RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 NRDE2Q9H7Z3 1164 aa13.78□□□□□ -0.2
SRP54-201ENST00000216774 GPATCH2LQ9NWQ4 482 aa13.78□□□□□ -0.2
SRP54-201ENST00000216774 PPARGC1AQ9UBK2 798 aaKnown RBP13.78□□□□□ -0.2
SRP54-201ENST00000216774 TAGLN3Q9UI15 199 aa13.78□□□□□ -0.2
SRP54-201ENST00000216774 SORCS3Q9UPU3 1222 aa13.78□□□□□ -0.2
SRP54-201ENST00000216774 HBS1LQ9Y450 684 aaKnown RBP13.78□□□□□ -0.2
SRP54-201ENST00000216774 PCDHA11Q9Y5I1 949 aa13.78□□□□□ -0.2
SRP54-201ENST00000216774 LTBP3Q9NS15 1303 aa13.77□□□□□ -0.2
SRP54-201ENST00000216774 HMX2A2RU54 273 aa13.77□□□□□ -0.21
SRP54-201ENST00000216774 DPPA5A6NC42 116 aa13.77□□□□□ -0.21
SRP54-201ENST00000216774 H3BRJ5 948 aa13.77□□□□□ -0.21
SRP54-201ENST00000216774 UGT1A9O60656 530 aa13.77□□□□□ -0.21
SRP54-201ENST00000216774 NPTXRO95502 500 aa13.77□□□□□ -0.21
SRP54-201ENST00000216774 PDHA1P08559 390 aa13.77□□□□□ -0.21
SRP54-201ENST00000216774 AQP5P55064 265 aa13.77□□□□□ -0.21
SRP54-201ENST00000216774 TRMT5Q32P41 509 aaKnown RBP13.77□□□□□ -0.21
SRP54-201ENST00000216774 PKDCCQ504Y2 493 aa13.77□□□□□ -0.21
SRP54-201ENST00000216774 CES4AQ5XG92 561 aa13.77□□□□□ -0.21
SRP54-201ENST00000216774 KYAT3Q6YP21 454 aaKnown RBP13.77□□□□□ -0.21
SRP54-201ENST00000216774 TMEM110Q86TL2 294 aa13.77□□□□□ -0.21
SRP54-201ENST00000216774 TREML1Q86YW5 311 aa13.77□□□□□ -0.21
SRP54-201ENST00000216774 ZDHHC17Q8IUH5 632 aa13.77□□□□□ -0.21
SRP54-201ENST00000216774 SLC4A5Q9BY07 1137 aa13.77□□□□□ -0.21
SRP54-201ENST00000216774 UGT1A7Q9HAW7 530 aa13.77□□□□□ -0.21
SRP54-201ENST00000216774 UGT1A10Q9HAW8 530 aa13.77□□□□□ -0.21
SRP54-201ENST00000216774 UGT1A8Q9HAW9 530 aa13.77□□□□□ -0.21
SRP54-201ENST00000216774 PCMTD2Q9NV79 361 aa13.77□□□□□ -0.21
SRP54-201ENST00000216774 MAD1L1Q9Y6D9 718 aa13.77□□□□□ -0.21
SRP54-201ENST00000216774 CCDC189A1A4V9 331 aa13.76□□□□□ -0.21
SRP54-201ENST00000216774 SPECC1L-ADORA2AF8WAN1 911 aa13.76□□□□□ -0.21
SRP54-201ENST00000216774 TM7SF2O76062 418 aa13.76□□□□□ -0.21
SRP54-201ENST00000216774 SLC25A27O95847 323 aa13.76□□□□□ -0.21
SRP54-201ENST00000216774 ENO1P06733 434 aaKnown RBP13.76□□□□□ -0.21
SRP54-201ENST00000216774 SERPINA6P08185 405 aa13.76□□□□□ -0.21
SRP54-201ENST00000216774 CYP2F1P24903 491 aa13.76□□□□□ -0.21
SRP54-201ENST00000216774 THOC5Q13769 683 aaKnown RBP13.76□□□□□ -0.21
SRP54-201ENST00000216774 DPYSL2Q16555 572 aa13.76□□□□□ -0.21
SRP54-201ENST00000216774 CA9Q16790 459 aa13.76□□□□□ -0.21
SRP54-201ENST00000216774 PMF1Q6P1K2 205 aa13.76□□□□□ -0.21
SRP54-201ENST00000216774 RBM15BQ8NDT2 890 aaKnown RBP13.76□□□□□ -0.21
SRP54-201ENST00000216774 STKLD1Q8NE28 680 aa13.76□□□□□ -0.21
SRP54-201ENST00000216774 ACMSDQ8TDX5 336 aa13.76□□□□□ -0.21
SRP54-201ENST00000216774 FGD4Q96M96 766 aa13.76□□□□□ -0.21
SRP54-201ENST00000216774 C1orf21Q9H246 121 aa13.76□□□□□ -0.21
SRP54-201ENST00000216774 VCXQ9H320 206 aa13.76□□□□□ -0.21
SRP54-201ENST00000216774 THAP1Q9NVV9 213 aa13.76□□□□□ -0.21
SRP54-201ENST00000216774 DPP3Q9NY33 737 aa13.76□□□□□ -0.21
SRP54-201ENST00000216774 ERAP1Q9NZ08 941 aa13.76□□□□□ -0.21
SRP54-201ENST00000216774 GGA3Q9NZ52 723 aa13.76□□□□□ -0.21
SRP54-201ENST00000216774 MOCS1Q9NZB8 636 aa13.76□□□□□ -0.21
SRP54-201ENST00000216774 ANGPTL2Q9UKU9 493 aa13.76□□□□□ -0.21
SRP54-201ENST00000216774 PLA2G4CQ9UP65 541 aa13.76□□□□□ -0.21
SRP54-201ENST00000216774 ZSWIM8A7E2V4 1837 aa13.76□□□□□ -0.21
SRP54-201ENST00000216774 CCDC195A0A1B0GUA6 201 aa13.76□□□□□ -0.21
SRP54-201ENST00000216774 CYB561D2O14569 222 aa13.76□□□□□ -0.21
SRP54-201ENST00000216774 MAP3K7O43318 606 aa13.76□□□□□ -0.21
SRP54-201ENST00000216774 USP2O75604 605 aaPredicted RBP13.76□□□□□ -0.21
SRP54-201ENST00000216774 METTL18O95568 372 aa13.76□□□□□ -0.21
SRP54-201ENST00000216774 PTPN9P43378 593 aa13.76□□□□□ -0.21
SRP54-201ENST00000216774 RGS7P49802 495 aa13.76□□□□□ -0.21
SRP54-201ENST00000216774 CCNHP51946 323 aaPredicted RBP13.76□□□□□ -0.21
SRP54-201ENST00000216774 HDAC4P56524 1084 aa13.76□□□□□ -0.21
SRP54-201ENST00000216774 SARNPP82979 210 aaKnown RBP13.76□□□□□ -0.21
SRP54-201ENST00000216774 STX3Q13277 289 aa13.76□□□□□ -0.21
SRP54-201ENST00000216774 SEMA5AQ13591 1074 aa13.76□□□□□ -0.21
SRP54-201ENST00000216774 VGLL4Q14135 290 aa13.76□□□□□ -0.21
SRP54-201ENST00000216774 ZNF484Q5JVG2 852 aa13.76□□□□□ -0.21
SRP54-201ENST00000216774 C6orf163Q5TEZ5 329 aa13.76□□□□□ -0.21
SRP54-201ENST00000216774 MROH9Q5TGP6 573 aa13.76□□□□□ -0.21
SRP54-201ENST00000216774 TRMT10BQ6PF06 316 aaKnown RBP13.76□□□□□ -0.21
SRP54-201ENST00000216774 PAXIP1Q6ZW49 1069 aaPredicted RBP13.76□□□□□ -0.21
SRP54-201ENST00000216774 DEPDC1BQ8WUY9 529 aa13.76□□□□□ -0.21
SRP54-201ENST00000216774 KHSRPQ92945 711 aaKnown RBP eCLIP13.76□□□□□ -0.219e-8■□□□□ 9.3
SRP54-201ENST00000216774 FAM161BQ96MY7 647 aa13.76□□□□□ -0.21
SRP54-201ENST00000216774 QKIQ96PU8 341 aaKnown RBP eCLIP13.76□□□□□ -0.214e-9■■■■■ 35.8
SRP54-201ENST00000216774 CCDC106Q9BWC9 280 aa13.76□□□□□ -0.21
SRP54-201ENST00000216774 STN1Q9H668 368 aaKnown RBP13.76□□□□□ -0.21
SRP54-201ENST00000216774 DNAJB4Q9UDY4 337 aa13.76□□□□□ -0.21
SRP54-201ENST00000216774 GTF2IRD1Q9UHL9 959 aa13.76□□□□□ -0.21
SRP54-201ENST00000216774 PTPRFP10586 1907 aa13.76□□□□□ -0.21
SRP54-201ENST00000216774 CIB2O75838 187 aa13.75□□□□□ -0.21
SRP54-201ENST00000216774 ALDH1A2O94788 518 aa13.75□□□□□ -0.21
SRP54-201ENST00000216774 PPP6R3Q5H9R7 873 aaPredicted RBP13.75□□□□□ -0.21
SRP54-201ENST00000216774 STEAP4Q687X5 459 aa13.75□□□□□ -0.21
SRP54-201ENST00000216774 SCUBE1Q8IWY4 988 aa13.75□□□□□ -0.21
SRP54-201ENST00000216774 C12orf29Q8N999 325 aa13.75□□□□□ -0.21
SRP54-201ENST00000216774 TRPM4Q8TD43 1214 aa13.75□□□□□ -0.21
SRP54-201ENST00000216774 ZBTB10Q96DT7 871 aa13.75□□□□□ -0.21
SRP54-201ENST00000216774 MLNP12872 115 aa13.75□□□□□ -0.21
SRP54-201ENST00000216774 ARF4P18085 180 aaPredicted RBP13.75□□□□□ -0.21
SRP54-201ENST00000216774 AOC1P19801 751 aa13.75□□□□□ -0.21
SRP54-201ENST00000216774 L1CAMP32004 1257 aa13.75□□□□□ -0.21
SRP54-201ENST00000216774 CPA2P48052 419 aa13.75□□□□□ -0.21
SRP54-201ENST00000216774 PPP1R26Q5T8A7 1209 aaPredicted RBP13.75□□□□□ -0.21
SRP54-201ENST00000216774 TMEM154Q6P9G4 183 aa13.75□□□□□ -0.21
SRP54-201ENST00000216774 TTC30AQ86WT1 665 aa13.75□□□□□ -0.21
SRP54-201ENST00000216774 MPP5Q8N3R9 675 aa13.75□□□□□ -0.21
SRP54-201ENST00000216774 SLC35F5Q8WV83 523 aa13.75□□□□□ -0.21
SRP54-201ENST00000216774 CPB2Q96IY4 423 aa13.75□□□□□ -0.21
SRP54-201ENST00000216774 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms