RNA–Protein interactions for RNA: ENST00000397709.1

MAP1LC3A-203, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MAP1LC3A, Length 698 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-203ENST00000397709 ENDOD1O94919 500 aa20.3■□□□□ 0.84
MAP1LC3A-203ENST00000397709 HDCP19113 662 aa20.3■□□□□ 0.84
MAP1LC3A-203ENST00000397709 SLC7A9P82251 487 aa20.3■□□□□ 0.84
MAP1LC3A-203ENST00000397709 NNTQ13423 1086 aa20.3■□□□□ 0.84
MAP1LC3A-203ENST00000397709 CBX2Q14781 532 aaPredicted RBP20.3■□□□□ 0.84
MAP1LC3A-203ENST00000397709 LEXMQ3ZCV2 418 aa20.3■□□□□ 0.84
MAP1LC3A-203ENST00000397709 ARHGAP29Q52LW3 1261 aa20.3■□□□□ 0.84
MAP1LC3A-203ENST00000397709 CMTM8Q8IZV2 173 aa20.3■□□□□ 0.84
MAP1LC3A-203ENST00000397709 RNF10Q8N5U6 811 aaKnown RBP20.3■□□□□ 0.84
MAP1LC3A-203ENST00000397709 TPCN2Q8NHX9 752 aa20.3■□□□□ 0.84
MAP1LC3A-203ENST00000397709 ADAM32Q8TC27 787 aa20.3■□□□□ 0.84
MAP1LC3A-203ENST00000397709 KIAA1524Q8TCG1 905 aa20.3■□□□□ 0.84
MAP1LC3A-203ENST00000397709 FGF13Q92913 245 aa20.3■□□□□ 0.84
MAP1LC3A-203ENST00000397709 ZSWIM3Q96MP5 696 aa20.3■□□□□ 0.84
MAP1LC3A-203ENST00000397709 SERPINB11Q96P15 392 aa20.3■□□□□ 0.84
MAP1LC3A-203ENST00000397709 CYP2S1Q96SQ9 504 aa20.3■□□□□ 0.84
MAP1LC3A-203ENST00000397709 NACA2Q9H009 215 aa20.3■□□□□ 0.84
MAP1LC3A-203ENST00000397709 FAM204AQ9H8W3 233 aa20.3■□□□□ 0.84
MAP1LC3A-203ENST00000397709 LZTFL1Q9NQ48 299 aa20.3■□□□□ 0.84
MAP1LC3A-203ENST00000397709 NUP210Q8TEM1 1887 aaPredicted RBP20.3■□□□□ 0.84
MAP1LC3A-203ENST00000397709 HELZP42694 1942 aaKnown RBP20.29■□□□□ 0.84
MAP1LC3A-203ENST00000397709 MACROD2A1Z1Q3 448 aa20.29■□□□□ 0.84
MAP1LC3A-203ENST00000397709 USP27XA6NNY8 438 aa20.29■□□□□ 0.84
MAP1LC3A-203ENST00000397709 M0QYT0 321 aa20.29■□□□□ 0.84
MAP1LC3A-203ENST00000397709 IRAK2O43187 625 aa20.29■□□□□ 0.84
MAP1LC3A-203ENST00000397709 PROSCO94903 275 aa20.29■□□□□ 0.84
MAP1LC3A-203ENST00000397709 CKMP06732 381 aa20.29■□□□□ 0.84
MAP1LC3A-203ENST00000397709 MBL2P11226 248 aaPredicted RBP20.29■□□□□ 0.84
MAP1LC3A-203ENST00000397709 WEE1P30291 646 aa20.29■□□□□ 0.84
MAP1LC3A-203ENST00000397709 DEKP35659 375 aaKnown RBP20.29■□□□□ 0.84
MAP1LC3A-203ENST00000397709 ATP11AP98196 1134 aa20.29■□□□□ 0.84
MAP1LC3A-203ENST00000397709 PIGHQ14442 188 aaPredicted RBP20.29■□□□□ 0.84
MAP1LC3A-203ENST00000397709 SH3PXD2AQ5TCZ1 1133 aa20.29■□□□□ 0.84
MAP1LC3A-203ENST00000397709 STRADAQ7RTN6 431 aa20.29■□□□□ 0.84
MAP1LC3A-203ENST00000397709 FAM172AQ8WUF8 416 aa20.29■□□□□ 0.84
MAP1LC3A-203ENST00000397709 ZFRQ96KR1 1074 aaKnown RBP20.29■□□□□ 0.84
MAP1LC3A-203ENST00000397709 SLITRK6Q9H5Y7 841 aa20.29■□□□□ 0.84
MAP1LC3A-203ENST00000397709 TRMT1Q9NXH9 659 aaKnown RBP20.29■□□□□ 0.84
MAP1LC3A-203ENST00000397709 GDE1Q9NZC3 331 aa20.29■□□□□ 0.84
MAP1LC3A-203ENST00000397709 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.29■□□□□ 0.84
MAP1LC3A-203ENST00000397709 CDH7Q9ULB5 785 aa20.29■□□□□ 0.84
MAP1LC3A-203ENST00000397709 GUCA1BQ9UMX6 200 aa20.29■□□□□ 0.84
MAP1LC3A-203ENST00000397709 ZKSCAN5Q9Y2L8 839 aa20.29■□□□□ 0.84
MAP1LC3A-203ENST00000397709 PAXBP1Q9Y5B6 917 aa20.29■□□□□ 0.84
MAP1LC3A-203ENST00000397709 DOCK8Q8NF50 2099 aa20.28■□□□□ 0.84
MAP1LC3A-203ENST00000397709 MSI1O43347 362 aaKnown RBP20.28■□□□□ 0.84
MAP1LC3A-203ENST00000397709 BUB1BO60566 1050 aaPredicted RBP20.28■□□□□ 0.84
MAP1LC3A-203ENST00000397709 MOCS3O95396 460 aa20.28■□□□□ 0.84
MAP1LC3A-203ENST00000397709 GBP1P32455 592 aa20.28■□□□□ 0.84
MAP1LC3A-203ENST00000397709 MAN1A1P33908 653 aa20.28■□□□□ 0.84
MAP1LC3A-203ENST00000397709 RDXP35241 583 aaKnown RBP20.28■□□□□ 0.84
MAP1LC3A-203ENST00000397709 HDAC4P56524 1084 aa20.28■□□□□ 0.84
MAP1LC3A-203ENST00000397709 ACAP1Q15027 740 aa20.28■□□□□ 0.84
MAP1LC3A-203ENST00000397709 TRIP4Q15650 581 aaPredicted RBP20.28■□□□□ 0.84
MAP1LC3A-203ENST00000397709 IFI16Q16666 785 aaKnown RBP20.28■□□□□ 0.84
MAP1LC3A-203ENST00000397709 CDO1Q16878 200 aa20.28■□□□□ 0.84
MAP1LC3A-203ENST00000397709 RAB6CQ53S08 254 aa20.28■□□□□ 0.84
MAP1LC3A-203ENST00000397709 C11orf63Q6NUN7 778 aa20.28■□□□□ 0.84
MAP1LC3A-203ENST00000397709 MIB1Q86YT6 1006 aa20.28■□□□□ 0.84
MAP1LC3A-203ENST00000397709 MYADMQ96S97 322 aa20.28■□□□□ 0.84
MAP1LC3A-203ENST00000397709 KLF16Q9BXK1 252 aaPredicted RBP20.28■□□□□ 0.84
MAP1LC3A-203ENST00000397709 RAB6CQ9H0N0 254 aa20.28■□□□□ 0.84
MAP1LC3A-203ENST00000397709 TMEM51Q9NW97 253 aa20.28■□□□□ 0.84
MAP1LC3A-203ENST00000397709 DDIT4Q9NX09 232 aa20.28■□□□□ 0.84
MAP1LC3A-203ENST00000397709 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.28■□□□□ 0.84
MAP1LC3A-203ENST00000397709 ARHGAP26Q9UNA1 814 aa20.28■□□□□ 0.84
MAP1LC3A-203ENST00000397709 HBS1LQ9Y450 684 aaKnown RBP20.28■□□□□ 0.84
MAP1LC3A-203ENST00000397709 CPQQ9Y646 472 aa20.28■□□□□ 0.84
MAP1LC3A-203ENST00000397709 XIRP2A4UGR9 3374 aa20.28■□□□□ 0.84
MAP1LC3A-203ENST00000397709 SLC12A8A0AV02 714 aa20.27■□□□□ 0.84
MAP1LC3A-203ENST00000397709 IGLV3-27P01718 113 aa20.27■□□□□ 0.84
MAP1LC3A-203ENST00000397709 DESP17661 470 aa20.27■□□□□ 0.84
MAP1LC3A-203ENST00000397709 AVPR1AP37288 418 aa20.27■□□□□ 0.84
MAP1LC3A-203ENST00000397709 KPNA1P52294 538 aaPredicted RBP20.27■□□□□ 0.84
MAP1LC3A-203ENST00000397709 ATXN1P54253 815 aaKnown RBP20.27■□□□□ 0.84
MAP1LC3A-203ENST00000397709 NAP1L1P55209 391 aaKnown RBP20.27■□□□□ 0.84
MAP1LC3A-203ENST00000397709 DEUP1Q05D60 604 aa20.27■□□□□ 0.84
MAP1LC3A-203ENST00000397709 NME3Q13232 169 aa20.27■□□□□ 0.84
MAP1LC3A-203ENST00000397709 MESDQ14696 234 aa20.27■□□□□ 0.84
MAP1LC3A-203ENST00000397709 ARFGAP1Q8N6T3 406 aa20.27■□□□□ 0.84
MAP1LC3A-203ENST00000397709 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.27■□□□□ 0.84
MAP1LC3A-203ENST00000397709 SLC39A13Q96H72 371 aa20.27■□□□□ 0.84
MAP1LC3A-203ENST00000397709 PIGVQ9NUD9 493 aa20.27■□□□□ 0.84
MAP1LC3A-203ENST00000397709 TLR6Q9Y2C9 796 aa20.27■□□□□ 0.84
MAP1LC3A-203ENST00000397709 SYNJ2BP-COX16A0A087WUM0 186 aa20.26■□□□□ 0.83
MAP1LC3A-203ENST00000397709 GRID2IPA4D2P6 1211 aa20.26■□□□□ 0.83
MAP1LC3A-203ENST00000397709 GOLGA6L9A6NEM1 432 aa20.26■□□□□ 0.83
MAP1LC3A-203ENST00000397709 TMEM110-MUSTN1A8MSY1 372 aa20.26■□□□□ 0.83
MAP1LC3A-203ENST00000397709 LRCH4O75427 683 aa20.26■□□□□ 0.83
MAP1LC3A-203ENST00000397709 PRAMEF12O95522 483 aa20.26■□□□□ 0.83
MAP1LC3A-203ENST00000397709 F9P00740 461 aa20.26■□□□□ 0.83
MAP1LC3A-203ENST00000397709 CXCR3P49682 368 aa20.26■□□□□ 0.83
MAP1LC3A-203ENST00000397709 TBX4P57082 545 aa20.26■□□□□ 0.83
MAP1LC3A-203ENST00000397709 COG7P83436 770 aa20.26■□□□□ 0.83
MAP1LC3A-203ENST00000397709 ZXDBP98169 803 aa20.26■□□□□ 0.83
MAP1LC3A-203ENST00000397709 CPNE8Q86YQ8 564 aa20.26■□□□□ 0.83
MAP1LC3A-203ENST00000397709 LRRC57Q8N9N7 239 aa20.26■□□□□ 0.83
MAP1LC3A-203ENST00000397709 ZSCAN18Q8TBC5 510 aaPredicted RBP20.26■□□□□ 0.83
MAP1LC3A-203ENST00000397709 USP13Q92995 863 aaPredicted RBP20.26■□□□□ 0.83
MAP1LC3A-203ENST00000397709 PLD4Q96BZ4 506 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms