RNA–Protein interactions for RNA: ENST00000399438.7

TRAPPC13-202, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TRAPPC13, Length 3,221 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-202ENST00000399438 GAS7O60861 476 aa6.49□□□□□ -1.37
TRAPPC13-202ENST00000399438 DNAJA2O60884 412 aa6.49□□□□□ -1.37
TRAPPC13-202ENST00000399438 ALDH1A2O94788 518 aa6.49□□□□□ -1.37
TRAPPC13-202ENST00000399438 NDUFA10O95299 355 aa6.49□□□□□ -1.37
TRAPPC13-202ENST00000399438 MOCS3O95396 460 aa6.49□□□□□ -1.37
TRAPPC13-202ENST00000399438 TUBB4AP04350 444 aa6.49□□□□□ -1.37
TRAPPC13-202ENST00000399438 ACTN1P12814 892 aa6.49□□□□□ -1.37
TRAPPC13-202ENST00000399438 YBX3P16989 372 aaKnown RBP eCLIP6.49□□□□□ -1.37
TRAPPC13-202ENST00000399438 SHMT1P34896 483 aa6.49□□□□□ -1.37
TRAPPC13-202ENST00000399438 ACAA2P42765 397 aaKnown RBP6.49□□□□□ -1.37
TRAPPC13-202ENST00000399438 SLC1A4P43007 532 aa6.49□□□□□ -1.37
TRAPPC13-202ENST00000399438 HADHBP55084 474 aaKnown RBP6.49□□□□□ -1.37
TRAPPC13-202ENST00000399438 VAMP2P63027 116 aa6.49□□□□□ -1.37
TRAPPC13-202ENST00000399438 GSTO1P78417 241 aa6.49□□□□□ -1.37
TRAPPC13-202ENST00000399438 AOC3Q16853 763 aa6.49□□□□□ -1.37
TRAPPC13-202ENST00000399438 TDRD12Q587J7 1177 aaKnown RBP6.49□□□□□ -1.37
TRAPPC13-202ENST00000399438 WDR93Q6P2C0 686 aa6.49□□□□□ -1.37
TRAPPC13-202ENST00000399438 BNIPLQ7Z465 357 aa6.49□□□□□ -1.37
TRAPPC13-202ENST00000399438 RIOX2Q8IUF8 465 aa6.49□□□□□ -1.37
TRAPPC13-202ENST00000399438 RBM12BQ8IXT5 1001 aaKnown RBP6.49□□□□□ -1.37
TRAPPC13-202ENST00000399438 TRIM43Q96BQ3 446 aaPredicted RBP6.49□□□□□ -1.37
TRAPPC13-202ENST00000399438 ACAP3Q96P50 834 aa6.49□□□□□ -1.37
TRAPPC13-202ENST00000399438 SPXQ9BT56 116 aa6.49□□□□□ -1.37
TRAPPC13-202ENST00000399438 GCOM2Q9BZD3 368 aaPredicted RBP6.49□□□□□ -1.37
TRAPPC13-202ENST00000399438 SEPT11Q9NVA2 429 aaKnown RBP6.49□□□□□ -1.37
TRAPPC13-202ENST00000399438 TRAF6Q9Y4K3 522 aa6.49□□□□□ -1.37
TRAPPC13-202ENST00000399438 MYH8P13535 1937 aa6.49□□□□□ -1.37
TRAPPC13-202ENST00000399438 A0A1W2PPC4 97 aa6.49□□□□□ -1.37
TRAPPC13-202ENST00000399438 C16orf96A6NNT2 1141 aa6.49□□□□□ -1.37
TRAPPC13-202ENST00000399438 RSPH10B2B2RC85 870 aa6.49□□□□□ -1.37
TRAPPC13-202ENST00000399438 H0YIN7 160 aa6.49□□□□□ -1.37
TRAPPC13-202ENST00000399438 PDE2AO00408 941 aaPredicted RBP6.49□□□□□ -1.37
TRAPPC13-202ENST00000399438 ZNF263O14978 683 aa6.49□□□□□ -1.37
TRAPPC13-202ENST00000399438 NOL3O60936 208 aaKnown RBP6.49□□□□□ -1.37
TRAPPC13-202ENST00000399438 RAD17O75943 681 aa6.49□□□□□ -1.37
TRAPPC13-202ENST00000399438 RSPH10BP0C881 870 aa6.49□□□□□ -1.37
TRAPPC13-202ENST00000399438 ACADMP11310 421 aa6.49□□□□□ -1.37
TRAPPC13-202ENST00000399438 JAK1P23458 1154 aa6.49□□□□□ -1.37
TRAPPC13-202ENST00000399438 GPC1P35052 558 aa6.49□□□□□ -1.37
TRAPPC13-202ENST00000399438 THPOP40225 353 aa6.49□□□□□ -1.37
TRAPPC13-202ENST00000399438 GFPT1Q06210 699 aaPredicted RBP6.49□□□□□ -1.37
TRAPPC13-202ENST00000399438 ZNF792Q3KQV3 632 aa6.49□□□□□ -1.37
TRAPPC13-202ENST00000399438 USP39Q53GS9 565 aaKnown RBP6.49□□□□□ -1.37
TRAPPC13-202ENST00000399438 CYP4A22Q5TCH4 519 aa6.49□□□□□ -1.37
TRAPPC13-202ENST00000399438 MCTP2Q6DN12 878 aa6.49□□□□□ -1.37
TRAPPC13-202ENST00000399438 CAND1Q86VP6 1230 aaKnown RBP6.49□□□□□ -1.37
TRAPPC13-202ENST00000399438 CNGA4Q8IV77 575 aa6.49□□□□□ -1.37
TRAPPC13-202ENST00000399438 MFSD2AQ8NA29 543 aa6.49□□□□□ -1.37
TRAPPC13-202ENST00000399438 P2RX5Q93086 422 aa6.49□□□□□ -1.37
TRAPPC13-202ENST00000399438 PPP1R14AQ96A00 147 aa6.49□□□□□ -1.37
TRAPPC13-202ENST00000399438 STMN4Q9H169 189 aaPredicted RBP6.49□□□□□ -1.37
TRAPPC13-202ENST00000399438 MMADHCQ9H3L0 296 aaPredicted RBP6.49□□□□□ -1.37
TRAPPC13-202ENST00000399438 ANKZF1Q9H8Y5 726 aa6.49□□□□□ -1.37
TRAPPC13-202ENST00000399438 ERVMER34-1Q9H9K5 563 aa6.49□□□□□ -1.37
TRAPPC13-202ENST00000399438 NRIP3Q9NQ35 241 aa6.49□□□□□ -1.37
TRAPPC13-202ENST00000399438 DDX25Q9UHL0 483 aaKnown RBP6.49□□□□□ -1.37
TRAPPC13-202ENST00000399438 PCDHA1Q9Y5I3 950 aa6.49□□□□□ -1.37
TRAPPC13-202ENST00000399438 CAPN6Q9Y6Q1 641 aa6.49□□□□□ -1.37
TRAPPC13-202ENST00000399438 NID2Q14112 1375 aa6.49□□□□□ -1.37
TRAPPC13-202ENST00000399438 L7N2F9 121 aa6.48□□□□□ -1.37
TRAPPC13-202ENST00000399438 APOL1O14791 398 aa6.48□□□□□ -1.37
TRAPPC13-202ENST00000399438 CA12O43570 354 aa6.48□□□□□ -1.37
TRAPPC13-202ENST00000399438 RARGP13631 454 aa6.48□□□□□ -1.37
TRAPPC13-202ENST00000399438 KCNA3P22001 575 aa6.48□□□□□ -1.37
TRAPPC13-202ENST00000399438 CDH3P22223 829 aa6.48□□□□□ -1.37
TRAPPC13-202ENST00000399438 RRP1BQ14684 758 aaKnown RBP6.48□□□□□ -1.37
TRAPPC13-202ENST00000399438 QRICH1Q2TAL8 776 aa6.48□□□□□ -1.37
TRAPPC13-202ENST00000399438 PGS1Q32NB8 556 aa6.48□□□□□ -1.37
TRAPPC13-202ENST00000399438 C2orf76Q3KRA6 126 aa6.48□□□□□ -1.37
TRAPPC13-202ENST00000399438 OLFML2BQ68BL8 750 aa6.48□□□□□ -1.37
TRAPPC13-202ENST00000399438 OVOS1Q6IE37 1185 aa6.48□□□□□ -1.37
TRAPPC13-202ENST00000399438 CLEC2AQ6UVW9 174 aa6.48□□□□□ -1.37
TRAPPC13-202ENST00000399438 SPATA24Q86W54 205 aa6.48□□□□□ -1.37
TRAPPC13-202ENST00000399438 KDF1Q8NAX2 398 aaPredicted RBP6.48□□□□□ -1.37
TRAPPC13-202ENST00000399438 ACMSDQ8TDX5 336 aa6.48□□□□□ -1.37
TRAPPC13-202ENST00000399438 ATG4CQ96DT6 458 aa6.48□□□□□ -1.37
TRAPPC13-202ENST00000399438 CALML4Q96GE6 196 aa6.48□□□□□ -1.37
TRAPPC13-202ENST00000399438 MS4A14Q96JA4 679 aa6.48□□□□□ -1.37
TRAPPC13-202ENST00000399438 CMTM3Q96MX0 182 aa6.48□□□□□ -1.37
TRAPPC13-202ENST00000399438 PANX2Q96RD6 677 aa6.48□□□□□ -1.37
TRAPPC13-202ENST00000399438 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.48□□□□□ -1.37
TRAPPC13-202ENST00000399438 ZCCHC2Q9C0B9 1178 aaKnown RBP6.48□□□□□ -1.37
TRAPPC13-202ENST00000399438 ZMYND12Q9H0C1 365 aa6.48□□□□□ -1.37
TRAPPC13-202ENST00000399438 AP5M1Q9H0R1 490 aa6.48□□□□□ -1.37
TRAPPC13-202ENST00000399438 PSTPIP2Q9H939 334 aa6.48□□□□□ -1.37
TRAPPC13-202ENST00000399438 COPS7BQ9H9Q2 264 aaPredicted RBP6.48□□□□□ -1.37
TRAPPC13-202ENST00000399438 SNX15Q9NRS6 342 aa6.48□□□□□ -1.37
TRAPPC13-202ENST00000399438 RGL1Q9NZL6 768 aa6.48□□□□□ -1.37
TRAPPC13-202ENST00000399438 LIMA1Q9UHB6 759 aaKnown RBP6.48□□□□□ -1.37
TRAPPC13-202ENST00000399438 CPSF3Q9UKF6 684 aaKnown RBP6.48□□□□□ -1.37
TRAPPC13-202ENST00000399438 PCDHA9Q9Y5H5 950 aa6.48□□□□□ -1.37
TRAPPC13-202ENST00000399438 AQP12BA6NM10 295 aa6.48□□□□□ -1.37
TRAPPC13-202ENST00000399438 CLIC2O15247 247 aa6.48□□□□□ -1.37
TRAPPC13-202ENST00000399438 DXOO77932 396 aaKnown RBP6.48□□□□□ -1.37
TRAPPC13-202ENST00000399438 POP4O95707 220 aaKnown RBP6.48□□□□□ -1.37
TRAPPC13-202ENST00000399438 BMP15O95972 392 aa6.48□□□□□ -1.37
TRAPPC13-202ENST00000399438 GH2P01242 217 aa6.48□□□□□ -1.37
TRAPPC13-202ENST00000399438 S100A6P06703 90 aa6.48□□□□□ -1.37
TRAPPC13-202ENST00000399438 GJB1P08034 283 aa6.48□□□□□ -1.37
TRAPPC13-202ENST00000399438 POLR2MP0CAP2 368 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms