RNA–Protein interactions for RNA: ENST00000312547.6

CHMP2A-201, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-201ENST00000312547 ZNF564Q8TBZ8 553 aaPredicted RBP13.2□□□□□ -0.3
CHMP2A-201ENST00000312547 USP13Q92995 863 aaPredicted RBP13.2□□□□□ -0.3
CHMP2A-201ENST00000312547 PGAP3Q96FM1 320 aaPredicted RBP13.2□□□□□ -0.3
CHMP2A-201ENST00000312547 ASB16Q96NS5 453 aa13.2□□□□□ -0.3
CHMP2A-201ENST00000312547 CNPY3Q9BT09 278 aa13.2□□□□□ -0.3
CHMP2A-201ENST00000312547 PHF7Q9BWX1 381 aaPredicted RBP13.2□□□□□ -0.3
CHMP2A-201ENST00000312547 KLF16Q9BXK1 252 aaPredicted RBP13.2□□□□□ -0.3
CHMP2A-201ENST00000312547 OSGEPQ9NPF4 335 aa13.2□□□□□ -0.3
CHMP2A-201ENST00000312547 CALCOCO1Q9P1Z2 691 aa13.2□□□□□ -0.3
CHMP2A-201ENST00000312547 CTTNBP2NLQ9P2B4 639 aa13.2□□□□□ -0.3
CHMP2A-201ENST00000312547 THEGQ9P2T0 379 aa13.2□□□□□ -0.3
CHMP2A-201ENST00000312547 EPS15L1Q9UBC2 864 aa13.2□□□□□ -0.3
CHMP2A-201ENST00000312547 STAP1Q9ULZ2 295 aa13.2□□□□□ -0.3
CHMP2A-201ENST00000312547 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.2□□□□□ -0.3
CHMP2A-201ENST00000312547 DOCK6Q96HP0 2047 aa13.2□□□□□ -0.3
CHMP2A-201ENST00000312547 ZNF638Q14966 1978 aaKnown RBP13.2□□□□□ -0.3
CHMP2A-201ENST00000312547 DENND4AQ7Z401 1863 aa13.19□□□□□ -0.3
CHMP2A-201ENST00000312547 IRAK2O43187 625 aa13.19□□□□□ -0.3
CHMP2A-201ENST00000312547 PRAMEF12O95522 483 aa13.19□□□□□ -0.3
CHMP2A-201ENST00000312547 IGLV3-27P01718 113 aa13.19□□□□□ -0.3
CHMP2A-201ENST00000312547 CKMP06732 381 aa13.19□□□□□ -0.3
CHMP2A-201ENST00000312547 TCF3P15923 654 aa13.19□□□□□ -0.3
CHMP2A-201ENST00000312547 FCARP24071 287 aa13.19□□□□□ -0.3
CHMP2A-201ENST00000312547 AVPR1AP37288 418 aa13.19□□□□□ -0.3
CHMP2A-201ENST00000312547 SULT1E1P49888 294 aa13.19□□□□□ -0.3
CHMP2A-201ENST00000312547 TRIP4Q15650 581 aaPredicted RBP13.19□□□□□ -0.3
CHMP2A-201ENST00000312547 STRADAQ7RTN6 431 aa13.19□□□□□ -0.3
CHMP2A-201ENST00000312547 ARID3BQ8IVW6 561 aaPredicted RBP13.19□□□□□ -0.3
CHMP2A-201ENST00000312547 TXLNBQ8N3L3 684 aa13.19□□□□□ -0.3
CHMP2A-201ENST00000312547 NIPA2Q8N8Q9 360 aa13.19□□□□□ -0.3
CHMP2A-201ENST00000312547 ADAM32Q8TC27 787 aa13.19□□□□□ -0.3
CHMP2A-201ENST00000312547 ADAMTS19Q8TE59 1207 aa13.19□□□□□ -0.3
CHMP2A-201ENST00000312547 SMARCD2Q92925 531 aa13.19□□□□□ -0.3
CHMP2A-201ENST00000312547 SLC39A13Q96H72 371 aa13.19□□□□□ -0.3
CHMP2A-201ENST00000312547 CFAP57Q96MR6 1250 aa13.19□□□□□ -0.3
CHMP2A-201ENST00000312547 SERPINB11Q96P15 392 aa13.19□□□□□ -0.3
CHMP2A-201ENST00000312547 TBCBQ99426 244 aa13.19□□□□□ -0.3
CHMP2A-201ENST00000312547 SLITRK6Q9H5Y7 841 aa13.19□□□□□ -0.3
CHMP2A-201ENST00000312547 TMEM51Q9NW97 253 aa13.19□□□□□ -0.3
CHMP2A-201ENST00000312547 SFMBT1Q9UHJ3 866 aa13.19□□□□□ -0.3
CHMP2A-201ENST00000312547 RASAL2Q9UJF2 1139 aa13.19□□□□□ -0.3
CHMP2A-201ENST00000312547 SALL4Q9UJQ4 1053 aa13.19□□□□□ -0.3
CHMP2A-201ENST00000312547 ANAPC7Q9UJX3 599 aa13.19□□□□□ -0.3
CHMP2A-201ENST00000312547 PYCARDQ9ULZ3 195 aa13.19□□□□□ -0.3
CHMP2A-201ENST00000312547 PPP2R2CQ9Y2T4 447 aa13.19□□□□□ -0.3
CHMP2A-201ENST00000312547 HBS1LQ9Y450 684 aaKnown RBP13.19□□□□□ -0.3
CHMP2A-201ENST00000312547 CPQQ9Y646 472 aa13.19□□□□□ -0.3
CHMP2A-201ENST00000312547 DUSP10Q9Y6W6 482 aa13.19□□□□□ -0.3
CHMP2A-201ENST00000312547 SLC12A8A0AV02 714 aa13.18□□□□□ -0.3
CHMP2A-201ENST00000312547 M0QYT0 321 aa13.18□□□□□ -0.3
CHMP2A-201ENST00000312547 CCP110O43303 1012 aa13.18□□□□□ -0.3
CHMP2A-201ENST00000312547 MSI1O43347 362 aaKnown RBP13.18□□□□□ -0.3
CHMP2A-201ENST00000312547 GREM1O60565 184 aa13.18□□□□□ -0.3
CHMP2A-201ENST00000312547 MBL2P11226 248 aaPredicted RBP13.18□□□□□ -0.3
CHMP2A-201ENST00000312547 PSMA2P25787 234 aa13.18□□□□□ -0.3
CHMP2A-201ENST00000312547 GBP2P32456 591 aaPredicted RBP13.18□□□□□ -0.3
CHMP2A-201ENST00000312547 KPNA1P52294 538 aaPredicted RBP13.18□□□□□ -0.3
CHMP2A-201ENST00000312547 HDAC4P56524 1084 aa13.18□□□□□ -0.3
CHMP2A-201ENST00000312547 COG7P83436 770 aa13.18□□□□□ -0.3
CHMP2A-201ENST00000312547 KIF5AQ12840 1032 aa13.18□□□□□ -0.3
CHMP2A-201ENST00000312547 C15orf59Q2T9L4 293 aaPredicted RBP13.18□□□□□ -0.3
CHMP2A-201ENST00000312547 RAB6CQ53S08 254 aa13.18□□□□□ -0.3
CHMP2A-201ENST00000312547 HS1BP3Q53T59 392 aa13.18□□□□□ -0.3
CHMP2A-201ENST00000312547 SH3PXD2AQ5TCZ1 1133 aa13.18□□□□□ -0.3
CHMP2A-201ENST00000312547 MIB1Q86YT6 1006 aa13.18□□□□□ -0.3
CHMP2A-201ENST00000312547 ARFGAP1Q8N6T3 406 aa13.18□□□□□ -0.3
CHMP2A-201ENST00000312547 RIN3Q8TB24 985 aa13.18□□□□□ -0.3
CHMP2A-201ENST00000312547 RSPRY1Q96DX4 576 aa13.18□□□□□ -0.3
CHMP2A-201ENST00000312547 LRRC3BQ96PB8 259 aa13.18□□□□□ -0.3
CHMP2A-201ENST00000312547 NACA2Q9H009 215 aa13.18□□□□□ -0.3
CHMP2A-201ENST00000312547 RAB6CQ9H0N0 254 aa13.18□□□□□ -0.3
CHMP2A-201ENST00000312547 SMG9Q9H0W8 520 aaKnown RBP13.18□□□□□ -0.3
CHMP2A-201ENST00000312547 FAM204AQ9H8W3 233 aa13.18□□□□□ -0.3
CHMP2A-201ENST00000312547 KIF9Q9HAQ2 790 aa13.18□□□□□ -0.3
CHMP2A-201ENST00000312547 GKN1Q9NS71 199 aa13.18□□□□□ -0.3
CHMP2A-201ENST00000312547 PIGVQ9NUD9 493 aa13.18□□□□□ -0.3
CHMP2A-201ENST00000312547 TDP1Q9NUW8 608 aa13.18□□□□□ -0.3
CHMP2A-201ENST00000312547 DDIT4Q9NX09 232 aa13.18□□□□□ -0.3
CHMP2A-201ENST00000312547 SMPD4Q9NXE4 827 aa13.18□□□□□ -0.3
CHMP2A-201ENST00000312547 OBP2AQ9NY56 170 aa13.18□□□□□ -0.3
CHMP2A-201ENST00000312547 TRIM10Q9UDY6 481 aa13.18□□□□□ -0.3
CHMP2A-201ENST00000312547 IP6K2Q9UHH9 426 aa13.18□□□□□ -0.3
CHMP2A-201ENST00000312547 LCMT1Q9UIC8 334 aa13.18□□□□□ -0.3
CHMP2A-201ENST00000312547 FAM50BQ9Y247 325 aa13.18□□□□□ -0.3
CHMP2A-201ENST00000312547 CCL26Q9Y258 94 aa13.18□□□□□ -0.3
CHMP2A-201ENST00000312547 TLR6Q9Y2C9 796 aa13.18□□□□□ -0.3
CHMP2A-201ENST00000312547 MYO16Q9Y6X6 1858 aa13.18□□□□□ -0.3
CHMP2A-201ENST00000312547 OBSL1O75147 1896 aa13.17□□□□□ -0.3
CHMP2A-201ENST00000312547 C2CD4DB7Z1M9 353 aa13.17□□□□□ -0.3
CHMP2A-201ENST00000312547 ANHXE9PGG2 379 aa13.17□□□□□ -0.3
CHMP2A-201ENST00000312547 MYO1FO00160 1098 aa13.17□□□□□ -0.3
CHMP2A-201ENST00000312547 STC2O76061 302 aa13.17□□□□□ -0.3
CHMP2A-201ENST00000312547 PROSCO94903 275 aa13.17□□□□□ -0.3
CHMP2A-201ENST00000312547 F9P00740 461 aa13.17□□□□□ -0.3
CHMP2A-201ENST00000312547 IL9P15248 144 aa13.17□□□□□ -0.3
CHMP2A-201ENST00000312547 GBP1P32455 592 aa13.17□□□□□ -0.3
CHMP2A-201ENST00000312547 RDXP35241 583 aaKnown RBP13.17□□□□□ -0.3
CHMP2A-201ENST00000312547 CXCR3P49682 368 aa13.17□□□□□ -0.3
CHMP2A-201ENST00000312547 ATXN1P54253 815 aaKnown RBP13.17□□□□□ -0.3
CHMP2A-201ENST00000312547 ATP11AP98196 1134 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms