aa15.57■□□□□ 0.08
RPS28-201ENST00000417088 KRT39Q6A163 491 aa15.57■□□□□ 0.08
RPS28-201ENST00000417088 KRBA2Q6ZNG9 492 aa15.57■□□□□ 0.08
RPS28-201ENST00000417088 TADA2BQ86TJ2 420 aa15.57■□□□□ 0.08
RPS28-201ENST00000417088 CCDC150Q8NCX0 1101 aa15.57■□□□□ 0.08
RPS28-201ENST00000417088 MRGPRX1Q96LB2 322 aa15.57■□□□□ 0.08
RPS28-201ENST00000417088 GTPBP2Q9BX10 602 aaKnown RBP15.57■□□□□ 0.08
RPS28-201ENST00000417088 TMEM121BQ9BXQ6 578 aaPredicted RBP15.57■□□□□ 0.08
RPS28-201ENST00000417088 DNAI2Q9GZS0 605 aa15.57■□□□□ 0.08
RPS28-201ENST00000417088 SLC32A1Q9H598 525 aa15.57■□□□□ 0.08
RPS28-201ENST00000417088 ZNF510Q9Y2H8 683 aa15.57■□□□□ 0.08
RPS28-201ENST00000417088 SLC27A6Q9Y2P4 619 aa15.57■□□□□ 0.08
RPS28-201ENST00000417088 HMBSP08397 361 aa15.56■□□□□ 0.08
RPS28-201ENST00000417088 ATXN3P54252 364 aaPredicted RBP15.56■□□□□ 0.08
RPS28-201ENST00000417088 COG7P83436 770 aa15.56■□□□□ 0.08
RPS28-201ENST00000417088 GFPT1Q06210 699 aaPredicted RBP15.56■□□□□ 0.08
RPS28-201ENST00000417088 FYB2Q5VWT5 728 aa15.56■□□□□ 0.08
RPS28-201ENST00000417088 RABEPKQ7Z6M1 372 aa15.56■□□□□ 0.08
RPS28-201ENST00000417088 TRIML1Q8N9V2 468 aa15.56■□□□□ 0.08
RPS28-201ENST00000417088 SLC4A11Q8NBS3 891 aa15.56■□□□□ 0.08
RPS28-201ENST00000417088 EEF2KMTQ96G04 330 aa15.56■□□□□ 0.08
RPS28-201ENST00000417088 ZNF419Q96HQ0 510 aaPredicted RBP15.56■□□□□ 0.08
RPS28-201ENST00000417088 FAXDC2Q96IV6 333 aa15.56■□□□□ 0.08
RPS28-201ENST00000417088 HSPA12BQ96MM6 686 aa15.56■□□□□ 0.08
RPS28-201ENST00000417088 CDK5RAP1Q96SZ6 601 aaKnown RBP15.56■□□□□ 0.08
RPS28-201ENST00000417088 SCNM1Q9BWG6 230 aa15.56■□□□□ 0.08
RPS28-201ENST00000417088 ADAM33Q9BZ11 813 aa15.56■□□□□ 0.08
RPS28-201ENST00000417088 UBXN6Q9BZV1 441 aa15.56■□□□□ 0.08
RPS28-201ENST00000417088 DCLK3Q9C098 648 aa15.56■□□□□ 0.08
RPS28-201ENST00000417088 GOLPH3LQ9H4A5 285 aa15.56■□□□□ 0.08
RPS28-201ENST00000417088 CISHQ9NSE2 258 aa15.56■□□□□ 0.08
RPS28-201ENST00000417088 RASAL2Q9UJF2 1139 aa15.56■□□□□ 0.08
RPS28-201ENST00000417088 STON1Q9Y6Q2 735 aa15.56■□□□□ 0.08
RPS28-201ENST00000417088 CEP192Q8TEP8 1941 aa15.56■□□□□ 0.08
RPS28-201ENST00000417088 SPAARA0A1B0GVQ0 90 aa15.55■□□□□ 0.08
RPS28-201ENST00000417088 A0A1W2PQD8 194 aa15.55■□□□□ 0.08
RPS28-201ENST00000417088 ARHGAP33O14559 1287 aa15.55■□□□□ 0.08
RPS28-201ENST00000417088 CORO1AP31146 461 aaKnown RBP15.55■□□□□ 0.08
RPS28-201ENST00000417088 CHKAP35790 457 aa15.55■□□□□ 0.08
RPS28-201ENST00000417088 RAD23BP54727 409 aa15.55■□□□□ 0.08
RPS28-201ENST00000417088 MFAP3P55082 362 aa15.55■□□□□ 0.08
RPS28-201ENST00000417088 EFEMP1Q12805 493 aa15.55■□□□□ 0.08
RPS28-201ENST00000417088 GEN1Q17RS7 908 aa15.55■□□□□ 0.08
RPS28-201ENST00000417088 EDRF1Q3B7T1 1238 aa15.55■□□□□ 0.08
RPS28-201ENST00000417088 RAB41Q5JT25 222 aa15.55■□□□□ 0.08
RPS28-201ENST00000417088 KIAA1324Q6UXG2 1013 aaKnown RBP15.55■□□□□ 0.08
RPS28-201ENST00000417088 PIGZQ86VD9 579 aa15.55■□□□□ 0.08
RPS28-201ENST00000417088 HDDC3Q8N4P3 179 aa15.55■□□□□ 0.08
RPS28-201ENST00000417088 FBXL13Q8NEE6 735 aa15.55■□□□□ 0.08
RPS28-201ENST00000417088 OR2I1PQ8NGU4 316 aa15.55■□□□□ 0.08
RPS28-201ENST00000417088 TMEM176AQ96HP8 235 aa15.55■□□□□ 0.08
RPS28-201ENST00000417088 ARID3AQ99856 593 aa15.55■□□□□ 0.08
RPS28-201ENST00000417088 RAB20Q9NX57 234 aa15.55■□□□□ 0.08
RPS28-201ENST00000417088 AGO1Q9UL18 857 aaKnown RBP15.55■□□□□ 0.08
RPS28-201ENST00000417088 A0A1W2PQ27 194 aa15.54■□□□□ 0.08
RPS28-201ENST00000417088 A0A1W2PQ64 194 aa15.54■□□□□ 0.08
RPS28-201ENST00000417088 OPHN1O60890 802 aa15.54■□□□□ 0.08
RPS28-201ENST00000417088 NDUFS2O75306 463 aa15.54■□□□□ 0.08
RPS28-201ENST00000417088 MXI1P50539 228 aa15.54■□□□□ 0.08
RPS28-201ENST00000417088 YWHAGP61981 247 aaKnown RBP eCLIP15.54■□□□□ 0.08
RPS28-201ENST00000417088 ENPP2Q13822 863 aa15.54■□□□□ 0.08
RPS28-201ENST00000417088 FUT11Q495W5 492 aa15.54■□□□□ 0.08
RPS28-201ENST00000417088 ARHGAP17Q68EM7 881 aa15.54■□□□□ 0.08
RPS28-201ENST00000417088 METTL3Q86U44 580 aaKnown RBP15.54■□□□□ 0.08
RPS28-201ENST00000417088 SMYD4Q8IYR2 804 aaPredicted RBP15.54■□□□□ 0.08
RPS28-201ENST00000417088 ARHGAP18Q8N392 663 aa15.54■□□□□ 0.08
RPS28-201ENST00000417088 TTC39CQ8N584 583 aa15.54■□□□□ 0.08
RPS28-201ENST00000417088 MINDY1Q8N5J2 469 aa15.54■□□□□ 0.08
RPS28-201ENST00000417088 KDF1Q8NAX2 398 aaPredicted RBP15.54■□□□□ 0.08
RPS28-201ENST00000417088 ANKRD52Q8NB46 1076 aa15.54■□□□□ 0.08
RPS28-201ENST00000417088 TATDN2Q93075 761 aa15.54■□□□□ 0.08
RPS28-201ENST00000417088 PIWIL1Q96J94 861 aaKnown RBP15.54■□□□□ 0.08
RPS28-201ENST00000417088 THAP10Q9P2Z0 257 aaPredicted RBP15.54■□□□□ 0.08
RPS28-201ENST00000417088 ZMIZ1Q9ULJ6 1067 aa15.54■□□□□ 0.08
RPS28-201ENST00000417088 CLEC4EQ9ULY5 219 aa15.54■□□□□ 0.08
RPS28-201ENST00000417088 PCDH15Q96QU1 1955 aa15.54■□□□□ 0.08
RPS28-201ENST00000417088 ADAMTS9Q9P2N4 1935 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms