RNA–Protein interactions for RNA: ENST00000251739.9

VPS50-201, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS50, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-201ENST00000251739 C10orf76Q5T2E6 689 aa10.88□□□□□ -0.67
VPS50-201ENST00000251739 DAB2IPQ5VWQ8 1189 aa10.88□□□□□ -0.67
VPS50-201ENST00000251739 Q6ZNB5 142 aa10.88□□□□□ -0.67
VPS50-201ENST00000251739 LPCAT2Q7L5N7 544 aa10.88□□□□□ -0.67
VPS50-201ENST00000251739 TRMT11Q7Z4G4 463 aaKnown RBP10.88□□□□□ -0.67
VPS50-201ENST00000251739 SYT12Q8IV01 421 aa10.88□□□□□ -0.67
VPS50-201ENST00000251739 ZNF276Q8N554 614 aa10.88□□□□□ -0.67
VPS50-201ENST00000251739 TAS1R2Q8TE23 839 aa10.88□□□□□ -0.67
VPS50-201ENST00000251739 SPACA7Q96KW9 195 aa10.88□□□□□ -0.67
VPS50-201ENST00000251739 CYP3A43Q9HB55 503 aa10.88□□□□□ -0.67
VPS50-201ENST00000251739 TLR8Q9NR97 1041 aaKnown RBP10.88□□□□□ -0.67
VPS50-201ENST00000251739 TMEM74BQ9NUR3 256 aa10.88□□□□□ -0.67
VPS50-201ENST00000251739 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.88□□□□□ -0.67
VPS50-201ENST00000251739 CABIN1Q9Y6J0 2220 aa10.88□□□□□ -0.67
VPS50-201ENST00000251739 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.87□□□□□ -0.67
VPS50-201ENST00000251739 A0A1B0GVL5 298 aa10.87□□□□□ -0.67
VPS50-201ENST00000251739 TBC1D3BA6NDS4 549 aa10.87□□□□□ -0.67
VPS50-201ENST00000251739 IRF1P10914 325 aa10.87□□□□□ -0.67
VPS50-201ENST00000251739 CEACAM1P13688 526 aa10.87□□□□□ -0.67
VPS50-201ENST00000251739 HOXB2P14652 356 aa10.87□□□□□ -0.67
VPS50-201ENST00000251739 NTSR1P30989 418 aa10.87□□□□□ -0.67
VPS50-201ENST00000251739 PIK3CAP42336 1068 aa10.87□□□□□ -0.67
VPS50-201ENST00000251739 KIF11P52732 1056 aa10.87□□□□□ -0.67
VPS50-201ENST00000251739 ZNF252P-AS1Q0IIN9 211 aa10.87□□□□□ -0.67
VPS50-201ENST00000251739 PREPLQ4J6C6 727 aaPredicted RBP10.87□□□□□ -0.67
VPS50-201ENST00000251739 MSS51Q4VC12 460 aa10.87□□□□□ -0.67
VPS50-201ENST00000251739 TRIM61Q5EBN2 209 aa10.87□□□□□ -0.67
VPS50-201ENST00000251739 SH3PXD2AQ5TCZ1 1133 aa10.87□□□□□ -0.67
VPS50-201ENST00000251739 BTBD8Q5XKL5 378 aa10.87□□□□□ -0.67
VPS50-201ENST00000251739 EGFLAMQ63HQ2 1017 aa10.87□□□□□ -0.67
VPS50-201ENST00000251739 SLC23A3Q6PIS1 610 aa10.87□□□□□ -0.67
VPS50-201ENST00000251739 CCDC186Q7Z3E2 898 aa10.87□□□□□ -0.67
VPS50-201ENST00000251739 SCD5Q86SK9 330 aa10.87□□□□□ -0.67
VPS50-201ENST00000251739 HSCBQ8IWL3 235 aa10.87□□□□□ -0.67
VPS50-201ENST00000251739 TMEFF1Q8IYR6 380 aa10.87□□□□□ -0.67
VPS50-201ENST00000251739 NAT16Q8N8M0 369 aa10.87□□□□□ -0.67
VPS50-201ENST00000251739 PIGKQ92643 395 aa10.87□□□□□ -0.67
VPS50-201ENST00000251739 CHAMP1Q96JM3 812 aa10.87□□□□□ -0.67
VPS50-201ENST00000251739 ACOX2Q99424 681 aa10.87□□□□□ -0.67
VPS50-201ENST00000251739 GABRG3Q99928 467 aa10.87□□□□□ -0.67
VPS50-201ENST00000251739 NIF3L1Q9GZT8 377 aa10.87□□□□□ -0.67
VPS50-201ENST00000251739 CALCOCO1Q9P1Z2 691 aa10.87□□□□□ -0.67
VPS50-201ENST00000251739 FBXO10Q9UK96 956 aa10.87□□□□□ -0.67
VPS50-201ENST00000251739 PILRBQ9UKJ0 227 aa10.87□□□□□ -0.67
VPS50-201ENST00000251739 ZDHHC9Q9Y397 364 aa10.87□□□□□ -0.67
VPS50-201ENST00000251739 PCDHA5Q9Y5H7 936 aa10.87□□□□□ -0.67
VPS50-201ENST00000251739 USP3Q9Y6I4 520 aa10.87□□□□□ -0.67
VPS50-201ENST00000251739 NUMA1Q14980 2115 aa10.87□□□□□ -0.67
VPS50-201ENST00000251739 A0A1W2PQH9 124 aa10.86□□□□□ -0.67
VPS50-201ENST00000251739 UPK3BL1B0FP48 263 aa10.86□□□□□ -0.67
VPS50-201ENST00000251739 PRRT4C9JH25 899 aa10.86□□□□□ -0.67
VPS50-201ENST00000251739 UPK3BL2E5RIL1 263 aa10.86□□□□□ -0.67
VPS50-201ENST00000251739 PENKP01210 267 aaPredicted RBP10.86□□□□□ -0.67
VPS50-201ENST00000251739 CISD3P0C7P0 127 aa10.86□□□□□ -0.67
VPS50-201ENST00000251739 TRIM49P0CI25 452 aa10.86□□□□□ -0.67
VPS50-201ENST00000251739 TRIM49CP0CI26 452 aa10.86□□□□□ -0.67
VPS50-201ENST00000251739 TYRP14679 529 aa10.86□□□□□ -0.67
VPS50-201ENST00000251739 ITPKAP23677 461 aa10.86□□□□□ -0.67
VPS50-201ENST00000251739 NR2F2P24468 414 aa10.86□□□□□ -0.67
VPS50-201ENST00000251739 ADORA2BP29275 332 aa10.86□□□□□ -0.67
VPS50-201ENST00000251739 ATP5C1P36542 298 aaKnown RBP10.86□□□□□ -0.67
VPS50-201ENST00000251739 DPP6P42658 865 aa10.86□□□□□ -0.67
VPS50-201ENST00000251739 GCLMP48507 274 aa10.86□□□□□ -0.67
VPS50-201ENST00000251739 VAMP7P51809 220 aa10.86□□□□□ -0.67
VPS50-201ENST00000251739 DPYDQ12882 1025 aa10.86□□□□□ -0.67
VPS50-201ENST00000251739 LMAN2Q12907 356 aa10.86□□□□□ -0.67
VPS50-201ENST00000251739 BYSLQ13895 437 aaKnown RBP10.86□□□□□ -0.67
VPS50-201ENST00000251739 ANO4Q32M45 955 aa10.86□□□□□ -0.67
VPS50-201ENST00000251739 LYSMD4Q5XG99 296 aa10.86□□□□□ -0.67
VPS50-201ENST00000251739 CEP135Q66GS9 1140 aa10.86□□□□□ -0.67
VPS50-201ENST00000251739 GRAMD4Q6IC98 578 aa10.86□□□□□ -0.67
VPS50-201ENST00000251739 TOGARAM2Q6ZUX3 1019 aa10.86□□□□□ -0.67
VPS50-201ENST00000251739 INTS8Q75QN2 995 aaKnown RBP10.86□□□□□ -0.67
VPS50-201ENST00000251739 ARMCX6Q7L4S7 300 aa10.86□□□□□ -0.67
VPS50-201ENST00000251739 PIP4P1Q86T03 277 aa10.86□□□□□ -0.67
VPS50-201ENST00000251739 RETREG3Q86VR2 466 aa10.86□□□□□ -0.67
VPS50-201ENST00000251739 TTC30AQ86WT1 665 aa10.86□□□□□ -0.67
VPS50-201ENST00000251739 GUF1Q8N442 669 aaKnown RBP10.86□□□□□ -0.67
VPS50-201ENST00000251739 USB1Q9BQ65 265 aaKnown RBP10.86□□□□□ -0.67
VPS50-201ENST00000251739 BBS2Q9BXC9 721 aa10.86□□□□□ -0.67
VPS50-201ENST00000251739 NT5C1AQ9BXI3 368 aa10.86□□□□□ -0.67
VPS50-201ENST00000251739 CAPN10Q9HC96 672 aa10.86□□□□□ -0.67
VPS50-201ENST00000251739 DNAJC17Q9NVM6 304 aaKnown RBP10.86□□□□□ -0.67
VPS50-201ENST00000251739 CLIC5Q9NZA1 410 aa10.86□□□□□ -0.67
VPS50-201ENST00000251739 BCCIPQ9P287 314 aaKnown RBP eCLIP10.86□□□□□ -0.67
VPS50-201ENST00000251739 WDR35Q9P2L0 1181 aa10.86□□□□□ -0.67
VPS50-201ENST00000251739 FRMD4BQ9Y2L6 1034 aa10.86□□□□□ -0.67
VPS50-201ENST00000251739 APC2O95996 2303 aa10.85□□□□□ -0.67
VPS50-201ENST00000251739 ACACAQ13085 2346 aa10.85□□□□□ -0.67
VPS50-201ENST00000251739 IGHV1OR15-9A0A0B4J2B8 117 aa10.85□□□□□ -0.67
VPS50-201ENST00000251739 NEDD8-MDP1E9PL57 170 aa10.85□□□□□ -0.67
VPS50-201ENST00000251739 MDM4O15151 490 aa10.85□□□□□ -0.67
VPS50-201ENST00000251739 CALUO43852 315 aaPredicted RBP10.85□□□□□ -0.67
VPS50-201ENST00000251739 STC2O76061 302 aa10.85□□□□□ -0.67
VPS50-201ENST00000251739 KLKB1P03952 638 aa10.85□□□□□ -0.67
VPS50-201ENST00000251739 PROS1P07225 676 aa10.85□□□□□ -0.67
VPS50-201ENST00000251739 RARGP13631 454 aa10.85□□□□□ -0.67
VPS50-201ENST00000251739 ENGP17813 658 aa10.85□□□□□ -0.67
VPS50-201ENST00000251739 ACO1P21399 889 aaKnown RBP10.85□□□□□ -0.67
VPS50-201ENST00000251739 NDUFA8P51970 172 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms