RNA–Protein interactions for RNA: ENST00000374826.8

PMS1-202, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best) BASIC

Gene PMS1, Length 948 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-202ENST00000374826 MVPQ14764 893 aaKnown RBP5.3□□□□□ -1.56
PMS1-202ENST00000374826 TTF1Q15361 905 aaPredicted RBP5.3□□□□□ -1.56
PMS1-202ENST00000374826 FCRLBQ6BAA4 426 aa5.3□□□□□ -1.56
PMS1-202ENST00000374826 FAM46DQ8NEK8 389 aa5.3□□□□□ -1.56
PMS1-202ENST00000374826 STAG1Q8WVM7 1258 aa5.3□□□□□ -1.56
PMS1-202ENST00000374826 SLC35A4Q96G79 324 aa5.3□□□□□ -1.56
PMS1-202ENST00000374826 PBKQ96KB5 322 aa5.3□□□□□ -1.56
PMS1-202ENST00000374826 PSMD1Q99460 953 aa5.3□□□□□ -1.56
PMS1-202ENST00000374826 MPHOSPH8Q99549 860 aa5.3□□□□□ -1.56
PMS1-202ENST00000374826 PUS3Q9BZE2 481 aaKnown RBP5.3□□□□□ -1.56
PMS1-202ENST00000374826 TPSD1Q9BZJ3 242 aa5.3□□□□□ -1.56
PMS1-202ENST00000374826 CNNM1Q9NRU3 951 aa5.3□□□□□ -1.56
PMS1-202ENST00000374826 DDX56Q9NY93 547 aaKnown RBP5.3□□□□□ -1.56
PMS1-202ENST00000374826 POLLQ9UGP5 575 aa5.3□□□□□ -1.56
PMS1-202ENST00000374826 NAV1Q8NEY1 1877 aa5.3□□□□□ -1.56
PMS1-202ENST00000374826 LINC00473A8K010 186 aa5.29□□□□□ -1.56
PMS1-202ENST00000374826 VWC2LB2RUY7 222 aa5.29□□□□□ -1.56
PMS1-202ENST00000374826 SNAP23O00161 211 aa5.29□□□□□ -1.56
PMS1-202ENST00000374826 TAF5LO75529 589 aa5.29□□□□□ -1.56
PMS1-202ENST00000374826 OFD1O75665 1012 aa5.29□□□□□ -1.56
PMS1-202ENST00000374826 RHOP08100 348 aa5.29□□□□□ -1.56
PMS1-202ENST00000374826 KLRK1P26718 216 aa5.29□□□□□ -1.56
PMS1-202ENST00000374826 CD6P30203 668 aa5.29□□□□□ -1.56
PMS1-202ENST00000374826 GCLCP48506 637 aaPredicted RBP5.29□□□□□ -1.56
PMS1-202ENST00000374826 CHRNDQ07001 517 aa5.29□□□□□ -1.56
PMS1-202ENST00000374826 MCL1Q07820 350 aa5.29□□□□□ -1.56
PMS1-202ENST00000374826 PIN1Q13526 163 aaPredicted RBP5.29□□□□□ -1.56
PMS1-202ENST00000374826 LRRC24Q50LG9 513 aa5.29□□□□□ -1.56
PMS1-202ENST00000374826 ATAT1Q5SQI0 421 aa5.29□□□□□ -1.56
PMS1-202ENST00000374826 RBM20Q5T481 1227 aaKnown RBP5.29□□□□□ -1.56
PMS1-202ENST00000374826 IFIT1BQ5T764 474 aaKnown RBP5.29□□□□□ -1.56
PMS1-202ENST00000374826 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.29□□□□□ -1.56
PMS1-202ENST00000374826 LDHAL6AQ6ZMR3 332 aa5.29□□□□□ -1.56
PMS1-202ENST00000374826 GRAMD1CQ8IYS0 662 aa5.29□□□□□ -1.56
PMS1-202ENST00000374826 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.29□□□□□ -1.56
PMS1-202ENST00000374826 TBC1D16Q8TBP0 767 aa5.29□□□□□ -1.56
PMS1-202ENST00000374826 CDK5RAP3Q96JB5 506 aa5.29□□□□□ -1.56
PMS1-202ENST00000374826 ALG8Q9BVK2 526 aa5.29□□□□□ -1.56
PMS1-202ENST00000374826 ACTRT3Q9BYD9 372 aa5.29□□□□□ -1.56
PMS1-202ENST00000374826 AMBRA1Q9C0C7 1298 aa5.29□□□□□ -1.56
PMS1-202ENST00000374826 SIL1Q9H173 461 aa5.29□□□□□ -1.56
PMS1-202ENST00000374826 DBNDD1Q9H9R9 158 aa5.29□□□□□ -1.56
PMS1-202ENST00000374826 FLRT1Q9NZU1 646 aa5.29□□□□□ -1.56
PMS1-202ENST00000374826 PA2G4Q9UQ80 394 aaKnown RBP5.29□□□□□ -1.56
PMS1-202ENST00000374826 WNT6Q9Y6F9 365 aa5.29□□□□□ -1.56
PMS1-202ENST00000374826 LAMB1P07942 1786 aa5.29□□□□□ -1.56
PMS1-202ENST00000374826 MED23Q9ULK4 1368 aa5.29□□□□□ -1.56
PMS1-202ENST00000374826 ZNF804BA4D1E1 1349 aa5.28□□□□□ -1.56
PMS1-202ENST00000374826 PNMA6EA0A0J9YXQ4 647 aa5.28□□□□□ -1.56
PMS1-202ENST00000374826 E2F8A0AVK6 867 aa5.28□□□□□ -1.56
PMS1-202ENST00000374826 YDJCA8MPS7 323 aa5.28□□□□□ -1.56
PMS1-202ENST00000374826 URI1O94763 535 aaPredicted RBP5.28□□□□□ -1.56
PMS1-202ENST00000374826 ALDH2P05091 517 aa5.28□□□□□ -1.56
PMS1-202ENST00000374826 PIM1P11309 404 aaPredicted RBP5.28□□□□□ -1.56
PMS1-202ENST00000374826 HDCP19113 662 aa5.28□□□□□ -1.56
PMS1-202ENST00000374826 KCNJ4P48050 445 aa5.28□□□□□ -1.56
PMS1-202ENST00000374826 RFX5P48382 616 aaPredicted RBP5.28□□□□□ -1.56
PMS1-202ENST00000374826 SOX8P57073 446 aa5.28□□□□□ -1.56
PMS1-202ENST00000374826 EIF2B5Q13144 721 aaKnown RBP5.28□□□□□ -1.56
PMS1-202ENST00000374826 BOP1Q14137 746 aaKnown RBP5.28□□□□□ -1.56
PMS1-202ENST00000374826 EMC10Q5UCC4 262 aa5.28□□□□□ -1.56
PMS1-202ENST00000374826 FAM160B1Q5W0V3 765 aa5.28□□□□□ -1.56
PMS1-202ENST00000374826 C11orf87Q6NUJ2 197 aa5.28□□□□□ -1.56
PMS1-202ENST00000374826 AMIGO2Q86SJ2 522 aa5.28□□□□□ -1.56
PMS1-202ENST00000374826 FAM109AQ8N4B1 249 aa5.28□□□□□ -1.56
PMS1-202ENST00000374826 JDP2Q8WYK2 163 aa5.28□□□□□ -1.56
PMS1-202ENST00000374826 FAM136AQ96C01 138 aa5.28□□□□□ -1.56
PMS1-202ENST00000374826 MTFMTQ96DP5 389 aaKnown RBP5.28□□□□□ -1.56
PMS1-202ENST00000374826 C1GALT1C1Q96EU7 318 aa5.28□□□□□ -1.56
PMS1-202ENST00000374826 EYA3Q99504 573 aa5.28□□□□□ -1.56
PMS1-202ENST00000374826 CGRRF1Q99675 332 aa5.28□□□□□ -1.56
PMS1-202ENST00000374826 RTFDC1Q9BY42 306 aaPredicted RBP5.28□□□□□ -1.56
PMS1-202ENST00000374826 RHOBTB2Q9BYZ6 727 aa5.28□□□□□ -1.56
PMS1-202ENST00000374826 SARS2Q9NP81 518 aaKnown RBP5.28□□□□□ -1.56
PMS1-202ENST00000374826 NMRK2Q9NPI5 230 aa5.28□□□□□ -1.56
PMS1-202ENST00000374826 EHD3Q9NZN3 535 aa5.28□□□□□ -1.56
PMS1-202ENST00000374826 HESX1Q9UBX0 185 aa5.28□□□□□ -1.56
PMS1-202ENST00000374826 ADAM21Q9UKJ8 722 aa5.28□□□□□ -1.56
PMS1-202ENST00000374826 PNMA8BQ9ULN7 279 aaPredicted RBP5.28□□□□□ -1.56
PMS1-202ENST00000374826 DDX19BQ9UMR2 479 aa5.28□□□□□ -1.56
PMS1-202ENST00000374826 ST3GAL5Q9UNP4 418 aa5.28□□□□□ -1.56
PMS1-202ENST00000374826 STXBP5LQ9Y2K9 1186 aa5.28□□□□□ -1.56
PMS1-202ENST00000374826 ZNF609O15014 1411 aa5.28□□□□□ -1.56
PMS1-202ENST00000374826 PTPRFP10586 1907 aa5.27□□□□□ -1.57
PMS1-202ENST00000374826 GCOM1H8Y6P7 765 aaPredicted RBP5.27□□□□□ -1.57
PMS1-202ENST00000374826 EYA2O00167 538 aa5.27□□□□□ -1.57
PMS1-202ENST00000374826 ECE2O60344 883 aa5.27□□□□□ -1.57
PMS1-202ENST00000374826 DDNO94850 711 aaPredicted RBP5.27□□□□□ -1.57
PMS1-202ENST00000374826 TTLL1O95922 423 aa5.27□□□□□ -1.57
PMS1-202ENST00000374826 NR2F6P10588 404 aa5.27□□□□□ -1.57
PMS1-202ENST00000374826 IRX6P78412 446 aaPredicted RBP5.27□□□□□ -1.57
PMS1-202ENST00000374826 MTX1Q13505 466 aa5.27□□□□□ -1.57
PMS1-202ENST00000374826 ZNF267Q14586 743 aaPredicted RBP5.27□□□□□ -1.57
PMS1-202ENST00000374826 MTX3Q5HYI7 312 aa5.27□□□□□ -1.57
PMS1-202ENST00000374826 CEP85Q6P2H3 762 aa5.27□□□□□ -1.57
PMS1-202ENST00000374826 VGLL2Q8N8G2 317 aa5.27□□□□□ -1.57
PMS1-202ENST00000374826 PCSK9Q8NBP7 692 aaKnown RBP5.27□□□□□ -1.57
PMS1-202ENST00000374826 SEMA6DQ8NFY4 1073 aa5.27□□□□□ -1.57
PMS1-202ENST00000374826 DIS3LQ8TF46 1054 aaKnown RBP5.27□□□□□ -1.57
PMS1-202ENST00000374826 RFKQ969G6 155 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms