RNA–Protein interactions for RNA: ENST00000221222.15

HOMER3-201, Transcript of homer scaffold protein 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene HOMER3, Length 1,384 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-201ENST00000221222 PSMC3P17980 439 aa24.66■■□□□ 1.54
HOMER3-201ENST00000221222 NOS2P35228 1153 aa24.66■■□□□ 1.54
HOMER3-201ENST00000221222 MATKP42679 507 aa24.66■■□□□ 1.54
HOMER3-201ENST00000221222 COG7P83436 770 aa24.66■■□□□ 1.54
HOMER3-201ENST00000221222 DCAF6Q58WW2 860 aa24.66■■□□□ 1.54
HOMER3-201ENST00000221222 PHLDB2Q86SQ0 1253 aa24.66■■□□□ 1.54
HOMER3-201ENST00000221222 MIB1Q86YT6 1006 aa24.66■■□□□ 1.54
HOMER3-201ENST00000221222 TMTC1Q8IUR5 882 aa24.66■■□□□ 1.54
HOMER3-201ENST00000221222 CCDC170Q8IYT3 715 aa24.66■■□□□ 1.54
HOMER3-201ENST00000221222 PBXIP1Q96AQ6 731 aa24.66■■□□□ 1.54
HOMER3-201ENST00000221222 METTL5Q9NRN9 209 aaKnown RBP24.66■■□□□ 1.54
HOMER3-201ENST00000221222 GKN1Q9NS71 199 aa24.66■■□□□ 1.54
HOMER3-201ENST00000221222 HBS1LQ9Y450 684 aaKnown RBP24.66■■□□□ 1.54
HOMER3-201ENST00000221222 ZDBF2Q9HCK1 2354 aa24.66■■□□□ 1.54
HOMER3-201ENST00000221222 SIGLEC16A6NMB1 481 aa24.65■■□□□ 1.54
HOMER3-201ENST00000221222 PPP1R15BQ5SWA1 713 aa24.65■■□□□ 1.54
HOMER3-201ENST00000221222 PLEKHA7Q6IQ23 1121 aa24.65■■□□□ 1.54
HOMER3-201ENST00000221222 NT5C3BQ969T7 300 aa24.65■■□□□ 1.54
HOMER3-201ENST00000221222 SERPINB11Q96P15 392 aa24.65■■□□□ 1.54
HOMER3-201ENST00000221222 RRN3Q9NYV6 651 aa24.65■■□□□ 1.54
HOMER3-201ENST00000221222 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP24.65■■□□□ 1.54
HOMER3-201ENST00000221222 CFAP97Q9P2B7 532 aa24.65■■□□□ 1.54
HOMER3-201ENST00000221222 SFMBT1Q9UHJ3 866 aa24.65■■□□□ 1.54
HOMER3-201ENST00000221222 IGLV3-25P01717 112 aa24.64■■□□□ 1.53
HOMER3-201ENST00000221222 KRT3P12035 628 aa24.64■■□□□ 1.53
HOMER3-201ENST00000221222 FLT3P36888 993 aa24.64■■□□□ 1.53
HOMER3-201ENST00000221222 KPNA1P52294 538 aaPredicted RBP24.64■■□□□ 1.53
HOMER3-201ENST00000221222 RNASE9P60153 205 aaKnown RBP24.64■■□□□ 1.53
HOMER3-201ENST00000221222 NNTQ13423 1086 aa24.64■■□□□ 1.53
HOMER3-201ENST00000221222 TDGQ13569 410 aa24.64■■□□□ 1.53
HOMER3-201ENST00000221222 MTF1Q14872 753 aa24.64■■□□□ 1.53
HOMER3-201ENST00000221222 DNAJC24Q6P3W2 148 aa24.64■■□□□ 1.53
HOMER3-201ENST00000221222 TAC4Q86UU9 113 aa24.64■■□□□ 1.53
HOMER3-201ENST00000221222 TMEM139Q8IV31 216 aa24.64■■□□□ 1.53
HOMER3-201ENST00000221222 ZNF653Q96CK0 615 aa24.64■■□□□ 1.53
HOMER3-201ENST00000221222 DDX23Q9BUQ8 820 aaKnown RBP24.64■■□□□ 1.53
HOMER3-201ENST00000221222 SELENOOQ9BVL4 669 aa24.64■■□□□ 1.53
HOMER3-201ENST00000221222 SPTLC3Q9NUV7 552 aa24.64■■□□□ 1.53
HOMER3-201ENST00000221222 PARVAQ9NVD7 372 aa24.64■■□□□ 1.53
HOMER3-201ENST00000221222 CNOT8Q9UFF9 292 aaKnown RBP24.64■■□□□ 1.53
HOMER3-201ENST00000221222 SORCS3Q9UPU3 1222 aa24.64■■□□□ 1.53
HOMER3-201ENST00000221222 SLC12A8A0AV02 714 aa24.63■■□□□ 1.53
HOMER3-201ENST00000221222 E2F8A0AVK6 867 aa24.63■■□□□ 1.53
HOMER3-201ENST00000221222 ANKRD62A6NC57 917 aa24.63■■□□□ 1.53
HOMER3-201ENST00000221222 GREM1O60565 184 aa24.63■■□□□ 1.53
HOMER3-201ENST00000221222 STC2O76061 302 aa24.63■■□□□ 1.53
HOMER3-201ENST00000221222 EIF4EBP2Q13542 120 aaPredicted RBP24.63■■□□□ 1.53
HOMER3-201ENST00000221222 TRNP1Q6NT89 227 aa24.63■■□□□ 1.53
HOMER3-201ENST00000221222 JOSD2Q8TAC2 188 aa24.63■■□□□ 1.53
HOMER3-201ENST00000221222 PLD4Q96BZ4 506 aa24.63■■□□□ 1.53
HOMER3-201ENST00000221222 NPY6RQ99463 290 aa24.63■■□□□ 1.53
HOMER3-201ENST00000221222 BAG1Q99933 345 aaPredicted RBP24.63■■□□□ 1.53
HOMER3-201ENST00000221222 TRMT61BQ9BVS5 477 aaKnown RBP24.63■■□□□ 1.53
HOMER3-201ENST00000221222 THG1LQ9NWX6 298 aaKnown RBP24.63■■□□□ 1.53
HOMER3-201ENST00000221222 STAP1Q9ULZ2 295 aa24.63■■□□□ 1.53
HOMER3-201ENST00000221222 PIEZO1Q92508 2521 aa24.62■■□□□ 1.53
HOMER3-201ENST00000221222 ZNF263O14978 683 aa24.62■■□□□ 1.53
HOMER3-201ENST00000221222 CHADO15335 359 aa24.62■■□□□ 1.53
HOMER3-201ENST00000221222 ATMINO43313 823 aaPredicted RBP24.62■■□□□ 1.53
HOMER3-201ENST00000221222 MSI1O43347 362 aaKnown RBP24.62■■□□□ 1.53
HOMER3-201ENST00000221222 LCA5LO95447 670 aa24.62■■□□□ 1.53
HOMER3-201ENST00000221222 TRUB2O95900 331 aaKnown RBP24.62■■□□□ 1.53
HOMER3-201ENST00000221222 IGLV3-27P01718 113 aa24.62■■□□□ 1.53
HOMER3-201ENST00000221222 PITX1P78337 314 aaPredicted RBP24.62■■□□□ 1.53
HOMER3-201ENST00000221222 RING1Q06587 406 aa24.62■■□□□ 1.53
HOMER3-201ENST00000221222 MAMLD1Q13495 774 aa24.62■■□□□ 1.53
HOMER3-201ENST00000221222 GRM2Q14416 872 aa24.62■■□□□ 1.53
HOMER3-201ENST00000221222 TRIP4Q15650 581 aaPredicted RBP24.62■■□□□ 1.53
HOMER3-201ENST00000221222 ARHGAP29Q52LW3 1261 aa24.62■■□□□ 1.53
HOMER3-201ENST00000221222 HTR3DQ70Z44 454 aa24.62■■□□□ 1.53
HOMER3-201ENST00000221222 ALYREFQ86V81 257 aaKnown RBP24.62■■□□□ 1.53
HOMER3-201ENST00000221222 ANP32BQ92688 251 aaKnown RBP24.62■■□□□ 1.53
HOMER3-201ENST00000221222 WBP2Q969T9 261 aa24.62■■□□□ 1.53
HOMER3-201ENST00000221222 TLR6Q9Y2C9 796 aa24.62■■□□□ 1.53
HOMER3-201ENST00000221222 SCINQ9Y6U3 715 aa24.62■■□□□ 1.53
HOMER3-201ENST00000221222 C2CD4BA6NLJ0 364 aa24.61■■□□□ 1.53
HOMER3-201ENST00000221222 IRAK2O43187 625 aa24.61■■□□□ 1.53
HOMER3-201ENST00000221222 GJB6O95452 261 aa24.61■■□□□ 1.53
HOMER3-201ENST00000221222 ABCB4P21439 1286 aa24.61■■□□□ 1.53
HOMER3-201ENST00000221222 RFC1P35251 1148 aaPredicted RBP24.61■■□□□ 1.53
HOMER3-201ENST00000221222 CYLC1P35663 651 aaPredicted RBP24.61■■□□□ 1.53
HOMER3-201ENST00000221222 GALCP54803 685 aa24.61■■□□□ 1.53
HOMER3-201ENST00000221222 SIGLEC14Q08ET2 396 aa24.61■■□□□ 1.53
HOMER3-201ENST00000221222 SLC25A52Q3SY17 297 aa24.61■■□□□ 1.53
HOMER3-201ENST00000221222 OTUD1Q5VV17 481 aaPredicted RBP24.61■■□□□ 1.53
HOMER3-201ENST00000221222 CC2D1AQ6P1N0 951 aaPredicted RBP24.61■■□□□ 1.53
HOMER3-201ENST00000221222 YAF2Q8IY57 180 aa24.61■■□□□ 1.53
HOMER3-201ENST00000221222 EMC1Q8N766 993 aa24.61■■□□□ 1.53
HOMER3-201ENST00000221222 ADAM32Q8TC27 787 aa24.61■■□□□ 1.53
HOMER3-201ENST00000221222 PGAP3Q96FM1 320 aaPredicted RBP24.61■■□□□ 1.53
HOMER3-201ENST00000221222 THAP2Q9H0W7 228 aa24.61■■□□□ 1.53
HOMER3-201ENST00000221222 SH3BP1Q9Y3L3 701 aa24.61■■□□□ 1.53
HOMER3-201ENST00000221222 WDFY4Q6ZS81 3184 aa24.61■■□□□ 1.53
HOMER3-201ENST00000221222 SOWAHDA6NJG2 315 aa24.6■■□□□ 1.53
HOMER3-201ENST00000221222 CYP1A2P05177 515 aa24.6■■□□□ 1.53
HOMER3-201ENST00000221222 H2AFZP0C0S5 128 aa24.6■■□□□ 1.53
HOMER3-201ENST00000221222 IRF1P10914 325 aa24.6■■□□□ 1.53
HOMER3-201ENST00000221222 GPC5P78333 572 aa24.6■■□□□ 1.53
HOMER3-201ENST00000221222 NHLH1Q02575 133 aa24.6■■□□□ 1.53
HOMER3-201ENST00000221222 C10orf76Q5T2E6 689 aa24.6■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms