RNA–Protein interactions for RNA: ENST00000254719.9

RPA1-201, Transcript of replication protein A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPA1, Length 4,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-201ENST00000254719 UBA3Q8TBC4 463 aa9.53□□□□□ -0.88
RPA1-201ENST00000254719 ZNF483Q8TF39 744 aaPredicted RBP9.53□□□□□ -0.88
RPA1-201ENST00000254719 ARNTL2Q8WYA1 636 aa9.53□□□□□ -0.88
RPA1-201ENST00000254719 POPDC2Q9HBU9 364 aa9.53□□□□□ -0.88
RPA1-201ENST00000254719 PFDN4Q9NQP4 134 aa9.53□□□□□ -0.88
RPA1-201ENST00000254719 GNEQ9Y223 722 aaKnown RBP9.53□□□□□ -0.88
RPA1-201ENST00000254719 MAD1L1Q9Y6D9 718 aa9.53□□□□□ -0.88
RPA1-201ENST00000254719 RFPL1O75677 317 aa9.53□□□□□ -0.88
RPA1-201ENST00000254719 MAP3K6O95382 1288 aa9.53□□□□□ -0.88
RPA1-201ENST00000254719 STAU1O95793 577 aaKnown RBP9.53□□□□□ -0.88
RPA1-201ENST00000254719 GCLCP48506 637 aaPredicted RBP9.53□□□□□ -0.88
RPA1-201ENST00000254719 ITGA7Q13683 1181 aa9.53□□□□□ -0.88
RPA1-201ENST00000254719 MAP7Q14244 749 aa9.53□□□□□ -0.88
RPA1-201ENST00000254719 FAM47CQ5HY64 1035 aa9.53□□□□□ -0.88
RPA1-201ENST00000254719 MTHFD1LQ6UB35 978 aa9.53□□□□□ -0.88
RPA1-201ENST00000254719 LONP2Q86WA8 852 aa9.53□□□□□ -0.88
RPA1-201ENST00000254719 CDKL3Q8IVW4 592 aaPredicted RBP9.53□□□□□ -0.88
RPA1-201ENST00000254719 PYROXD2Q8N2H3 581 aa9.53□□□□□ -0.88
RPA1-201ENST00000254719 OR6Y1Q8NGX8 325 aa9.53□□□□□ -0.88
RPA1-201ENST00000254719 GDAP1Q8TB36 358 aa9.53□□□□□ -0.88
RPA1-201ENST00000254719 OLFM3Q96PB7 478 aa9.53□□□□□ -0.88
RPA1-201ENST00000254719 SLC4A5Q9BY07 1137 aa9.53□□□□□ -0.88
RPA1-201ENST00000254719 EMCNQ9ULC0 261 aa9.53□□□□□ -0.88
RPA1-201ENST00000254719 GOLGA8MH3BSY2 632 aa9.52□□□□□ -0.88
RPA1-201ENST00000254719 SPAG7O75391 227 aa9.52□□□□□ -0.88
RPA1-201ENST00000254719 TUBP50607 506 aa9.52□□□□□ -0.88
RPA1-201ENST00000254719 COPS2P61201 443 aa9.52□□□□□ -0.88
RPA1-201ENST00000254719 PDE1BQ01064 536 aa9.52□□□□□ -0.88
RPA1-201ENST00000254719 MUM1Q2TAK8 710 aa9.52□□□□□ -0.88
RPA1-201ENST00000254719 MAVSQ7Z434 540 aa9.52□□□□□ -0.88
RPA1-201ENST00000254719 TMEM110Q86TL2 294 aa9.52□□□□□ -0.88
RPA1-201ENST00000254719 MED10Q9BTT4 135 aa9.52□□□□□ -0.88
RPA1-201ENST00000254719 Q9H521 79 aa9.52□□□□□ -0.88
RPA1-201ENST00000254719 IPO11Q9UI26 975 aaKnown RBP9.52□□□□□ -0.88
RPA1-201ENST00000254719 EFR3BQ9Y2G0 817 aa9.52□□□□□ -0.88
RPA1-201ENST00000254719 PSMC1P62191 440 aaKnown RBP9.52□□□□□ -0.89
RPA1-201ENST00000254719 ACVR2BQ13705 512 aa9.52□□□□□ -0.89
RPA1-201ENST00000254719 FASTKD5Q7L8L6 764 aaKnown RBP9.52□□□□□ -0.89
RPA1-201ENST00000254719 ANKMY2Q8IV38 441 aa9.52□□□□□ -0.89
RPA1-201ENST00000254719 BEST2Q8NFU1 509 aa9.52□□□□□ -0.89
RPA1-201ENST00000254719 RFWD2Q8NHY2 731 aa9.52□□□□□ -0.89
RPA1-201ENST00000254719 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.52□□□□□ -0.89
RPA1-201ENST00000254719 ACTL7BQ9Y614 415 aa9.52□□□□□ -0.89
RPA1-201ENST00000254719 NDST1P52848 882 aa9.52□□□□□ -0.89
RPA1-201ENST00000254719 NOMO1Q15155 1222 aa9.52□□□□□ -0.89
RPA1-201ENST00000254719 TEX44Q53QW1 395 aa9.52□□□□□ -0.89
RPA1-201ENST00000254719 LCLAT1Q6UWP7 414 aa9.52□□□□□ -0.89
RPA1-201ENST00000254719 OTOAQ7RTW8 1153 aa9.52□□□□□ -0.89
RPA1-201ENST00000254719 DPP9Q86TI2 863 aa9.52□□□□□ -0.89
RPA1-201ENST00000254719 ZNF570Q96NI8 536 aa9.52□□□□□ -0.89
RPA1-201ENST00000254719 LRRC4Q9HBW1 653 aa9.52□□□□□ -0.89
RPA1-201ENST00000254719 MBLAC1A4D2B0 266 aaPredicted RBP9.52□□□□□ -0.89
RPA1-201ENST00000254719 PPP1R12AO14974 1030 aaPredicted RBP9.52□□□□□ -0.89
RPA1-201ENST00000254719 ATP6V1G2O95670 118 aa9.52□□□□□ -0.89
RPA1-201ENST00000254719 SDC4P31431 198 aa9.52□□□□□ -0.89
RPA1-201ENST00000254719 ZNF200P98182 395 aaPredicted RBP9.52□□□□□ -0.89
RPA1-201ENST00000254719 PTPN11Q06124 597 aaPredicted RBP9.52□□□□□ -0.89
RPA1-201ENST00000254719 TRMT10BQ6PF06 316 aaKnown RBP9.52□□□□□ -0.89
RPA1-201ENST00000254719 TRPM8Q7Z2W7 1104 aa9.52□□□□□ -0.89
RPA1-201ENST00000254719 SRRM1Q8IYB3 904 aaKnown RBP9.52□□□□□ -0.89
RPA1-201ENST00000254719 NLRP4Q96MN2 994 aa9.52□□□□□ -0.89
RPA1-201ENST00000254719 SPATA33Q96N06 139 aa9.52□□□□□ -0.89
RPA1-201ENST00000254719 SMARCAD1Q9H4L7 1026 aa9.52□□□□□ -0.89
RPA1-201ENST00000254719 AP3B1O00203 1094 aa9.51□□□□□ -0.89
RPA1-201ENST00000254719 GIPC1O14908 333 aa9.51□□□□□ -0.89
RPA1-201ENST00000254719 PFDN6O15212 129 aa9.51□□□□□ -0.89
RPA1-201ENST00000254719 DLDP09622 509 aaKnown RBP9.51□□□□□ -0.89
RPA1-201ENST00000254719 GNAZP19086 355 aa9.51□□□□□ -0.89
RPA1-201ENST00000254719 L1CAMP32004 1257 aa9.51□□□□□ -0.89
RPA1-201ENST00000254719 CTCFP49711 727 aaPredicted RBP9.51□□□□□ -0.89
RPA1-201ENST00000254719 GPS1Q13098 491 aa9.51□□□□□ -0.89
RPA1-201ENST00000254719 ARL13BQ3SXY8 428 aa9.51□□□□□ -0.89
RPA1-201ENST00000254719 RNF111Q6ZNA4 994 aa9.51□□□□□ -0.89
RPA1-201ENST00000254719 CCDC33Q8N5R6 958 aa9.51□□□□□ -0.89
RPA1-201ENST00000254719 C3orf58Q8NDZ4 430 aa9.51□□□□□ -0.89
RPA1-201ENST00000254719 NLRP7Q8WX94 980 aa9.51□□□□□ -0.89
RPA1-201ENST00000254719 BRI3BPQ8WY22 251 aa9.51□□□□□ -0.89
RPA1-201ENST00000254719 TMEM176AQ96HP8 235 aa9.51□□□□□ -0.89
RPA1-201ENST00000254719 SIGLEC10Q96LC7 697 aa9.51□□□□□ -0.89
RPA1-201ENST00000254719 CYTH2Q99418 400 aa9.51□□□□□ -0.89
RPA1-201ENST00000254719 PCDH9Q9HC56 1237 aa9.51□□□□□ -0.89
RPA1-201ENST00000254719 KIAA1257Q9ULG3 409 aa9.51□□□□□ -0.89
RPA1-201ENST00000254719 USP15Q9Y4E8 981 aaPredicted RBP9.51□□□□□ -0.89
RPA1-201ENST00000254719 TCRBV9S1A1TA0A576 114 aa9.51□□□□□ -0.89
RPA1-201ENST00000254719 PIRO00625 290 aa9.51□□□□□ -0.89
RPA1-201ENST00000254719 ZNF195O14628 629 aa9.51□□□□□ -0.89
RPA1-201ENST00000254719 CST8O60676 142 aa9.51□□□□□ -0.89
RPA1-201ENST00000254719 ZNF143P52747 638 aaPredicted RBP9.51□□□□□ -0.89
RPA1-201ENST00000254719 SLC18A2Q05940 514 aa9.51□□□□□ -0.89
RPA1-201ENST00000254719 HIF1AQ16665 826 aa9.51□□□□□ -0.89
RPA1-201ENST00000254719 CAPN12Q6ZSI9 719 aa9.51□□□□□ -0.89
RPA1-201ENST00000254719 WDR75Q8IWA0 830 aaKnown RBP9.51□□□□□ -0.89
RPA1-201ENST00000254719 CCDC117Q8IWD4 279 aaPredicted RBP9.51□□□□□ -0.89
RPA1-201ENST00000254719 C4orf33Q8N1A6 199 aa9.51□□□□□ -0.89
RPA1-201ENST00000254719 CCDC185Q8N715 623 aa9.51□□□□□ -0.89
RPA1-201ENST00000254719 ACVR1CQ8NER5 493 aa9.51□□□□□ -0.89
RPA1-201ENST00000254719 PPTC7Q8NI37 304 aa9.51□□□□□ -0.89
RPA1-201ENST00000254719 USP6NLQ92738 828 aa9.51□□□□□ -0.89
RPA1-201ENST00000254719 PTCD3Q96EY7 689 aaKnown RBP9.51□□□□□ -0.89
RPA1-201ENST00000254719 TGS1Q96RS0 853 aaKnown RBP9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms