RNA–Protein interactions for RNA: ENST00000409604.1

SNX13-202, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 4,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-202ENST00000409604 CATSPERBQ9H7T0 1116 aa11.8□□□□□ -0.52
SNX13-202ENST00000409604 TMEM161AQ9NX61 479 aa11.8□□□□□ -0.52
SNX13-202ENST00000409604 SHOC2Q9UQ13 582 aa11.8□□□□□ -0.52
SNX13-202ENST00000409604 ADAMTSL1Q8N6G6 1762 aa11.8□□□□□ -0.52
SNX13-202ENST00000409604 GVINP1Q7Z2Y8 2422 aa11.8□□□□□ -0.52
SNX13-202ENST00000409604 TCRBV7S2A1N4TA0A589 114 aa11.8□□□□□ -0.52
SNX13-202ENST00000409604 RASSF10A6NK89 507 aa11.8□□□□□ -0.52
SNX13-202ENST00000409604 CD48P09326 243 aa11.8□□□□□ -0.52
SNX13-202ENST00000409604 NRLP54845 237 aa11.8□□□□□ -0.52
SNX13-202ENST00000409604 MAGOHP61326 146 aaKnown RBP11.8□□□□□ -0.52
SNX13-202ENST00000409604 HIC1Q14526 733 aa11.8□□□□□ -0.52
SNX13-202ENST00000409604 UNC93AQ86WB7 457 aa11.8□□□□□ -0.52
SNX13-202ENST00000409604 NUP93Q8N1F7 819 aa11.8□□□□□ -0.52
SNX13-202ENST00000409604 C12orf76Q8N812 135 aaPredicted RBP11.8□□□□□ -0.52
SNX13-202ENST00000409604 FBXO22Q8NEZ5 403 aa11.8□□□□□ -0.52
SNX13-202ENST00000409604 TFB1MQ8WVM0 346 aaKnown RBP11.8□□□□□ -0.52
SNX13-202ENST00000409604 RUNDC3BQ96NL0 473 aa11.8□□□□□ -0.52
SNX13-202ENST00000409604 DYRK4Q9NR20 520 aa11.8□□□□□ -0.52
SNX13-202ENST00000409604 NDFIP2Q9NV92 336 aa11.8□□□□□ -0.52
SNX13-202ENST00000409604 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.8□□□□□ -0.52
SNX13-202ENST00000409604 FARP1Q9Y4F1 1045 aaPredicted RBP11.8□□□□□ -0.52
SNX13-202ENST00000409604 COL2A1P02458 1487 aaPredicted RBP11.8□□□□□ -0.52
SNX13-202ENST00000409604 DNM1LO00429 736 aa11.79□□□□□ -0.52
SNX13-202ENST00000409604 SH3BP5O60239 455 aa11.79□□□□□ -0.52
SNX13-202ENST00000409604 GLUD1P00367 558 aa11.79□□□□□ -0.52
SNX13-202ENST00000409604 ADH1AP07327 375 aa11.79□□□□□ -0.52
SNX13-202ENST00000409604 MX2P20592 715 aa11.79□□□□□ -0.52
SNX13-202ENST00000409604 RBL1P28749 1068 aa11.79□□□□□ -0.52
SNX13-202ENST00000409604 PRKCIP41743 596 aa11.79□□□□□ -0.52
SNX13-202ENST00000409604 POU6F1Q14863 301 aa11.79□□□□□ -0.52
SNX13-202ENST00000409604 PDK1Q15118 436 aa11.79□□□□□ -0.52
SNX13-202ENST00000409604 GET4Q7L5D6 327 aaPredicted RBP11.79□□□□□ -0.52
SNX13-202ENST00000409604 ZNF669Q96BR6 464 aaPredicted RBP11.79□□□□□ -0.52
SNX13-202ENST00000409604 SGF29Q96ES7 293 aa11.79□□□□□ -0.52
SNX13-202ENST00000409604 DUSP16Q9BY84 665 aa11.79□□□□□ -0.52
SNX13-202ENST00000409604 GPR62Q9BZJ7 368 aa11.79□□□□□ -0.52
SNX13-202ENST00000409604 ATP13A1Q9HD20 1204 aa11.79□□□□□ -0.52
SNX13-202ENST00000409604 PFDN4Q9NQP4 134 aa11.79□□□□□ -0.52
SNX13-202ENST00000409604 ZC3H7BQ9UGR2 993 aaKnown RBP11.79□□□□□ -0.52
SNX13-202ENST00000409604 DOCK3Q8IZD9 2030 aa11.79□□□□□ -0.52
SNX13-202ENST00000409604 GPR32O75388 356 aa11.79□□□□□ -0.52
SNX13-202ENST00000409604 GNRH1P01148 92 aa11.79□□□□□ -0.52
SNX13-202ENST00000409604 KITP10721 976 aa11.79□□□□□ -0.52
SNX13-202ENST00000409604 ASPAP45381 313 aa11.79□□□□□ -0.52
SNX13-202ENST00000409604 PPP2R2DQ66LE6 453 aa11.79□□□□□ -0.52
SNX13-202ENST00000409604 SLC39A5Q6ZMH5 540 aa11.79□□□□□ -0.52
SNX13-202ENST00000409604 C3orf62Q6ZUJ4 267 aa11.79□□□□□ -0.52
SNX13-202ENST00000409604 OSTM1Q86WC4 334 aa11.79□□□□□ -0.52
SNX13-202ENST00000409604 PDCD7Q8N8D1 485 aaKnown RBP11.79□□□□□ -0.52
SNX13-202ENST00000409604 ARL14EPQ8N8R7 260 aaPredicted RBP11.79□□□□□ -0.52
SNX13-202ENST00000409604 FLCNQ8NFG4 579 aa11.79□□□□□ -0.52
SNX13-202ENST00000409604 CFAP61Q8NHU2 1237 aa11.79□□□□□ -0.52
SNX13-202ENST00000409604 USP6NLQ92738 828 aa11.79□□□□□ -0.52
SNX13-202ENST00000409604 KLHL5Q96PQ7 755 aa11.79□□□□□ -0.52
SNX13-202ENST00000409604 NUDCD1Q96RS6 583 aa11.79□□□□□ -0.52
SNX13-202ENST00000409604 CYP2S1Q96SQ9 504 aa11.79□□□□□ -0.52
SNX13-202ENST00000409604 SMG9Q9H0W8 520 aaKnown RBP11.79□□□□□ -0.52
SNX13-202ENST00000409604 ADAMTS10Q9H324 1103 aa11.79□□□□□ -0.52
SNX13-202ENST00000409604 ZFATQ9P243 1243 aa11.79□□□□□ -0.52
SNX13-202ENST00000409604 IPO11Q9UI26 975 aaKnown RBP11.79□□□□□ -0.52
SNX13-202ENST00000409604 SBF2Q86WG5 1849 aa11.79□□□□□ -0.52
SNX13-202ENST00000409604 MGEA5O60502 916 aa11.79□□□□□ -0.52
SNX13-202ENST00000409604 TCF4P15884 667 aa11.79□□□□□ -0.52
SNX13-202ENST00000409604 CYP4F8P98187 520 aa11.79□□□□□ -0.52
SNX13-202ENST00000409604 RAD51Q06609 339 aa11.79□□□□□ -0.52
SNX13-202ENST00000409604 TMEM139Q8IV31 216 aa11.79□□□□□ -0.52
SNX13-202ENST00000409604 ERP44Q9BS26 406 aa11.79□□□□□ -0.52
SNX13-202ENST00000409604 TRIM62Q9BVG3 475 aa11.79□□□□□ -0.52
SNX13-202ENST00000409604 ASAH2Q9NR71 780 aa11.79□□□□□ -0.52
SNX13-202ENST00000409604 MYH8P13535 1937 aa11.79□□□□□ -0.52
SNX13-202ENST00000409604 COL5A3P25940 1745 aaPredicted RBP11.79□□□□□ -0.52
SNX13-202ENST00000409604 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.79□□□□□ -0.52
SNX13-202ENST00000409604 ZFXP17010 805 aaPredicted RBP11.79□□□□□ -0.52
SNX13-202ENST00000409604 CHRNB2P17787 502 aa11.79□□□□□ -0.52
SNX13-202ENST00000409604 MARSP56192 900 aaKnown RBP11.79□□□□□ -0.52
SNX13-202ENST00000409604 PPIGQ13427 754 aaKnown RBP eCLIP11.79□□□□□ -0.52
SNX13-202ENST00000409604 HECTD3Q5T447 861 aa11.79□□□□□ -0.52
SNX13-202ENST00000409604 HFE2Q6ZVN8 426 aa11.79□□□□□ -0.52
SNX13-202ENST00000409604 CCNYL1Q8N7R7 359 aa11.79□□□□□ -0.52
SNX13-202ENST00000409604 NRDE2Q9H7Z3 1164 aa11.79□□□□□ -0.52
SNX13-202ENST00000409604 DDHD2O94830 711 aa11.78□□□□□ -0.52
SNX13-202ENST00000409604 F9P00740 461 aa11.78□□□□□ -0.52
SNX13-202ENST00000409604 MMP8P22894 467 aa11.78□□□□□ -0.52
SNX13-202ENST00000409604 SYPL2Q5VXT5 272 aa11.78□□□□□ -0.52
SNX13-202ENST00000409604 CEP128Q6ZU80 1094 aa11.78□□□□□ -0.52
SNX13-202ENST00000409604 SMG8Q8ND04 991 aaKnown RBP11.78□□□□□ -0.52
SNX13-202ENST00000409604 GRIN3AQ8TCU5 1115 aa11.78□□□□□ -0.52
SNX13-202ENST00000409604 HDAC11Q96DB2 347 aa11.78□□□□□ -0.52
SNX13-202ENST00000409604 MYOCQ99972 504 aa11.78□□□□□ -0.52
SNX13-202ENST00000409604 GPR63Q9BZJ6 419 aa11.78□□□□□ -0.52
SNX13-202ENST00000409604 DONSONQ9NYP3 566 aa11.78□□□□□ -0.52
SNX13-202ENST00000409604 HACD3Q9P035 362 aa11.78□□□□□ -0.52
SNX13-202ENST00000409604 INTUQ9ULD6 942 aa11.78□□□□□ -0.52
SNX13-202ENST00000409604 Q9Y3F1 56 aa11.78□□□□□ -0.52
SNX13-202ENST00000409604 TAF1LQ8IZX4 1826 aa11.78□□□□□ -0.52
SNX13-202ENST00000409604 A0A1W2PRU2 124 aa11.78□□□□□ -0.52
SNX13-202ENST00000409604 TBC1D3BA6NDS4 549 aa11.78□□□□□ -0.52
SNX13-202ENST00000409604 DEFB103AP81534 67 aa11.78□□□□□ -0.52
SNX13-202ENST00000409604 MRPS5P82675 430 aaKnown RBP11.78□□□□□ -0.52
SNX13-202ENST00000409604 SEMG2Q02383 582 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms