RNA–Protein interactions for RNA: ENST00000377902.5

GNE-201, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 2,565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-201ENST00000377902 NETO2Q8NC67 525 aa18.63■□□□□ 0.57
GNE-201ENST00000377902 SIGLEC10Q96LC7 697 aa18.63■□□□□ 0.57
GNE-201ENST00000377902 HEXIM2Q96MH2 286 aaKnown RBP18.63■□□□□ 0.57
GNE-201ENST00000377902 S100A14Q9HCY8 104 aa18.63■□□□□ 0.57
GNE-201ENST00000377902 SOX13Q9UN79 622 aa18.63■□□□□ 0.57
GNE-201ENST00000377902 LOC100653049A0A140TA62 436 aa18.62■□□□□ 0.57
GNE-201ENST00000377902 PRPSAP2O60256 369 aa18.62■□□□□ 0.57
GNE-201ENST00000377902 KRT34O76011 436 aa18.62■□□□□ 0.57
GNE-201ENST00000377902 KRT38O76015 456 aa18.62■□□□□ 0.57
GNE-201ENST00000377902 TNNC2P02585 160 aa18.62■□□□□ 0.57
GNE-201ENST00000377902 GPD1P21695 349 aa18.62■□□□□ 0.57
GNE-201ENST00000377902 CRHR1P34998 444 aa18.62■□□□□ 0.57
GNE-201ENST00000377902 BACE1P56817 501 aa18.62■□□□□ 0.57
GNE-201ENST00000377902 BCAR1P56945 870 aa18.62■□□□□ 0.57
GNE-201ENST00000377902 CXCL9Q07325 125 aa18.62■□□□□ 0.57
GNE-201ENST00000377902 HIC1Q14526 733 aa18.62■□□□□ 0.57
GNE-201ENST00000377902 ZNF667Q5HYK9 610 aa18.62■□□□□ 0.57
GNE-201ENST00000377902 FAM183BPQ6ZVS7 135 aa18.62■□□□□ 0.57
GNE-201ENST00000377902 RASSF3Q86WH2 238 aa18.62■□□□□ 0.57
GNE-201ENST00000377902 ZBED3Q96IU2 234 aaPredicted RBP18.62■□□□□ 0.57
GNE-201ENST00000377902 NGRNQ9NPE2 291 aaKnown RBP18.62■□□□□ 0.57
GNE-201ENST00000377902 PNPOQ9NVS9 261 aa18.62■□□□□ 0.57
GNE-201ENST00000377902 KLHL33A6NCF5 533 aa18.62■□□□□ 0.57
GNE-201ENST00000377902 STK10O94804 968 aaKnown RBP18.62■□□□□ 0.57
GNE-201ENST00000377902 PROCP04070 461 aa18.62■□□□□ 0.57
GNE-201ENST00000377902 F7P08709 466 aaPredicted RBP18.62■□□□□ 0.57
GNE-201ENST00000377902 CYP3A5P20815 502 aa18.62■□□□□ 0.57
GNE-201ENST00000377902 ARRB2P32121 409 aa18.62■□□□□ 0.57
GNE-201ENST00000377902 ASPHQ12797 758 aa18.62■□□□□ 0.57
GNE-201ENST00000377902 TMEM132AQ24JP5 1023 aa18.62■□□□□ 0.57
GNE-201ENST00000377902 NBPF12Q5TAG4 269 aaPredicted RBP18.62■□□□□ 0.57
GNE-201ENST00000377902 C1orf127Q8N9H9 656 aa18.62■□□□□ 0.57
GNE-201ENST00000377902 DEPDC1BQ8WUY9 529 aa18.62■□□□□ 0.57
GNE-201ENST00000377902 ANKRD36BP1Q96IX9 119 aa18.62■□□□□ 0.57
GNE-201ENST00000377902 PGLYRP2Q96PD5 576 aa18.62■□□□□ 0.57
GNE-201ENST00000377902 KLC2Q9H0B6 622 aa18.62■□□□□ 0.57
GNE-201ENST00000377902 THAP1Q9NVV9 213 aa18.62■□□□□ 0.57
GNE-201ENST00000377902 PACSIN3Q9UKS6 424 aa18.62■□□□□ 0.57
GNE-201ENST00000377902 EMCNQ9ULC0 261 aa18.62■□□□□ 0.57
GNE-201ENST00000377902 C2CD4BA6NLJ0 364 aa18.61■□□□□ 0.57
GNE-201ENST00000377902 TRDMT1O14717 391 aaKnown RBP18.61■□□□□ 0.57
GNE-201ENST00000377902 ITGB3P05106 788 aa18.61■□□□□ 0.57
GNE-201ENST00000377902 CD1EP15812 388 aa18.61■□□□□ 0.57
GNE-201ENST00000377902 TFE3P19532 575 aaPredicted RBP18.61■□□□□ 0.57
GNE-201ENST00000377902 UBA1P22314 1058 aaKnown RBP18.61■□□□□ 0.57
GNE-201ENST00000377902 STAT5BP51692 787 aa18.61■□□□□ 0.57
GNE-201ENST00000377902 AQP4P55087 323 aa18.61■□□□□ 0.57
GNE-201ENST00000377902 MSLNQ13421 630 aaPredicted RBP18.61■□□□□ 0.57
GNE-201ENST00000377902 TCHHL1Q5QJ38 904 aaPredicted RBP18.61■□□□□ 0.57
GNE-201ENST00000377902 TMCO4Q5TGY1 634 aa18.61■□□□□ 0.57
GNE-201ENST00000377902 C12orf29Q8N999 325 aa18.61■□□□□ 0.57
GNE-201ENST00000377902 FAM172AQ8WUF8 416 aa18.61■□□□□ 0.57
GNE-201ENST00000377902 TRAPPC12Q8WVT3 735 aa18.61■□□□□ 0.57
GNE-201ENST00000377902 JDP2Q8WYK2 163 aa18.61■□□□□ 0.57
GNE-201ENST00000377902 PEX2P28328 305 aa18.61■□□□□ 0.57
GNE-201ENST00000377902 GRIA2P42262 883 aa18.61■□□□□ 0.57
GNE-201ENST00000377902 CCNIQ14094 377 aa18.61■□□□□ 0.57
GNE-201ENST00000377902 TFDP2Q14188 446 aa18.61■□□□□ 0.57
GNE-201ENST00000377902 STXBP2Q15833 593 aa18.61■□□□□ 0.57
GNE-201ENST00000377902 CCDC14Q49A88 953 aa18.61■□□□□ 0.57
GNE-201ENST00000377902 EFHC1Q5JVL4 640 aa18.61■□□□□ 0.57
GNE-201ENST00000377902 TEDDM1Q5T9Z0 273 aa18.61■□□□□ 0.57
GNE-201ENST00000377902 WDR78Q5VTH9 848 aa18.61■□□□□ 0.57
GNE-201ENST00000377902 OR6Y1Q8NGX8 325 aa18.61■□□□□ 0.57
GNE-201ENST00000377902 TMEM176AQ96HP8 235 aa18.61■□□□□ 0.57
GNE-201ENST00000377902 NLRP4Q96MN2 994 aa18.61■□□□□ 0.57
GNE-201ENST00000377902 SPATA16Q9BXB7 569 aa18.61■□□□□ 0.57
GNE-201ENST00000377902 ACAD9Q9H845 621 aa18.61■□□□□ 0.57
GNE-201ENST00000377902 FAM159BA6NKW6 160 aa18.6■□□□□ 0.57
GNE-201ENST00000377902 APOL1O14791 398 aa18.6■□□□□ 0.57
GNE-201ENST00000377902 AOC1P19801 751 aa18.6■□□□□ 0.57
GNE-201ENST00000377902 RPS6KA3P51812 740 aa18.6■□□□□ 0.57
GNE-201ENST00000377902 GBE1Q04446 702 aa18.6■□□□□ 0.57
GNE-201ENST00000377902 WASHC5Q12768 1159 aa18.6■□□□□ 0.57
GNE-201ENST00000377902 SLC10A2Q12908 348 aaPredicted RBP18.6■□□□□ 0.57
GNE-201ENST00000377902 DLG1Q12959 904 aa18.6■□□□□ 0.57
GNE-201ENST00000377902 GRM1Q13255 1194 aa18.6■□□□□ 0.57
GNE-201ENST00000377902 PRKG1Q13976 671 aa18.6■□□□□ 0.57
GNE-201ENST00000377902 FAM47CQ5HY64 1035 aa18.6■□□□□ 0.57
GNE-201ENST00000377902 RABGAP1LQ5R372 815 aa18.6■□□□□ 0.57
GNE-201ENST00000377902 N4BP2L1Q5TBK1 243 aaPredicted RBP18.6■□□□□ 0.57
GNE-201ENST00000377902 MBLAC2Q68D91 279 aa18.6■□□□□ 0.57
GNE-201ENST00000377902 DHDDSQ86SQ9 333 aa18.6■□□□□ 0.57
GNE-201ENST00000377902 PDSS2Q86YH6 399 aa18.6■□□□□ 0.57
GNE-201ENST00000377902 MTMR14Q8NCE2 650 aa18.6■□□□□ 0.57
GNE-201ENST00000377902 GSDMBQ8TAX9 411 aa18.6■□□□□ 0.57
GNE-201ENST00000377902 KCNN1Q92952 543 aa18.6■□□□□ 0.57
GNE-201ENST00000377902 AZIN2Q96A70 460 aa18.6■□□□□ 0.57
GNE-201ENST00000377902 CNPY3Q9BT09 278 aa18.6■□□□□ 0.57
GNE-201ENST00000377902 BCO2Q9BYV7 579 aa18.6■□□□□ 0.57
GNE-201ENST00000377902 OCEL1Q9H607 264 aa18.6■□□□□ 0.57
GNE-201ENST00000377902 INO80B-WBP1J3KQ70 363 aa18.6■□□□□ 0.57
GNE-201ENST00000377902 SIN3BO75182 1162 aa18.6■□□□□ 0.57
GNE-201ENST00000377902 MAFO75444 373 aaPredicted RBP18.6■□□□□ 0.57
GNE-201ENST00000377902 SPATA31D3P0C874 917 aa18.6■□□□□ 0.57
GNE-201ENST00000377902 FGF3P11487 239 aaPredicted RBP18.6■□□□□ 0.57
GNE-201ENST00000377902 TCF7P36402 384 aaPredicted RBP18.6■□□□□ 0.57
GNE-201ENST00000377902 SLC1A6P48664 564 aa18.6■□□□□ 0.57
GNE-201ENST00000377902 ATXN1P54253 815 aaKnown RBP18.6■□□□□ 0.57
GNE-201ENST00000377902 PPM1JQ5JR12 505 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms