RNA–Protein interactions for RNA: ENST00000221232.9

CNOT3-201, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 2,852 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-201ENST00000221232 C2CD2Q9Y426 696 aa15.15■□□□□ 0.02
CNOT3-201ENST00000221232 KRT37O76014 449 aa15.14■□□□□ 0.01
CNOT3-201ENST00000221232 PRKD1Q15139 912 aaPredicted RBP15.14■□□□□ 0.01
CNOT3-201ENST00000221232 CTC1Q2NKJ3 1217 aa15.14■□□□□ 0.01
CNOT3-201ENST00000221232 DSTYKQ6XUX3 929 aa15.14■□□□□ 0.01
CNOT3-201ENST00000221232 CCNYQ8ND76 341 aa15.14■□□□□ 0.01
CNOT3-201ENST00000221232 SLC2A14Q8TDB8 520 aa15.14■□□□□ 0.01
CNOT3-201ENST00000221232 KCTD15Q96SI1 283 aaPredicted RBP15.14■□□□□ 0.01
CNOT3-201ENST00000221232 TBCBQ99426 244 aa15.14■□□□□ 0.01
CNOT3-201ENST00000221232 NFKBIZQ9BYH8 718 aa15.14■□□□□ 0.01
CNOT3-201ENST00000221232 YY1AP1Q9H869 796 aa15.14■□□□□ 0.01
CNOT3-201ENST00000221232 WDR27A2RRH5 827 aa15.14■□□□□ 0.01
CNOT3-201ENST00000221232 SPTLC1O15269 473 aa15.14■□□□□ 0.01
CNOT3-201ENST00000221232 CREB3O43889 395 aa15.14■□□□□ 0.01
CNOT3-201ENST00000221232 PEX11AO75192 247 aa15.14■□□□□ 0.01
CNOT3-201ENST00000221232 ACAT1P24752 427 aaKnown RBP15.14■□□□□ 0.01
CNOT3-201ENST00000221232 PTPN4P29074 926 aa15.14■□□□□ 0.01
CNOT3-201ENST00000221232 MRPS5P82675 430 aaKnown RBP15.14■□□□□ 0.01
CNOT3-201ENST00000221232 RCN2Q14257 317 aa15.14■□□□□ 0.01
CNOT3-201ENST00000221232 RINLQ6ZS11 566 aa15.14■□□□□ 0.01
CNOT3-201ENST00000221232 DEPDC1BQ8WUY9 529 aa15.14■□□□□ 0.01
CNOT3-201ENST00000221232 SLC4A5Q9BY07 1137 aa15.14■□□□□ 0.01
CNOT3-201ENST00000221232 CADM1Q9BY67 442 aaKnown RBP15.14■□□□□ 0.01
CNOT3-201ENST00000221232 SSU72Q9NP77 194 aaKnown RBP15.14■□□□□ 0.01
CNOT3-201ENST00000221232 FETUBQ9UGM5 382 aa15.14■□□□□ 0.01
CNOT3-201ENST00000221232 GYG2O15488 501 aa15.14■□□□□ 0.01
CNOT3-201ENST00000221232 APOEP02649 317 aa15.14■□□□□ 0.01
CNOT3-201ENST00000221232 DLDP09622 509 aaKnown RBP15.14■□□□□ 0.01
CNOT3-201ENST00000221232 SMPD1P17405 629 aa15.14■□□□□ 0.01
CNOT3-201ENST00000221232 GNL1P36915 607 aaPredicted RBP15.14■□□□□ 0.01
CNOT3-201ENST00000221232 RASSF2P50749 326 aa15.14■□□□□ 0.01
CNOT3-201ENST00000221232 SLC18A2Q05940 514 aa15.14■□□□□ 0.01
CNOT3-201ENST00000221232 AP1B1Q10567 949 aa15.14■□□□□ 0.01
CNOT3-201ENST00000221232 BST1Q10588 318 aa15.14■□□□□ 0.01
CNOT3-201ENST00000221232 NME3Q13232 169 aa15.14■□□□□ 0.01
CNOT3-201ENST00000221232 KHDC1Q4VXA5 237 aaKnown RBP15.14■□□□□ 0.01
CNOT3-201ENST00000221232 TMEM110Q86TL2 294 aa15.14■□□□□ 0.01
CNOT3-201ENST00000221232 NUDCD3Q8IVD9 361 aa15.14■□□□□ 0.01
CNOT3-201ENST00000221232 LINC01465Q8N7H1 131 aa15.14■□□□□ 0.01
CNOT3-201ENST00000221232 PDCD7Q8N8D1 485 aaKnown RBP15.14■□□□□ 0.01
CNOT3-201ENST00000221232 GPRC5AQ8NFJ5 357 aa15.14■□□□□ 0.01
CNOT3-201ENST00000221232 DTX3LQ8TDB6 740 aa15.14■□□□□ 0.01
CNOT3-201ENST00000221232 C20orf27Q9GZN8 174 aa15.14■□□□□ 0.01
CNOT3-201ENST00000221232 NMUR2Q9GZQ4 415 aa15.14■□□□□ 0.01
CNOT3-201ENST00000221232 RFPL1O75677 317 aa15.13■□□□□ 0.01
CNOT3-201ENST00000221232 RECQL4O94761 1208 aa15.13■□□□□ 0.01
CNOT3-201ENST00000221232 C1QAP02745 245 aa15.13■□□□□ 0.01
CNOT3-201ENST00000221232 TGM2P21980 687 aa15.13■□□□□ 0.01
CNOT3-201ENST00000221232 NDUFV1P49821 464 aa15.13■□□□□ 0.01
CNOT3-201ENST00000221232 GTF2A2P52657 109 aa15.13■□□□□ 0.01
CNOT3-201ENST00000221232 TAF11Q15544 211 aa15.13■□□□□ 0.01
CNOT3-201ENST00000221232 PKDCCQ504Y2 493 aa15.13■□□□□ 0.01
CNOT3-201ENST00000221232 DCAF6Q58WW2 860 aa15.13■□□□□ 0.01
CNOT3-201ENST00000221232 HEATR6Q6AI08 1181 aaKnown RBP15.13■□□□□ 0.01
CNOT3-201ENST00000221232 SLC9A4Q6AI14 798 aa15.13■□□□□ 0.01
CNOT3-201ENST00000221232 FASTKD5Q7L8L6 764 aaKnown RBP15.13■□□□□ 0.01
CNOT3-201ENST00000221232 NME8Q8N427 588 aa15.13■□□□□ 0.01
CNOT3-201ENST00000221232 PPTC7Q8NI37 304 aa15.13■□□□□ 0.01
CNOT3-201ENST00000221232 ADAM32Q8TC27 787 aa15.13■□□□□ 0.01
CNOT3-201ENST00000221232 ATXN7L3BQ96GX2 97 aa15.13■□□□□ 0.01
CNOT3-201ENST00000221232 SGIP1Q9BQI5 828 aa15.13■□□□□ 0.01
CNOT3-201ENST00000221232 KIAA1257Q9ULG3 409 aa15.13■□□□□ 0.01
CNOT3-201ENST00000221232 SCN1AP35498 2009 aa15.13■□□□□ 0.01
CNOT3-201ENST00000221232 DYNC1LI2O43237 492 aaPredicted RBP15.13■□□□□ 0.01
CNOT3-201ENST00000221232 SNAI1O95863 264 aaPredicted RBP15.13■□□□□ 0.01
CNOT3-201ENST00000221232 ENO1P06733 434 aaKnown RBP15.13■□□□□ 0.01
CNOT3-201ENST00000221232 ESRRAP11474 423 aaPredicted RBP15.13■□□□□ 0.01
CNOT3-201ENST00000221232 PPIL2Q13356 520 aa15.13■□□□□ 0.01
CNOT3-201ENST00000221232 PARP6Q2NL67 630 aa15.13■□□□□ 0.01
CNOT3-201ENST00000221232 CTU1Q7Z7A3 348 aaKnown RBP15.13■□□□□ 0.01
CNOT3-201ENST00000221232 OR6J1Q8NGC5 347 aa15.13■□□□□ 0.01
CNOT3-201ENST00000221232 SLC10A4Q96EP9 437 aa15.13■□□□□ 0.01
CNOT3-201ENST00000221232 SIGLEC10Q96LC7 697 aa15.13■□□□□ 0.01
CNOT3-201ENST00000221232 CSPG4P5Q96PW8 444 aa15.13■□□□□ 0.01
CNOT3-201ENST00000221232 PPARGC1AQ9UBK2 798 aaKnown RBP15.13■□□□□ 0.01
CNOT3-201ENST00000221232 KCNH4Q9UQ05 1017 aa15.13■□□□□ 0.01
CNOT3-201ENST00000221232 PLLPQ9Y342 182 aa15.13■□□□□ 0.01
CNOT3-201ENST00000221232 MRPL42Q9Y6G3 142 aaKnown RBP15.13■□□□□ 0.01
CNOT3-201ENST00000221232 BCLAF3A2AJT9 711 aaKnown RBP15.12■□□□□ 0.01
CNOT3-201ENST00000221232 HMX2A2RU54 273 aa15.12■□□□□ 0.01
CNOT3-201ENST00000221232 FCHO1O14526 889 aa15.12■□□□□ 0.01
CNOT3-201ENST00000221232 ADCY6O43306 1168 aa15.12■□□□□ 0.01
CNOT3-201ENST00000221232 DHRS4L1P0CG22 281 aa15.12■□□□□ 0.01
CNOT3-201ENST00000221232 GRM5P41594 1212 aa15.12■□□□□ 0.01
CNOT3-201ENST00000221232 KDSRQ06136 332 aa15.12■□□□□ 0.01
CNOT3-201ENST00000221232 ZNF534Q76KX8 674 aa15.12■□□□□ 0.01
CNOT3-201ENST00000221232 FBXO27Q8NI29 283 aa15.12■□□□□ 0.01
CNOT3-201ENST00000221232 INPP5DQ92835 1189 aa15.12■□□□□ 0.01
CNOT3-201ENST00000221232 E2F7Q96AV8 911 aa15.12■□□□□ 0.01
CNOT3-201ENST00000221232 NSL1Q96IY1 281 aa15.12■□□□□ 0.01
CNOT3-201ENST00000221232 RILPQ96NA2 401 aa15.12■□□□□ 0.01
CNOT3-201ENST00000221232 AGAP3Q96P47 875 aa15.12■□□□□ 0.01
CNOT3-201ENST00000221232 RNPEPL1Q9HAU8 725 aa15.12■□□□□ 0.01
CNOT3-201ENST00000221232 MTMR10Q9NXD2 777 aa15.12■□□□□ 0.01
CNOT3-201ENST00000221232 DTLQ9NZJ0 730 aa15.12■□□□□ 0.01
CNOT3-201ENST00000221232 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.12■□□□□ 0.01
CNOT3-201ENST00000221232 SMAPO00193 183 aa15.12■□□□□ 0.01
CNOT3-201ENST00000221232 VAV1P15498 845 aa15.12■□□□□ 0.01
CNOT3-201ENST00000221232 CDK16Q00536 496 aa15.12■□□□□ 0.01
CNOT3-201ENST00000221232 ZNF792Q3KQV3 632 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms