RNA–Protein interactions for RNA: ENST00000379817.6

APTX-204, Transcript of aprataxin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene APTX, Length 2,106 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-204ENST00000379817 SMAPO00193 183 aa10.81□□□□□ -0.68
APTX-204ENST00000379817 TTC4O95801 387 aa10.81□□□□□ -0.68
APTX-204ENST00000379817 SHBGP04278 402 aa10.81□□□□□ -0.68
APTX-204ENST00000379817 RPL22P35268 128 aaKnown RBP10.81□□□□□ -0.68
APTX-204ENST00000379817 ATP5OP48047 213 aa10.81□□□□□ -0.68
APTX-204ENST00000379817 PITX1P78337 314 aaPredicted RBP10.81□□□□□ -0.68
APTX-204ENST00000379817 SKOR1P84550 965 aa10.81□□□□□ -0.68
APTX-204ENST00000379817 NME3Q13232 169 aa10.81□□□□□ -0.68
APTX-204ENST00000379817 KRT71Q3SY84 523 aa10.81□□□□□ -0.68
APTX-204ENST00000379817 RNASEH2BQ5TBB1 312 aaKnown RBP10.81□□□□□ -0.68
APTX-204ENST00000379817 AGBL2Q5U5Z8 902 aa10.81□□□□□ -0.68
APTX-204ENST00000379817 SLC39A5Q6ZMH5 540 aa10.81□□□□□ -0.68
APTX-204ENST00000379817 CSPG4P5Q96PW8 444 aa10.81□□□□□ -0.68
APTX-204ENST00000379817 KCTD15Q96SI1 283 aaPredicted RBP10.81□□□□□ -0.68
APTX-204ENST00000379817 TMEM109Q9BVC6 243 aa10.81□□□□□ -0.68
APTX-204ENST00000379817 COLEC11Q9BWP8 271 aa10.81□□□□□ -0.68
APTX-204ENST00000379817 ZCWPW1Q9H0M4 648 aa10.81□□□□□ -0.68
APTX-204ENST00000379817 HIPK3Q9H422 1215 aa10.81□□□□□ -0.68
APTX-204ENST00000379817 C10orf88Q9H8K7 445 aa10.81□□□□□ -0.68
APTX-204ENST00000379817 SHOC2Q9UQ13 582 aa10.81□□□□□ -0.68
APTX-204ENST00000379817 USP3Q9Y6I4 520 aa10.81□□□□□ -0.68
APTX-204ENST00000379817 SYNJ2BP-COX16A0A087WUM0 186 aa10.8□□□□□ -0.68
APTX-204ENST00000379817 BCLAF3A2AJT9 711 aaKnown RBP10.8□□□□□ -0.68
APTX-204ENST00000379817 CXCL10P02778 98 aa10.8□□□□□ -0.68
APTX-204ENST00000379817 GRIK1P39086 918 aa10.8□□□□□ -0.68
APTX-204ENST00000379817 ATN1P54259 1190 aaPredicted RBP10.8□□□□□ -0.68
APTX-204ENST00000379817 XRCC4Q13426 336 aa10.8□□□□□ -0.68
APTX-204ENST00000379817 NFE2Q16621 373 aaPredicted RBP10.8□□□□□ -0.68
APTX-204ENST00000379817 EFHC2Q5JST6 749 aa10.8□□□□□ -0.68
APTX-204ENST00000379817 EMC10Q5UCC4 262 aa10.8□□□□□ -0.68
APTX-204ENST00000379817 BZW1Q7L1Q6 419 aaKnown RBP10.8□□□□□ -0.68
APTX-204ENST00000379817 BEND5Q7L4P6 421 aa10.8□□□□□ -0.68
APTX-204ENST00000379817 BHLHA9Q7RTU4 235 aa10.8□□□□□ -0.68
APTX-204ENST00000379817 PPIL6Q8IXY8 311 aa10.8□□□□□ -0.68
APTX-204ENST00000379817 CRIPAKQ8N1N5 446 aa10.8□□□□□ -0.68
APTX-204ENST00000379817 NTAN1Q96AB6 310 aa10.8□□□□□ -0.68
APTX-204ENST00000379817 TOX2Q96NM4 488 aa10.8□□□□□ -0.68
APTX-204ENST00000379817 RBM15Q96T37 977 aaKnown RBP eCLIP10.8□□□□□ -0.68
APTX-204ENST00000379817 MRPL9Q9BYD2 267 aaKnown RBP10.8□□□□□ -0.68
APTX-204ENST00000379817 PIGVQ9NUD9 493 aa10.8□□□□□ -0.68
APTX-204ENST00000379817 COX16Q9P0S2 106 aa10.8□□□□□ -0.68
APTX-204ENST00000379817 ADAM28Q9UKQ2 775 aa10.8□□□□□ -0.68
APTX-204ENST00000379817 HTTP42858 3142 aa10.8□□□□□ -0.68
APTX-204ENST00000379817 A0A087WUV0 522 aaPredicted RBP10.79□□□□□ -0.68
APTX-204ENST00000379817 H3BRJ5 948 aa10.79□□□□□ -0.68
APTX-204ENST00000379817 ADRA1BP35368 520 aa10.79□□□□□ -0.68
APTX-204ENST00000379817 CTCFP49711 727 aaPredicted RBP10.79□□□□□ -0.68
APTX-204ENST00000379817 KYNUQ16719 465 aa10.79□□□□□ -0.68
APTX-204ENST00000379817 ARL13BQ3SXY8 428 aa10.79□□□□□ -0.68
APTX-204ENST00000379817 TTC31Q49AM3 519 aaPredicted RBP10.79□□□□□ -0.68
APTX-204ENST00000379817 SLC39A12Q504Y0 691 aa10.79□□□□□ -0.68
APTX-204ENST00000379817 C6orf118Q5T5N4 469 aa10.79□□□□□ -0.68
APTX-204ENST00000379817 BSPRYQ5W0U4 402 aa10.79□□□□□ -0.68
APTX-204ENST00000379817 NPAS4Q8IUM7 802 aa10.79□□□□□ -0.68
APTX-204ENST00000379817 PYROXD2Q8N2H3 581 aa10.79□□□□□ -0.68
APTX-204ENST00000379817 SH2D3CQ8N5H7 860 aa10.79□□□□□ -0.68
APTX-204ENST00000379817 SCLYQ96I15 445 aa10.79□□□□□ -0.68
APTX-204ENST00000379817 FUBP3Q96I24 572 aaKnown RBP eCLIP10.79□□□□□ -0.68
APTX-204ENST00000379817 PWWP2AQ96N64 755 aa10.79□□□□□ -0.68
APTX-204ENST00000379817 MAGEB5Q9BZ81 275 aa10.79□□□□□ -0.68
APTX-204ENST00000379817 ROPN1BQ9BZX4 212 aaPredicted RBP10.79□□□□□ -0.68
APTX-204ENST00000379817 ROPN1Q9HAT0 212 aaPredicted RBP10.79□□□□□ -0.68
APTX-204ENST00000379817 USP29Q9HBJ7 922 aa10.79□□□□□ -0.68
APTX-204ENST00000379817 BCCIPQ9P287 314 aaKnown RBP eCLIP10.79□□□□□ -0.68
APTX-204ENST00000379817 FBXW11Q9UKB1 542 aa10.79□□□□□ -0.68
APTX-204ENST00000379817 FARP1Q9Y4F1 1045 aaPredicted RBP10.79□□□□□ -0.68
APTX-204ENST00000379817 DNAH12Q6ZR08 3092 aa10.79□□□□□ -0.68
APTX-204ENST00000379817 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.79□□□□□ -0.68
APTX-204ENST00000379817 GOT1P17174 413 aa10.79□□□□□ -0.68
APTX-204ENST00000379817 MAGEA4P43358 317 aa10.79□□□□□ -0.68
APTX-204ENST00000379817 CCL23P55773 120 aa10.79□□□□□ -0.68
APTX-204ENST00000379817 FAAP100Q0VG06 881 aa10.79□□□□□ -0.68
APTX-204ENST00000379817 SCAPQ12770 1279 aa10.79□□□□□ -0.68
APTX-204ENST00000379817 TCTN1Q2MV58 587 aa10.79□□□□□ -0.68
APTX-204ENST00000379817 VARS2Q5ST30 1063 aaKnown RBP10.79□□□□□ -0.68
APTX-204ENST00000379817 C4orf22Q6V702 233 aa10.79□□□□□ -0.68
APTX-204ENST00000379817 CENPUQ71F23 418 aa10.79□□□□□ -0.68
APTX-204ENST00000379817 CDKL3Q8IVW4 592 aaPredicted RBP10.79□□□□□ -0.68
APTX-204ENST00000379817 CPT1BQ92523 772 aa10.79□□□□□ -0.68
APTX-204ENST00000379817 EDEM1Q92611 657 aa10.79□□□□□ -0.68
APTX-204ENST00000379817 PRCCQ92733 491 aaPredicted RBP10.79□□□□□ -0.68
APTX-204ENST00000379817 RTP4Q96DX8 246 aa10.79□□□□□ -0.68
APTX-204ENST00000379817 PGM2Q96G03 612 aa10.79□□□□□ -0.68
APTX-204ENST00000379817 TMEM175Q9BSA9 504 aa10.79□□□□□ -0.68
APTX-204ENST00000379817 CRISPLD2Q9H0B8 497 aa10.79□□□□□ -0.68
APTX-204ENST00000379817 WDR6Q9NNW5 1121 aaKnown RBP10.79□□□□□ -0.68
APTX-204ENST00000379817 DNAJC17Q9NVM6 304 aaKnown RBP10.79□□□□□ -0.68
APTX-204ENST00000379817 DDIT4Q9NX09 232 aa10.79□□□□□ -0.68
APTX-204ENST00000379817 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.79□□□□□ -0.68
APTX-204ENST00000379817 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.78□□□□□ -0.68
APTX-204ENST00000379817 OR6C75A6NL08 312 aa10.78□□□□□ -0.68
APTX-204ENST00000379817 TNFRSF10BO14763 440 aa10.78□□□□□ -0.68
APTX-204ENST00000379817 EIF3HO15372 352 aaKnown RBP eCLIP10.78□□□□□ -0.68
APTX-204ENST00000379817 KCNN4O15554 427 aa10.78□□□□□ -0.68
APTX-204ENST00000379817 ACSL3O95573 720 aa10.78□□□□□ -0.68
APTX-204ENST00000379817 OR4Q2P0C623 313 aa10.78□□□□□ -0.68
APTX-204ENST00000379817 AMPD1P23109 780 aa10.78□□□□□ -0.68
APTX-204ENST00000379817 IRAK1P51617 712 aa10.78□□□□□ -0.68
APTX-204ENST00000379817 ELAVL2Q12926 359 aaKnown RBP10.78□□□□□ -0.68
APTX-204ENST00000379817 MRPL58Q14197 206 aaKnown RBP10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms