RNA–Protein interactions for RNA: ENST00000265896.9

SQLE-201, Transcript of squalene epoxidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQLE, Length 2,961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-201ENST00000265896 GOLGA7BQ2TAP0 167 aa17.4■□□□□ 0.38
SQLE-201ENST00000265896 CATSPERGQ6ZRH7 1159 aa17.4■□□□□ 0.38
SQLE-201ENST00000265896 CMC1Q7Z7K0 106 aa17.4■□□□□ 0.38
SQLE-201ENST00000265896 ADAM32Q8TC27 787 aa17.4■□□□□ 0.38
SQLE-201ENST00000265896 FAM136AQ96C01 138 aa17.4■□□□□ 0.38
SQLE-201ENST00000265896 MTBPQ96DY7 904 aa17.4■□□□□ 0.38
SQLE-201ENST00000265896 PAPOLBQ9NRJ5 636 aaKnown RBP17.4■□□□□ 0.38
SQLE-201ENST00000265896 LOXHD1Q8IVV2 1947 aa17.39■□□□□ 0.38
SQLE-201ENST00000265896 TXNDC9O14530 226 aa17.39■□□□□ 0.37
SQLE-201ENST00000265896 ADCY6O43306 1168 aa17.39■□□□□ 0.37
SQLE-201ENST00000265896 ACADSP16219 412 aa17.39■□□□□ 0.37
SQLE-201ENST00000265896 SLC18A2Q05940 514 aa17.39■□□□□ 0.37
SQLE-201ENST00000265896 BIRC2Q13490 618 aa17.39■□□□□ 0.37
SQLE-201ENST00000265896 FASTKD1Q53R41 847 aaKnown RBP17.39■□□□□ 0.37
SQLE-201ENST00000265896 GADL1Q6ZQY3 521 aa17.39■□□□□ 0.37
SQLE-201ENST00000265896 DEFB132Q7Z7B7 95 aa17.39■□□□□ 0.37
SQLE-201ENST00000265896 CRLF3Q8IUI8 442 aa17.39■□□□□ 0.37
SQLE-201ENST00000265896 SEPT1Q8WYJ6 367 aa17.39■□□□□ 0.37
SQLE-201ENST00000265896 SPATA33Q96N06 139 aa17.39■□□□□ 0.37
SQLE-201ENST00000265896 ZNF518BQ9C0D4 1074 aa17.39■□□□□ 0.37
SQLE-201ENST00000265896 ZBTB42B2RXF5 422 aa17.39■□□□□ 0.37
SQLE-201ENST00000265896 PPP1R12AO14974 1030 aaPredicted RBP17.39■□□□□ 0.37
SQLE-201ENST00000265896 SKIP12755 728 aa17.39■□□□□ 0.37
SQLE-201ENST00000265896 ADORA2BP29275 332 aa17.39■□□□□ 0.37
SQLE-201ENST00000265896 TAP1Q03518 808 aa17.39■□□□□ 0.37
SQLE-201ENST00000265896 USP4Q13107 963 aa17.39■□□□□ 0.37
SQLE-201ENST00000265896 ZPBP2Q6X784 338 aa17.39■□□□□ 0.37
SQLE-201ENST00000265896 SESTD1Q86VW0 696 aa17.39■□□□□ 0.37
SQLE-201ENST00000265896 RNF148Q8N7C7 305 aa17.39■□□□□ 0.37
SQLE-201ENST00000265896 TRPM4Q8TD43 1214 aa17.39■□□□□ 0.37
SQLE-201ENST00000265896 ALKBH8Q96BT7 664 aaKnown RBP17.39■□□□□ 0.37
SQLE-201ENST00000265896 ZNF778Q96MU6 729 aa17.39■□□□□ 0.37
SQLE-201ENST00000265896 TUBGCP5Q96RT8 1024 aa17.39■□□□□ 0.37
SQLE-201ENST00000265896 SCOCQ9UIL1 159 aa17.39■□□□□ 0.37
SQLE-201ENST00000265896 SNX9Q9Y5X1 595 aa17.39■□□□□ 0.37
SQLE-201ENST00000265896 WDR81Q562E7 1941 aa17.39■□□□□ 0.37
SQLE-201ENST00000265896 SPECC1L-ADORA2AF8WAN1 911 aa17.38■□□□□ 0.37
SQLE-201ENST00000265896 APOL1O14791 398 aa17.38■□□□□ 0.37
SQLE-201ENST00000265896 MED7O43513 233 aa17.38■□□□□ 0.37
SQLE-201ENST00000265896 C1QAP02745 245 aa17.38■□□□□ 0.37
SQLE-201ENST00000265896 MLH1P40692 756 aa17.38■□□□□ 0.37
SQLE-201ENST00000265896 ZNF143P52747 638 aaPredicted RBP17.38■□□□□ 0.37
SQLE-201ENST00000265896 STX3Q13277 289 aa17.38■□□□□ 0.37
SQLE-201ENST00000265896 NIFKQ9BYG3 293 aaKnown RBP17.38■□□□□ 0.37
SQLE-201ENST00000265896 TMEM134Q9H6X4 195 aa17.38■□□□□ 0.37
SQLE-201ENST00000265896 AKT3Q9Y243 479 aa17.38■□□□□ 0.37
SQLE-201ENST00000265896 BRWD3Q6RI45 1802 aa17.38■□□□□ 0.37
SQLE-201ENST00000265896 GOLGA8QA0A0J9YX86 632 aa17.38■□□□□ 0.37
SQLE-201ENST00000265896 GOLGA8OA6NCC3 632 aa17.38■□□□□ 0.37
SQLE-201ENST00000265896 C2CD4BA6NLJ0 364 aa17.38■□□□□ 0.37
SQLE-201ENST00000265896 GOLGA8NF8WBI6 632 aa17.38■□□□□ 0.37
SQLE-201ENST00000265896 PROCP04070 461 aa17.38■□□□□ 0.37
SQLE-201ENST00000265896 ERVK-10P10266 1014 aa17.38■□□□□ 0.37
SQLE-201ENST00000265896 ANPEPP15144 967 aa17.38■□□□□ 0.37
SQLE-201ENST00000265896 ARRB2P32121 409 aa17.38■□□□□ 0.37
SQLE-201ENST00000265896 MRPS35P82673 323 aaKnown RBP17.38■□□□□ 0.37
SQLE-201ENST00000265896 N4BP2L1Q5TBK1 243 aaPredicted RBP17.38■□□□□ 0.37
SQLE-201ENST00000265896 KCNT2Q6UVM3 1135 aa17.38■□□□□ 0.37
SQLE-201ENST00000265896 FAM131BQ86XD5 332 aa17.38■□□□□ 0.37
SQLE-201ENST00000265896 STKLD1Q8NE28 680 aa17.38■□□□□ 0.37
SQLE-201ENST00000265896 APOL2Q9BQE5 337 aa17.38■□□□□ 0.37
SQLE-201ENST00000265896 DPEP3Q9H4B8 488 aa17.38■□□□□ 0.37
SQLE-201ENST00000265896 PCDH18Q9HCL0 1135 aa17.38■□□□□ 0.37
SQLE-201ENST00000265896 CILPO75339 1184 aa17.37■□□□□ 0.37
SQLE-201ENST00000265896 APOEP02649 317 aa17.37■□□□□ 0.37
SQLE-201ENST00000265896 CCR10P46092 362 aa17.37■□□□□ 0.37
SQLE-201ENST00000265896 XRRA1Q6P2D8 792 aa17.37■□□□□ 0.37
SQLE-201ENST00000265896 MOB2Q70IA6 237 aa17.37■□□□□ 0.37
SQLE-201ENST00000265896 MRPL45Q9BRJ2 306 aaKnown RBP17.37■□□□□ 0.37
SQLE-201ENST00000265896 KLC2Q9H0B6 622 aa17.37■□□□□ 0.37
SQLE-201ENST00000265896 HBS1LQ9Y450 684 aaKnown RBP17.37■□□□□ 0.37
SQLE-201ENST00000265896 TPP1O14773 563 aa17.37■□□□□ 0.37
SQLE-201ENST00000265896 NPTXRO95502 500 aa17.37■□□□□ 0.37
SQLE-201ENST00000265896 CDH5P33151 784 aaPredicted RBP17.37■□□□□ 0.37
SQLE-201ENST00000265896 PTPN7P35236 360 aa17.37■□□□□ 0.37
SQLE-201ENST00000265896 DPY19L2Q6NUT2 758 aa17.37■□□□□ 0.37
SQLE-201ENST00000265896 SLC30A9Q6PML9 568 aa17.37■□□□□ 0.37
SQLE-201ENST00000265896 ZNF184Q99676 751 aaPredicted RBP17.37■□□□□ 0.37
SQLE-201ENST00000265896 EBF3Q9H4W6 596 aa17.37■□□□□ 0.37
SQLE-201ENST00000265896 CAB39LQ9H9S4 337 aa17.37■□□□□ 0.37
SQLE-201ENST00000265896 XAB2Q9HCS7 855 aaKnown RBP17.37■□□□□ 0.37
SQLE-201ENST00000265896 CPSF2Q9P2I0 782 aaKnown RBP17.37■□□□□ 0.37
SQLE-201ENST00000265896 LRCH1Q9Y2L9 728 aa17.37■□□□□ 0.37
SQLE-201ENST00000265896 COL11A1P12107 1806 aaPredicted RBP17.37■□□□□ 0.37
SQLE-201ENST00000265896 E9PBE3 544 aa17.37■□□□□ 0.37
SQLE-201ENST00000265896 NEMP1O14524 444 aa17.37■□□□□ 0.37
SQLE-201ENST00000265896 KLHL41O60662 606 aa17.37■□□□□ 0.37
SQLE-201ENST00000265896 DGKIO75912 1065 aa17.37■□□□□ 0.37
SQLE-201ENST00000265896 CYP2F1P24903 491 aa17.37■□□□□ 0.37
SQLE-201ENST00000265896 STIP1P31948 543 aaKnown RBP17.37■□□□□ 0.37
SQLE-201ENST00000265896 PITX1P78337 314 aaPredicted RBP17.37■□□□□ 0.37
SQLE-201ENST00000265896 DLG2Q15700 870 aa17.37■□□□□ 0.37
SQLE-201ENST00000265896 OR52E8Q6IFG1 317 aa17.37■□□□□ 0.37
SQLE-201ENST00000265896 CCNYQ8ND76 341 aa17.37■□□□□ 0.37
SQLE-201ENST00000265896 CNPY3Q9BT09 278 aa17.37■□□□□ 0.37
SQLE-201ENST00000265896 STK32BQ9NY57 414 aa17.37■□□□□ 0.37
SQLE-201ENST00000265896 GGA3Q9NZ52 723 aa17.37■□□□□ 0.37
SQLE-201ENST00000265896 ZNF646O15015 1829 aaPredicted RBP17.36■□□□□ 0.37
SQLE-201ENST00000265896 EVPLQ92817 2033 aa17.36■□□□□ 0.37
SQLE-201ENST00000265896 CIB2O75838 187 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms