RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 CCDC33Q8N5R6 958 aa20.97■□□□□ 0.95
VSX1-202ENST00000376709 GAD1Q99259 594 aa20.97■□□□□ 0.95
VSX1-202ENST00000376709 SYNJ2BP-COX16A0A087WUM0 186 aa20.96■□□□□ 0.95
VSX1-202ENST00000376709 TCRBV9S1A1TA0A576 114 aa20.96■□□□□ 0.95
VSX1-202ENST00000376709 MYCNP04198 464 aaPredicted RBP20.96■□□□□ 0.95
VSX1-202ENST00000376709 GOT1P17174 413 aa20.96■□□□□ 0.95
VSX1-202ENST00000376709 TAC1P20366 129 aa20.96■□□□□ 0.95
VSX1-202ENST00000376709 MRPS5P82675 430 aaKnown RBP20.96■□□□□ 0.95
VSX1-202ENST00000376709 CAP1Q01518 475 aa20.96■□□□□ 0.95
VSX1-202ENST00000376709 SLC10A2Q12908 348 aaPredicted RBP20.96■□□□□ 0.95
VSX1-202ENST00000376709 CLEC20AQ6ZU45 233 aa20.96■□□□□ 0.95
VSX1-202ENST00000376709 SPATA21Q7Z572 469 aa20.96■□□□□ 0.95
VSX1-202ENST00000376709 VPS52Q8N1B4 723 aa20.96■□□□□ 0.95
VSX1-202ENST00000376709 PYROXD2Q8N2H3 581 aa20.96■□□□□ 0.95
VSX1-202ENST00000376709 DENND1AQ8TEH3 1009 aa20.96■□□□□ 0.95
VSX1-202ENST00000376709 SENP8Q96LD8 212 aa20.96■□□□□ 0.95
VSX1-202ENST00000376709 UPF3AQ9H1J1 476 aaKnown RBP20.96■□□□□ 0.95
VSX1-202ENST00000376709 ETNK1Q9HBU6 452 aa20.96■□□□□ 0.95
VSX1-202ENST00000376709 DDX43Q9NXZ2 648 aaKnown RBP20.96■□□□□ 0.95
VSX1-202ENST00000376709 COX16Q9P0S2 106 aa20.96■□□□□ 0.95
VSX1-202ENST00000376709 SCN10AQ9Y5Y9 1956 aa20.96■□□□□ 0.95
VSX1-202ENST00000376709 GABRDO14764 452 aa20.96■□□□□ 0.95
VSX1-202ENST00000376709 DAB1O75553 588 aa20.96■□□□□ 0.95
VSX1-202ENST00000376709 SPAG6O75602 509 aa20.96■□□□□ 0.95
VSX1-202ENST00000376709 TOMM70O94826 608 aa20.96■□□□□ 0.95
VSX1-202ENST00000376709 THP07101 528 aa20.96■□□□□ 0.95
VSX1-202ENST00000376709 GHRP10912 638 aa20.96■□□□□ 0.95
VSX1-202ENST00000376709 IGFBP6P24592 240 aaPredicted RBP20.96■□□□□ 0.95
VSX1-202ENST00000376709 FOXN2P32314 431 aa20.96■□□□□ 0.95
VSX1-202ENST00000376709 SCTRP47872 440 aa20.96■□□□□ 0.95
VSX1-202ENST00000376709 KCNT2Q6UVM3 1135 aa20.96■□□□□ 0.95
VSX1-202ENST00000376709 C4orf22Q6V702 233 aa20.96■□□□□ 0.95
VSX1-202ENST00000376709 DCAKDQ8WVC6 231 aa20.96■□□□□ 0.95
VSX1-202ENST00000376709 PITPNM3Q9BZ71 974 aa20.96■□□□□ 0.95
VSX1-202ENST00000376709 SPC25Q9HBM1 224 aa20.96■□□□□ 0.95
VSX1-202ENST00000376709 KRT82Q9NSB4 513 aa20.96■□□□□ 0.95
VSX1-202ENST00000376709 TYROBPO43914 113 aa20.95■□□□□ 0.94
VSX1-202ENST00000376709 FAM200BP0CF97 657 aa20.95■□□□□ 0.94
VSX1-202ENST00000376709 AMPD1P23109 780 aa20.95■□□□□ 0.94
VSX1-202ENST00000376709 MAP3K7CLP57077 242 aa20.95■□□□□ 0.94
VSX1-202ENST00000376709 NCBP2-AS2Q69YL0 99 aa20.95■□□□□ 0.94
VSX1-202ENST00000376709 HEATR6Q6AI08 1181 aaKnown RBP20.95■□□□□ 0.94
VSX1-202ENST00000376709 PAQR9Q6ZVX9 377 aa20.95■□□□□ 0.94
VSX1-202ENST00000376709 LPPQ93052 612 aa20.95■□□□□ 0.94
VSX1-202ENST00000376709 CFAP36Q96G28 342 aa20.95■□□□□ 0.94
VSX1-202ENST00000376709 FZD10Q9ULW2 581 aa20.95■□□□□ 0.94
VSX1-202ENST00000376709 STAP1Q9ULZ2 295 aa20.95■□□□□ 0.94
VSX1-202ENST00000376709 SEPT4O43236 478 aa20.95■□□□□ 0.94
VSX1-202ENST00000376709 NDUFV1P49821 464 aa20.95■□□□□ 0.94
VSX1-202ENST00000376709 CLCNKBP51801 687 aa20.95■□□□□ 0.94
VSX1-202ENST00000376709 AFF1P51825 1210 aaKnown RBP20.95■□□□□ 0.94
VSX1-202ENST00000376709 CACNB2Q08289 660 aaPredicted RBP20.95■□□□□ 0.94
VSX1-202ENST00000376709 KBTBD12Q3ZCT8 623 aa20.95■□□□□ 0.94
VSX1-202ENST00000376709 HHATQ5VTY9 493 aa20.95■□□□□ 0.94
VSX1-202ENST00000376709 FAM47EQ6ZV65 393 aa20.95■□□□□ 0.94
VSX1-202ENST00000376709 GSTCDQ8NEC7 633 aa20.95■□□□□ 0.94
VSX1-202ENST00000376709 KCTD13Q8WZ19 329 aa20.95■□□□□ 0.94
VSX1-202ENST00000376709 QKIQ96PU8 341 aaKnown RBP eCLIP20.95■□□□□ 0.94
VSX1-202ENST00000376709 SSU72Q9NP77 194 aaKnown RBP20.95■□□□□ 0.94
VSX1-202ENST00000376709 DTLQ9NZJ0 730 aa20.95■□□□□ 0.94
VSX1-202ENST00000376709 GCATO75600 419 aa20.94■□□□□ 0.94
VSX1-202ENST00000376709 INHBAP08476 426 aa20.94■□□□□ 0.94
VSX1-202ENST00000376709 FAM163BP0C2L3 166 aa20.94■□□□□ 0.94
VSX1-202ENST00000376709 NOS2P35228 1153 aa20.94■□□□□ 0.94
VSX1-202ENST00000376709 TKTL1P51854 596 aa20.94■□□□□ 0.94
VSX1-202ENST00000376709 MTFR1Q15390 333 aa20.94■□□□□ 0.94
VSX1-202ENST00000376709 SEPT7Q16181 437 aaKnown RBP20.94■□□□□ 0.94
VSX1-202ENST00000376709 KIAA0319Q5VV43 1072 aa20.94■□□□□ 0.94
VSX1-202ENST00000376709 ABCF3Q9NUQ8 709 aa20.94■□□□□ 0.94
VSX1-202ENST00000376709 ZC3H7BQ9UGR2 993 aaKnown RBP20.94■□□□□ 0.94
VSX1-202ENST00000376709 ARL2BPQ9Y2Y0 163 aa20.94■□□□□ 0.94
VSX1-202ENST00000376709 BRCA2P51587 3418 aa20.94■□□□□ 0.94
VSX1-202ENST00000376709 M0QYT0 321 aa20.93■□□□□ 0.94
VSX1-202ENST00000376709 ZWINTO95229 277 aa20.93■□□□□ 0.94
VSX1-202ENST00000376709 MAGEA6P43360 314 aa20.93■□□□□ 0.94
VSX1-202ENST00000376709 PITX1P78337 314 aaPredicted RBP20.93■□□□□ 0.94
VSX1-202ENST00000376709 DNAJC3Q13217 504 aa20.93■□□□□ 0.94
VSX1-202ENST00000376709 NME3Q13232 169 aa20.93■□□□□ 0.94
VSX1-202ENST00000376709 PTK7Q13308 1070 aa20.93■□□□□ 0.94
VSX1-202ENST00000376709 DSTYKQ6XUX3 929 aa20.93■□□□□ 0.94
VSX1-202ENST00000376709 AGGF1Q8N302 714 aaeCLIP20.93■□□□□ 0.94
VSX1-202ENST00000376709 GRAMD1AQ96CP6 724 aa20.93■□□□□ 0.94
VSX1-202ENST00000376709 SYT15Q9BQS2 421 aa20.93■□□□□ 0.94
VSX1-202ENST00000376709 SENP6Q9GZR1 1112 aaPredicted RBP20.93■□□□□ 0.94
VSX1-202ENST00000376709 CRTAC1Q9NQ79 661 aa20.93■□□□□ 0.94
VSX1-202ENST00000376709 CHST12Q9NRB3 414 aa20.93■□□□□ 0.94
VSX1-202ENST00000376709 RCOR3Q9P2K3 495 aaPredicted RBP20.93■□□□□ 0.94
VSX1-202ENST00000376709 MFHAS1Q9Y4C4 1052 aa20.93■□□□□ 0.94
VSX1-202ENST00000376709 TIMM13Q9Y5L4 95 aaPredicted RBP20.93■□□□□ 0.94
VSX1-202ENST00000376709 USP3Q9Y6I4 520 aa20.93■□□□□ 0.94
VSX1-202ENST00000376709 IQANK1A0A1B0GTG1 560 aa20.93■□□□□ 0.94
VSX1-202ENST00000376709 ARL5CA6NH57 179 aa20.93■□□□□ 0.94
VSX1-202ENST00000376709 ADAMTS4O75173 837 aa20.93■□□□□ 0.94
VSX1-202ENST00000376709 CHRNA1P02708 482 aa20.93■□□□□ 0.94
VSX1-202ENST00000376709 CCND3P30281 292 aaPredicted RBP20.93■□□□□ 0.94
VSX1-202ENST00000376709 LHX1P48742 406 aa20.93■□□□□ 0.94
VSX1-202ENST00000376709 SLC1A5Q15758 541 aa20.93■□□□□ 0.94
VSX1-202ENST00000376709 BZW1Q7L1Q6 419 aaKnown RBP20.93■□□□□ 0.94
VSX1-202ENST00000376709 CAND1Q86VP6 1230 aaKnown RBP20.93■□□□□ 0.94
VSX1-202ENST00000376709 PSTKQ8IV42 348 aaKnown RBP20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms