RNA–Protein interactions for RNA: ENST00000638009.1

CACNA1A-257, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,665 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-257ENST00000638009 LDLRP01130 860 aa19.87■□□□□ 0.77
CACNA1A-257ENST00000638009 CCNG2Q16589 344 aa19.87■□□□□ 0.77
CACNA1A-257ENST00000638009 C5orf22Q49AR2 442 aa19.87■□□□□ 0.77
CACNA1A-257ENST00000638009 SAMD4BQ5PRF9 694 aaKnown RBP19.87■□□□□ 0.77
CACNA1A-257ENST00000638009 MLXQ9UH92 298 aa19.87■□□□□ 0.77
CACNA1A-257ENST00000638009 IFRD1O00458 451 aaPredicted RBP19.87■□□□□ 0.77
CACNA1A-257ENST00000638009 CHRNGP07510 517 aa19.87■□□□□ 0.77
CACNA1A-257ENST00000638009 TPBGLP0DKB5 382 aa19.87■□□□□ 0.77
CACNA1A-257ENST00000638009 CHN2P52757 468 aa19.87■□□□□ 0.77
CACNA1A-257ENST00000638009 ELOVL6Q9H5J4 265 aa19.87■□□□□ 0.77
CACNA1A-257ENST00000638009 NFYCQ13952 458 aa19.87■□□□□ 0.77
CACNA1A-257ENST00000638009 MFSD14CQ5VZR4 134 aa19.87■□□□□ 0.77
CACNA1A-257ENST00000638009 SNRNP48Q6IEG0 339 aaKnown RBP19.87■□□□□ 0.77
CACNA1A-257ENST00000638009 ZNF184Q99676 751 aaPredicted RBP19.87■□□□□ 0.77
CACNA1A-257ENST00000638009 SCUBE2Q9NQ36 999 aa19.87■□□□□ 0.77
CACNA1A-257ENST00000638009 LOC100653049A0A140TA62 436 aa19.87■□□□□ 0.77
CACNA1A-257ENST00000638009 SRP54P61011 504 aaKnown RBP19.87■□□□□ 0.77
CACNA1A-257ENST00000638009 S100A12P80511 92 aa19.87■□□□□ 0.77
CACNA1A-257ENST00000638009 TFDP3Q5H9I0 405 aa19.87■□□□□ 0.77
CACNA1A-257ENST00000638009 C1orf189Q5VU69 101 aa19.87■□□□□ 0.77
CACNA1A-257ENST00000638009 ZNF513Q8N8E2 541 aaPredicted RBP19.87■□□□□ 0.77
CACNA1A-257ENST00000638009 AKAP1Q92667 903 aaKnown RBP eCLIP19.87■□□□□ 0.77
CACNA1A-257ENST00000638009 ZNF512Q96ME7 567 aaPredicted RBP19.87■□□□□ 0.77
CACNA1A-257ENST00000638009 SNX8Q9Y5X2 465 aa19.87■□□□□ 0.77
CACNA1A-257ENST00000638009 ZNF638Q14966 1978 aaKnown RBP19.86■□□□□ 0.77
CACNA1A-257ENST00000638009 OR14I1A6ND48 311 aa19.86■□□□□ 0.77
CACNA1A-257ENST00000638009 GAS2O43903 313 aaKnown RBP19.86■□□□□ 0.77
CACNA1A-257ENST00000638009 FUT11Q495W5 492 aa19.86■□□□□ 0.77
CACNA1A-257ENST00000638009 ZC3H10Q96K80 434 aaKnown RBP19.86■□□□□ 0.77
CACNA1A-257ENST00000638009 JMJD4Q9H9V9 463 aa19.86■□□□□ 0.77
CACNA1A-257ENST00000638009 CLN6Q9NWW5 311 aa19.86■□□□□ 0.77
CACNA1A-257ENST00000638009 SMIM11AP58511 58 aa19.86■□□□□ 0.77
CACNA1A-257ENST00000638009 SPAG16Q8N0X2 631 aa19.86■□□□□ 0.77
CACNA1A-257ENST00000638009 SLC35G2Q8TBE7 412 aa19.86■□□□□ 0.77
CACNA1A-257ENST00000638009 L1RE1Q9UN81 338 aa19.86■□□□□ 0.77
CACNA1A-257ENST00000638009 RUVBL2Q9Y230 463 aaKnown RBP19.86■□□□□ 0.77
CACNA1A-257ENST00000638009 HS6ST1O60243 411 aa19.86■□□□□ 0.77
CACNA1A-257ENST00000638009 CDH3P22223 829 aa19.86■□□□□ 0.77
CACNA1A-257ENST00000638009 MYL9P24844 172 aa19.86■□□□□ 0.77
CACNA1A-257ENST00000638009 BHLHB9Q6PI77 547 aa19.86■□□□□ 0.77
CACNA1A-257ENST00000638009 STOX1Q6ZVD7 989 aa19.86■□□□□ 0.77
CACNA1A-257ENST00000638009 KIF2BQ8N4N8 673 aa19.86■□□□□ 0.77
CACNA1A-257ENST00000638009 NUDT5Q9UKK9 219 aa19.86■□□□□ 0.77
CACNA1A-257ENST00000638009 NCAM2O15394 837 aa19.86■□□□□ 0.77
CACNA1A-257ENST00000638009 MAGEB3O15480 346 aa19.86■□□□□ 0.77
CACNA1A-257ENST00000638009 SNAP91O60641 907 aa19.86■□□□□ 0.77
CACNA1A-257ENST00000638009 GYG1P46976 350 aa19.86■□□□□ 0.77
CACNA1A-257ENST00000638009 NAA20P61599 178 aa19.86■□□□□ 0.77
CACNA1A-257ENST00000638009 RASA2Q15283 850 aa19.86■□□□□ 0.77
CACNA1A-257ENST00000638009 NSMCE2Q96MF7 247 aa19.86■□□□□ 0.77
CACNA1A-257ENST00000638009 ADGRG1Q9Y653 693 aa19.86■□□□□ 0.77
CACNA1A-257ENST00000638009 SNRNP200O75643 2136 aaKnown RBP19.86■□□□□ 0.77
CACNA1A-257ENST00000638009 OPLAHO14841 1288 aa19.86■□□□□ 0.77
CACNA1A-257ENST00000638009 TADA2AO75478 443 aa19.86■□□□□ 0.77
CACNA1A-257ENST00000638009 USP11P51784 963 aa19.86■□□□□ 0.77
CACNA1A-257ENST00000638009 MCCD1P59942 119 aaPredicted RBP19.86■□□□□ 0.77
CACNA1A-257ENST00000638009 ERMARDQ5T6L9 678 aa19.86■□□□□ 0.77
CACNA1A-257ENST00000638009 FAM228AQ86W67 206 aa19.86■□□□□ 0.77
CACNA1A-257ENST00000638009 TRPV1Q8NER1 839 aa19.86■□□□□ 0.77
CACNA1A-257ENST00000638009 CYLDQ9NQC7 956 aa19.86■□□□□ 0.77
CACNA1A-257ENST00000638009 MOCS2O96007 188 aaPredicted RBP19.86■□□□□ 0.77
CACNA1A-257ENST00000638009 GSTM5P46439 218 aa19.86■□□□□ 0.77
CACNA1A-257ENST00000638009 PACS1Q6VY07 963 aa19.86■□□□□ 0.77
CACNA1A-257ENST00000638009 SMIM5Q71RC9 77 aa19.86■□□□□ 0.77
CACNA1A-257ENST00000638009 DEPDC4Q8N2C3 294 aa19.86■□□□□ 0.77
CACNA1A-257ENST00000638009 POLR3FQ9H1D9 316 aaPredicted RBP19.86■□□□□ 0.77
CACNA1A-257ENST00000638009 C12orf4Q9NQ89 552 aa19.86■□□□□ 0.77
CACNA1A-257ENST00000638009 EVA1BQ9NVM1 165 aa19.86■□□□□ 0.77
CACNA1A-257ENST00000638009 FAM50BQ9Y247 325 aa19.86■□□□□ 0.77
CACNA1A-257ENST00000638009 PEG3Q9GZU2 1588 aa19.86■□□□□ 0.77
CACNA1A-257ENST00000638009 RBMXL2O75526 392 aaKnown RBP19.85■□□□□ 0.77
CACNA1A-257ENST00000638009 OR6A2O95222 327 aa19.85■□□□□ 0.77
CACNA1A-257ENST00000638009 TFE3P19532 575 aaPredicted RBP19.85■□□□□ 0.77
CACNA1A-257ENST00000638009 DDI2Q5TDH0 399 aa19.85■□□□□ 0.77
CACNA1A-257ENST00000638009 RASGRP2Q7LDG7 609 aa19.85■□□□□ 0.77
CACNA1A-257ENST00000638009 MROH7Q68CQ1 1323 aa19.85■□□□□ 0.77
CACNA1A-257ENST00000638009 RHOBTB3O94955 611 aa19.85■□□□□ 0.77
CACNA1A-257ENST00000638009 PSMC5P62195 406 aa19.85■□□□□ 0.77
CACNA1A-257ENST00000638009 DLG1Q12959 904 aa19.85■□□□□ 0.77
CACNA1A-257ENST00000638009 ERGIC3Q9Y282 383 aa19.85■□□□□ 0.77
CACNA1A-257ENST00000638009 SDR42E2A6NKP2 422 aa19.85■□□□□ 0.77
CACNA1A-257ENST00000638009 COPZ1P61923 177 aa19.85■□□□□ 0.77
CACNA1A-257ENST00000638009 ATP2C1P98194 919 aaPredicted RBP19.85■□□□□ 0.77
CACNA1A-257ENST00000638009 ACTRT2Q8TDY3 377 aa19.85■□□□□ 0.77
CACNA1A-257ENST00000638009 MCEEQ96PE7 176 aa19.85■□□□□ 0.77
CACNA1A-257ENST00000638009 TMCO1Q9UM00 188 aa19.85■□□□□ 0.77
CACNA1A-257ENST00000638009 ABCB11O95342 1321 aa19.85■□□□□ 0.77
CACNA1A-257ENST00000638009 NR5A2O00482 541 aa19.85■□□□□ 0.77
CACNA1A-257ENST00000638009 TPST1O60507 370 aa19.85■□□□□ 0.77
CACNA1A-257ENST00000638009 ITIH1P19827 911 aa19.85■□□□□ 0.77
CACNA1A-257ENST00000638009 CACNB1Q02641 598 aaPredicted RBP19.85■□□□□ 0.77
CACNA1A-257ENST00000638009 PDIA6Q15084 440 aa19.85■□□□□ 0.77
CACNA1A-257ENST00000638009 PCSK7Q16549 785 aa19.85■□□□□ 0.77
CACNA1A-257ENST00000638009 LRRC74BQ6ZQY2 392 aa19.85■□□□□ 0.77
CACNA1A-257ENST00000638009 RAB11FIP2Q7L804 512 aa19.85■□□□□ 0.77
CACNA1A-257ENST00000638009 MAGEC3Q8TD91 643 aa19.85■□□□□ 0.77
CACNA1A-257ENST00000638009 FAM120BQ96EK7 910 aaKnown RBP19.85■□□□□ 0.77
CACNA1A-257ENST00000638009 MAGEB16A2A368 324 aa19.85■□□□□ 0.77
CACNA1A-257ENST00000638009 SERPINA1P01009 418 aa19.85■□□□□ 0.77
CACNA1A-257ENST00000638009 GTF2H1P32780 548 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms