RNA–Protein interactions for RNA: ENST00000374676.4

HSPG2-202, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 411 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-202ENST00000374676 ST13P5Q8NFI4 369 aaPredicted RBP11.86□□□□□ -0.51
HSPG2-202ENST00000374676 RIN3Q8TB24 985 aa11.86□□□□□ -0.51
HSPG2-202ENST00000374676 NT5C3BQ969T7 300 aa11.86□□□□□ -0.51
HSPG2-202ENST00000374676 PLD4Q96BZ4 506 aa11.86□□□□□ -0.51
HSPG2-202ENST00000374676 SERPINB11Q96P15 392 aa11.86□□□□□ -0.51
HSPG2-202ENST00000374676 NPY6RQ99463 290 aa11.86□□□□□ -0.51
HSPG2-202ENST00000374676 FAM83CQ9BQN1 747 aa11.86□□□□□ -0.51
HSPG2-202ENST00000374676 TRMT61BQ9BVS5 477 aaKnown RBP11.86□□□□□ -0.51
HSPG2-202ENST00000374676 DCLK3Q9C098 648 aa11.86□□□□□ -0.51
HSPG2-202ENST00000374676 TRPV5Q9NQA5 729 aa11.86□□□□□ -0.51
HSPG2-202ENST00000374676 SMPD4Q9NXE4 827 aa11.86□□□□□ -0.51
HSPG2-202ENST00000374676 CFAP97Q9P2B7 532 aa11.86□□□□□ -0.51
HSPG2-202ENST00000374676 SFMBT1Q9UHJ3 866 aa11.86□□□□□ -0.51
HSPG2-202ENST00000374676 C2CD4BA6NLJ0 364 aa11.85□□□□□ -0.51
HSPG2-202ENST00000374676 SLC9A3R1O14745 358 aaPredicted RBP11.85□□□□□ -0.51
HSPG2-202ENST00000374676 GREM1O60565 184 aa11.85□□□□□ -0.51
HSPG2-202ENST00000374676 STC2O76061 302 aa11.85□□□□□ -0.51
HSPG2-202ENST00000374676 LCA5LO95447 670 aa11.85□□□□□ -0.51
HSPG2-202ENST00000374676 TRUB2O95900 331 aaKnown RBP11.85□□□□□ -0.51
HSPG2-202ENST00000374676 F9P00740 461 aa11.85□□□□□ -0.51
HSPG2-202ENST00000374676 SRFP11831 508 aa11.85□□□□□ -0.51
HSPG2-202ENST00000374676 GBP1P32455 592 aa11.85□□□□□ -0.51
HSPG2-202ENST00000374676 FLT3P36888 993 aa11.85□□□□□ -0.51
HSPG2-202ENST00000374676 RNASE9P60153 205 aaKnown RBP11.85□□□□□ -0.51
HSPG2-202ENST00000374676 GPC5P78333 572 aa11.85□□□□□ -0.51
HSPG2-202ENST00000374676 RING1Q06587 406 aa11.85□□□□□ -0.51
HSPG2-202ENST00000374676 MAMLD1Q13495 774 aa11.85□□□□□ -0.51
HSPG2-202ENST00000374676 PDGFRLQ15198 375 aa11.85□□□□□ -0.51
HSPG2-202ENST00000374676 SLC25A52Q3SY17 297 aa11.85□□□□□ -0.51
HSPG2-202ENST00000374676 C10orf76Q5T2E6 689 aa11.85□□□□□ -0.51
HSPG2-202ENST00000374676 CC2D1AQ6P1N0 951 aaPredicted RBP11.85□□□□□ -0.51
HSPG2-202ENST00000374676 DNAJC24Q6P3W2 148 aa11.85□□□□□ -0.51
HSPG2-202ENST00000374676 PHLDB2Q86SQ0 1253 aa11.85□□□□□ -0.51
HSPG2-202ENST00000374676 DNAAF5Q86Y56 855 aa11.85□□□□□ -0.51
HSPG2-202ENST00000374676 OSCP1Q8WVF1 389 aa11.85□□□□□ -0.51
HSPG2-202ENST00000374676 IRF7Q92985 503 aa11.85□□□□□ -0.51
HSPG2-202ENST00000374676 AZIN2Q96A70 460 aa11.85□□□□□ -0.51
HSPG2-202ENST00000374676 OTUB2Q96DC9 234 aa11.85□□□□□ -0.51
HSPG2-202ENST00000374676 PGAP3Q96FM1 320 aaPredicted RBP11.85□□□□□ -0.51
HSPG2-202ENST00000374676 SLC39A13Q96H72 371 aa11.85□□□□□ -0.51
HSPG2-202ENST00000374676 SELENOOQ9BVL4 669 aa11.85□□□□□ -0.51
HSPG2-202ENST00000374676 SLC2A4RGQ9NR83 387 aa11.85□□□□□ -0.51
HSPG2-202ENST00000374676 METTL5Q9NRN9 209 aaKnown RBP11.85□□□□□ -0.51
HSPG2-202ENST00000374676 PARVAQ9NVD7 372 aa11.85□□□□□ -0.51
HSPG2-202ENST00000374676 TBC1D14Q9P2M4 693 aa11.85□□□□□ -0.51
HSPG2-202ENST00000374676 CNOT8Q9UFF9 292 aaKnown RBP11.85□□□□□ -0.51
HSPG2-202ENST00000374676 LSM7Q9UK45 103 aaKnown RBP11.85□□□□□ -0.51
HSPG2-202ENST00000374676 STAP1Q9ULZ2 295 aa11.85□□□□□ -0.51
HSPG2-202ENST00000374676 TLR6Q9Y2C9 796 aa11.85□□□□□ -0.51
HSPG2-202ENST00000374676 ZNF510Q9Y2H8 683 aa11.85□□□□□ -0.51
HSPG2-202ENST00000374676 SH3BP1Q9Y3L3 701 aa11.85□□□□□ -0.51
HSPG2-202ENST00000374676 ZNF263O14978 683 aa11.84□□□□□ -0.51
HSPG2-202ENST00000374676 IRAK2O43187 625 aa11.84□□□□□ -0.51
HSPG2-202ENST00000374676 ENDOD1O94919 500 aa11.84□□□□□ -0.51
HSPG2-202ENST00000374676 IGLV3-27P01718 113 aa11.84□□□□□ -0.51
HSPG2-202ENST00000374676 H2AFZP0C0S5 128 aa11.84□□□□□ -0.51
HSPG2-202ENST00000374676 PDGFRAP16234 1089 aa11.84□□□□□ -0.51
HSPG2-202ENST00000374676 GDI1P31150 447 aa11.84□□□□□ -0.51
HSPG2-202ENST00000374676 RFC1P35251 1148 aaPredicted RBP11.84□□□□□ -0.51
HSPG2-202ENST00000374676 CYLC1P35663 651 aaPredicted RBP11.84□□□□□ -0.51
HSPG2-202ENST00000374676 PTPN9P43378 593 aa11.84□□□□□ -0.51
HSPG2-202ENST00000374676 GALCP54803 685 aa11.84□□□□□ -0.51
HSPG2-202ENST00000374676 TBX4P57082 545 aa11.84□□□□□ -0.51
HSPG2-202ENST00000374676 PITX1P78337 314 aaPredicted RBP11.84□□□□□ -0.51
HSPG2-202ENST00000374676 GRM2Q14416 872 aa11.84□□□□□ -0.51
HSPG2-202ENST00000374676 NUGGCQ68CJ6 796 aa11.84□□□□□ -0.51
HSPG2-202ENST00000374676 TRNP1Q6NT89 227 aa11.84□□□□□ -0.51
HSPG2-202ENST00000374676 DCUN1D2Q6PH85 259 aa11.84□□□□□ -0.51
HSPG2-202ENST00000374676 Q6ZNB5 142 aa11.84□□□□□ -0.51
HSPG2-202ENST00000374676 H2AFVQ71UI9 128 aa11.84□□□□□ -0.51
HSPG2-202ENST00000374676 BNIPLQ7Z465 357 aa11.84□□□□□ -0.51
HSPG2-202ENST00000374676 TAC4Q86UU9 113 aa11.84□□□□□ -0.51
HSPG2-202ENST00000374676 TMEM139Q8IV31 216 aa11.84□□□□□ -0.51
HSPG2-202ENST00000374676 UNC45BQ8IWX7 931 aa11.84□□□□□ -0.51
HSPG2-202ENST00000374676 UBALD2Q8IYN6 164 aa11.84□□□□□ -0.51
HSPG2-202ENST00000374676 JOSD2Q8TAC2 188 aa11.84□□□□□ -0.51
HSPG2-202ENST00000374676 RXFP2Q8WXD0 754 aa11.84□□□□□ -0.51
HSPG2-202ENST00000374676 CENPIQ92674 756 aaPredicted RBP11.84□□□□□ -0.51
HSPG2-202ENST00000374676 ANP32BQ92688 251 aaKnown RBP11.84□□□□□ -0.51
HSPG2-202ENST00000374676 WBP2Q969T9 261 aa11.84□□□□□ -0.51
HSPG2-202ENST00000374676 ZNF653Q96CK0 615 aa11.84□□□□□ -0.51
HSPG2-202ENST00000374676 BAG1Q99933 345 aaPredicted RBP11.84□□□□□ -0.51
HSPG2-202ENST00000374676 BRD9Q9H8M2 597 aa11.84□□□□□ -0.51
HSPG2-202ENST00000374676 MRPL47Q9HD33 250 aaKnown RBP11.84□□□□□ -0.51
HSPG2-202ENST00000374676 SPTLC3Q9NUV7 552 aa11.84□□□□□ -0.51
HSPG2-202ENST00000374676 INTUQ9ULD6 942 aa11.84□□□□□ -0.51
HSPG2-202ENST00000374676 DUSP12Q9UNI6 340 aa11.84□□□□□ -0.51
HSPG2-202ENST00000374676 EPN1Q9Y6I3 576 aaPredicted RBP11.84□□□□□ -0.51
HSPG2-202ENST00000374676 SCINQ9Y6U3 715 aa11.84□□□□□ -0.51
HSPG2-202ENST00000374676 VCANP13611 3396 aa11.84□□□□□ -0.51
HSPG2-202ENST00000374676 TMEM191CA6NGB0 347 aa11.83□□□□□ -0.52
HSPG2-202ENST00000374676 EIF3CLB5ME19 914 aaKnown RBP11.83□□□□□ -0.52
HSPG2-202ENST00000374676 M0QYT0 321 aa11.83□□□□□ -0.52
HSPG2-202ENST00000374676 ARNTLO00327 626 aa11.83□□□□□ -0.52
HSPG2-202ENST00000374676 MSI1O43347 362 aaKnown RBP11.83□□□□□ -0.52
HSPG2-202ENST00000374676 GJB6O95452 261 aa11.83□□□□□ -0.52
HSPG2-202ENST00000374676 LATS1O95835 1130 aa11.83□□□□□ -0.52
HSPG2-202ENST00000374676 KLKB1P03952 638 aa11.83□□□□□ -0.52
HSPG2-202ENST00000374676 CYP1A2P05177 515 aa11.83□□□□□ -0.52
HSPG2-202ENST00000374676 TMEM253P0C7T8 217 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms