RNA–Protein interactions for RNA: ENST00000639244.1

SCN3A-209, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5 BASIC

Gene SCN3A, Length 8,854 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-209ENST00000639244 STK32BQ9NY57 414 aa4.44□□□□□ -1.7
SCN3A-209ENST00000639244 OR6C2Q9NZP2 312 aa4.44□□□□□ -1.7
SCN3A-209ENST00000639244 ANKRD30BQ9BXX2 1392 aa4.44□□□□□ -1.7
SCN3A-209ENST00000639244 POLR1CO15160 346 aaPredicted RBP4.44□□□□□ -1.7
SCN3A-209ENST00000639244 LGR5O75473 907 aa4.44□□□□□ -1.7
SCN3A-209ENST00000639244 GCNT3O95395 438 aa4.44□□□□□ -1.7
SCN3A-209ENST00000639244 APOC1P02654 83 aa4.44□□□□□ -1.7
SCN3A-209ENST00000639244 GALP22466 123 aa4.44□□□□□ -1.7
SCN3A-209ENST00000639244 GSK3AP49840 483 aa4.44□□□□□ -1.7
SCN3A-209ENST00000639244 SLC7A2P52569 658 aa4.44□□□□□ -1.7
SCN3A-209ENST00000639244 NUP107P57740 925 aa4.44□□□□□ -1.7
SCN3A-209ENST00000639244 PCDH1Q08174 1060 aa4.44□□□□□ -1.7
SCN3A-209ENST00000639244 PHKG1Q16816 387 aa4.44□□□□□ -1.7
SCN3A-209ENST00000639244 LEXMQ3ZCV2 418 aa4.44□□□□□ -1.7
SCN3A-209ENST00000639244 LDLRAD1Q5T700 205 aa4.44□□□□□ -1.7
SCN3A-209ENST00000639244 TCEAL6Q6IPX3 200 aa4.44□□□□□ -1.7
SCN3A-209ENST00000639244 HMBOX1Q6NT76 420 aa4.44□□□□□ -1.7
SCN3A-209ENST00000639244 CREG2Q8IUH2 290 aa4.44□□□□□ -1.7
SCN3A-209ENST00000639244 ARL14Q8N4G2 192 aa4.44□□□□□ -1.7
SCN3A-209ENST00000639244 THRSPQ92748 146 aa4.44□□□□□ -1.7
SCN3A-209ENST00000639244 MTFMTQ96DP5 389 aaKnown RBP4.44□□□□□ -1.7
SCN3A-209ENST00000639244 VSX1Q9NZR4 365 aaPredicted RBP4.44□□□□□ -1.7
SCN3A-209ENST00000639244 PCDHGA8Q9Y5G5 932 aa4.44□□□□□ -1.7
SCN3A-209ENST00000639244 CAMSAP2Q08AD1 1489 aa4.44□□□□□ -1.7
SCN3A-209ENST00000639244 KIF20BQ96Q89 1820 aa4.44□□□□□ -1.7
SCN3A-209ENST00000639244 FYCO1Q9BQS8 1478 aa4.44□□□□□ -1.7
SCN3A-209ENST00000639244 IRS4O14654 1257 aaPredicted RBP4.44□□□□□ -1.7
SCN3A-209ENST00000639244 SLC25A17O43808 307 aa4.44□□□□□ -1.7
SCN3A-209ENST00000639244 PLEKP08567 350 aaPredicted RBP4.44□□□□□ -1.7
SCN3A-209ENST00000639244 SNRPA1P09661 255 aaKnown RBP4.44□□□□□ -1.7
SCN3A-209ENST00000639244 RALAP11233 206 aa4.44□□□□□ -1.7
SCN3A-209ENST00000639244 ATP2B4P23634 1241 aa4.44□□□□□ -1.7
SCN3A-209ENST00000639244 L1CAMP32004 1257 aa4.44□□□□□ -1.7
SCN3A-209ENST00000639244 RCVRNP35243 200 aa4.44□□□□□ -1.7
SCN3A-209ENST00000639244 YWHAZP63104 245 aaKnown RBP4.44□□□□□ -1.7
SCN3A-209ENST00000639244 GUCY2DQ02846 1103 aa4.44□□□□□ -1.7
SCN3A-209ENST00000639244 ZNF268Q14587 947 aaPredicted RBP4.44□□□□□ -1.7
SCN3A-209ENST00000639244 KLHL12Q53G59 568 aa4.44□□□□□ -1.7
SCN3A-209ENST00000639244 SAPCD1Q5SSQ6 148 aa4.44□□□□□ -1.7
SCN3A-209ENST00000639244 STRA8Q7Z7C7 330 aa4.44□□□□□ -1.7
SCN3A-209ENST00000639244 DCP2Q8IU60 420 aaKnown RBP4.44□□□□□ -1.7
SCN3A-209ENST00000639244 NELFCDQ8IXH7 590 aa4.44□□□□□ -1.7
SCN3A-209ENST00000639244 FAM71DQ8N9W8 422 aa4.44□□□□□ -1.7
SCN3A-209ENST00000639244 LHFPL5Q8TAF8 219 aa4.44□□□□□ -1.7
SCN3A-209ENST00000639244 ARHGEF26Q96DR7 871 aa4.44□□□□□ -1.7
SCN3A-209ENST00000639244 CTRCQ99895 268 aa4.44□□□□□ -1.7
SCN3A-209ENST00000639244 SYT15Q9BQS2 421 aa4.44□□□□□ -1.7
SCN3A-209ENST00000639244 TUBGCP2Q9BSJ2 902 aa4.44□□□□□ -1.7
SCN3A-209ENST00000639244 MENTQ9BUN1 341 aa4.44□□□□□ -1.7
SCN3A-209ENST00000639244 TREM1Q9NP99 234 aa4.44□□□□□ -1.7
SCN3A-209ENST00000639244 BRD7Q9NPI1 651 aa4.44□□□□□ -1.7
SCN3A-209ENST00000639244 TSPYL4Q9UJ04 414 aa4.44□□□□□ -1.7
SCN3A-209ENST00000639244 C19orf53Q9UNZ5 99 aaPredicted RBP4.44□□□□□ -1.7
SCN3A-209ENST00000639244 MROH7-TTC4A0A0A0MT08 1334 aa4.44□□□□□ -1.7
SCN3A-209ENST00000639244 TCOF1Q13428 1488 aaKnown RBP4.44□□□□□ -1.7
SCN3A-209ENST00000639244 EFCAB10A6NFE3 127 aa4.44□□□□□ -1.7
SCN3A-209ENST00000639244 ZSCAN5CA6NGD5 496 aaPredicted RBP4.44□□□□□ -1.7
SCN3A-209ENST00000639244 K7EPI3 171 aa4.44□□□□□ -1.7
SCN3A-209ENST00000639244 GGPS1O95749 300 aa4.44□□□□□ -1.7
SCN3A-209ENST00000639244 CLTBP09497 229 aa4.44□□□□□ -1.7
SCN3A-209ENST00000639244 POU3F4P49335 361 aa4.44□□□□□ -1.7
SCN3A-209ENST00000639244 ACTR1AP61163 376 aa4.44□□□□□ -1.7
SCN3A-209ENST00000639244 FAM69CQ0P6D2 419 aa4.44□□□□□ -1.7
SCN3A-209ENST00000639244 C6orf10Q5SRN2 563 aa4.44□□□□□ -1.7
SCN3A-209ENST00000639244 NUDCD3Q8IVD9 361 aa4.44□□□□□ -1.7
SCN3A-209ENST00000639244 GPR156Q8NFN8 814 aa4.44□□□□□ -1.7
SCN3A-209ENST00000639244 TSPEARQ8WU66 669 aa4.44□□□□□ -1.7
SCN3A-209ENST00000639244 ZFYVE19Q96K21 471 aa4.44□□□□□ -1.7
SCN3A-209ENST00000639244 ZSCAN5AQ9BUG6 496 aa4.44□□□□□ -1.7
SCN3A-209ENST00000639244 STRA6Q9BX79 667 aa4.44□□□□□ -1.7
SCN3A-209ENST00000639244 TEKT3Q9BXF9 490 aa4.44□□□□□ -1.7
SCN3A-209ENST00000639244 USP44Q9H0E7 712 aa4.44□□□□□ -1.7
SCN3A-209ENST00000639244 C1orf21Q9H246 121 aa4.44□□□□□ -1.7
SCN3A-209ENST00000639244 KLHL31Q9H511 634 aa4.44□□□□□ -1.7
SCN3A-209ENST00000639244 SAGE1Q9NXZ1 904 aa4.44□□□□□ -1.7
SCN3A-209ENST00000639244 ZNHIT2Q9UHR6 403 aa4.44□□□□□ -1.7
SCN3A-209ENST00000639244 CNOT7Q9UIV1 285 aaKnown RBP4.44□□□□□ -1.7
SCN3A-209ENST00000639244 CCDC61Q9Y6R9 512 aa4.44□□□□□ -1.7
SCN3A-209ENST00000639244 NCKAP5O14513 1909 aa4.44□□□□□ -1.7
SCN3A-209ENST00000639244 REREQ9P2R6 1566 aa4.44□□□□□ -1.7
SCN3A-209ENST00000639244 RGSL1A5PLK6 1076 aa4.44□□□□□ -1.7
SCN3A-209ENST00000639244 CCRL2O00421 344 aa4.44□□□□□ -1.7
SCN3A-209ENST00000639244 PRPSAP2O60256 369 aa4.44□□□□□ -1.7
SCN3A-209ENST00000639244 VHLP40337 213 aa4.44□□□□□ -1.7
SCN3A-209ENST00000639244 OR1G1P47890 313 aa4.44□□□□□ -1.7
SCN3A-209ENST00000639244 TPGS1Q6ZTW0 290 aa4.44□□□□□ -1.7
SCN3A-209ENST00000639244 ADAMTSL2Q86TH1 951 aa4.44□□□□□ -1.7
SCN3A-209ENST00000639244 ZNF680Q8NEM1 530 aa4.44□□□□□ -1.7
SCN3A-209ENST00000639244 SLC44A1Q8WWI5 657 aa4.44□□□□□ -1.7
SCN3A-209ENST00000639244 RAD51AP1Q96B01 352 aa4.44□□□□□ -1.7
SCN3A-209ENST00000639244 RIT2Q99578 217 aa4.44□□□□□ -1.7
SCN3A-209ENST00000639244 ZNF184Q99676 751 aaPredicted RBP4.44□□□□□ -1.7
SCN3A-209ENST00000639244 NTPCRQ9BSD7 190 aaKnown RBP4.44□□□□□ -1.7
SCN3A-209ENST00000639244 NUP85Q9BW27 656 aa4.44□□□□□ -1.7
SCN3A-209ENST00000639244 GGNBP2Q9H3C7 697 aa4.44□□□□□ -1.7
SCN3A-209ENST00000639244 Q9H521 79 aa4.44□□□□□ -1.7
SCN3A-209ENST00000639244 SLITRK6Q9H5Y7 841 aa4.44□□□□□ -1.7
SCN3A-209ENST00000639244 CABP2Q9NPB3 220 aa4.44□□□□□ -1.7
SCN3A-209ENST00000639244 ETNK2Q9NVF9 386 aa4.44□□□□□ -1.7
SCN3A-209ENST00000639244 FGFR1OP2Q9NVK5 253 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms