RNA–Protein interactions for RNA: ENST00000621870.4

GGA3-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best)

Gene GGA3, Length 4,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-223ENST00000621870 FICDQ9BVA6 458 aa9.54□□□□□ -0.88
GGA3-223ENST00000621870 FOXP3Q9BZS1 431 aa9.54□□□□□ -0.88
GGA3-223ENST00000621870 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.54□□□□□ -0.88
GGA3-223ENST00000621870 GIT1Q9Y2X7 761 aa9.54□□□□□ -0.88
GGA3-223ENST00000621870 ROBO1Q9Y6N7 1651 aa9.54□□□□□ -0.88
GGA3-223ENST00000621870 TGFB1I1O43294 461 aa9.54□□□□□ -0.88
GGA3-223ENST00000621870 DCTN3O75935 186 aa9.54□□□□□ -0.88
GGA3-223ENST00000621870 PBLDP30039 288 aaPredicted RBP9.54□□□□□ -0.88
GGA3-223ENST00000621870 RENBPP51606 427 aa9.54□□□□□ -0.88
GGA3-223ENST00000621870 POU6F1Q14863 301 aa9.54□□□□□ -0.88
GGA3-223ENST00000621870 PCBP1Q15365 356 aaKnown RBP eCLIP9.54□□□□□ -0.881e-10■□□□□ 8.9
GGA3-223ENST00000621870 TBCCQ15814 346 aa9.54□□□□□ -0.88
GGA3-223ENST00000621870 HECTD3Q5T447 861 aa9.54□□□□□ -0.88
GGA3-223ENST00000621870 LRRC8DQ7L1W4 858 aa9.54□□□□□ -0.88
GGA3-223ENST00000621870 ZSWIM2Q8NEG5 633 aa9.54□□□□□ -0.88
GGA3-223ENST00000621870 SCLYQ96I15 445 aa9.54□□□□□ -0.88
GGA3-223ENST00000621870 XPO6Q96QU8 1125 aaKnown RBP9.54□□□□□ -0.88
GGA3-223ENST00000621870 HAUS8Q9BT25 410 aa9.54□□□□□ -0.88
GGA3-223ENST00000621870 MFSD1Q9H3U5 465 aa9.54□□□□□ -0.88
GGA3-223ENST00000621870 TXNRD2Q9NNW7 524 aa9.54□□□□□ -0.88
GGA3-223ENST00000621870 TRMT13Q9NUP7 481 aaKnown RBP9.54□□□□□ -0.88
GGA3-223ENST00000621870 ADA2Q9NZK5 511 aa9.54□□□□□ -0.88
GGA3-223ENST00000621870 SMIM28A0A1B0GU29 152 aa9.53□□□□□ -0.88
GGA3-223ENST00000621870 SPECC1L-ADORA2AF8WAN1 911 aa9.53□□□□□ -0.88
GGA3-223ENST00000621870 SPAG6O75602 509 aa9.53□□□□□ -0.88
GGA3-223ENST00000621870 TRIM16O95361 564 aa9.53□□□□□ -0.88
GGA3-223ENST00000621870 LYPLA2O95372 231 aa9.53□□□□□ -0.88
GGA3-223ENST00000621870 FGBP02675 491 aa9.53□□□□□ -0.88
GGA3-223ENST00000621870 EPB42P16452 691 aa9.53□□□□□ -0.88
GGA3-223ENST00000621870 PTPN7P35236 360 aa9.53□□□□□ -0.88
GGA3-223ENST00000621870 PPP3CCP48454 512 aa9.53□□□□□ -0.88
GGA3-223ENST00000621870 SMAD3P84022 425 aaKnown RBP9.53□□□□□ -0.88
GGA3-223ENST00000621870 TLE2Q04725 743 aa9.53□□□□□ -0.88
GGA3-223ENST00000621870 DUSP4Q13115 394 aa9.53□□□□□ -0.88
GGA3-223ENST00000621870 RRP1BQ14684 758 aaKnown RBP9.53□□□□□ -0.88
GGA3-223ENST00000621870 C4orf22Q6V702 233 aa9.53□□□□□ -0.88
GGA3-223ENST00000621870 TBC1D19Q8N5T2 526 aa9.53□□□□□ -0.88
GGA3-223ENST00000621870 LPCAT1Q8NF37 534 aa9.53□□□□□ -0.88
GGA3-223ENST00000621870 CSGALNACT1Q8TDX6 532 aa9.53□□□□□ -0.88
GGA3-223ENST00000621870 LRRC37BQ96QE4 947 aa9.53□□□□□ -0.88
GGA3-223ENST00000621870 UTP6Q9NYH9 597 aaKnown RBP9.53□□□□□ -0.88
GGA3-223ENST00000621870 ZNF212Q9UDV6 495 aa9.53□□□□□ -0.88
GGA3-223ENST00000621870 SRRDQ9UH36 339 aa9.53□□□□□ -0.88
GGA3-223ENST00000621870 DMGDHQ9UI17 866 aaKnown RBP9.53□□□□□ -0.88
GGA3-223ENST00000621870 TRMT6Q9UJA5 497 aaKnown RBP9.53□□□□□ -0.88
GGA3-223ENST00000621870 TRIM33Q9UPN9 1127 aa9.53□□□□□ -0.88
GGA3-223ENST00000621870 ROBO3Q96MS0 1386 aa9.53□□□□□ -0.88
GGA3-223ENST00000621870 A0A0B4J269 797 aa9.53□□□□□ -0.88
GGA3-223ENST00000621870 A8MX80 341 aa9.53□□□□□ -0.88
GGA3-223ENST00000621870 OPHN1O60890 802 aa9.53□□□□□ -0.88
GGA3-223ENST00000621870 HAUS5O94927 633 aa9.53□□□□□ -0.88
GGA3-223ENST00000621870 CSH1P0DML2 217 aa9.53□□□□□ -0.88
GGA3-223ENST00000621870 CSH2P0DML3 217 aa9.53□□□□□ -0.88
GGA3-223ENST00000621870 TPH1P17752 444 aa9.53□□□□□ -0.88
GGA3-223ENST00000621870 ITGALP20701 1170 aa9.53□□□□□ -0.88
GGA3-223ENST00000621870 RFC1P35251 1148 aaPredicted RBP9.53□□□□□ -0.88
GGA3-223ENST00000621870 GRM5P41594 1212 aa9.53□□□□□ -0.88
GGA3-223ENST00000621870 RTP1P59025 263 aa9.53□□□□□ -0.88
GGA3-223ENST00000621870 SFSWAPQ12872 951 aaKnown RBP9.53□□□□□ -0.88
GGA3-223ENST00000621870 GRIK3Q13003 919 aa9.53□□□□□ -0.88
GGA3-223ENST00000621870 COLGALT1Q8NBJ5 622 aa9.53□□□□□ -0.88
GGA3-223ENST00000621870 RSPH1Q8WYR4 309 aa9.53□□□□□ -0.88
GGA3-223ENST00000621870 CCDC124Q96CT7 223 aaKnown RBP9.53□□□□□ -0.88
GGA3-223ENST00000621870 VCPIP1Q96JH7 1222 aa9.53□□□□□ -0.88
GGA3-223ENST00000621870 TBCBQ99426 244 aa9.53□□□□□ -0.88
GGA3-223ENST00000621870 FAM96AQ9H5X1 160 aa9.53□□□□□ -0.88
GGA3-223ENST00000621870 ADGRA2Q96PE1 1338 aa9.53□□□□□ -0.88
GGA3-223ENST00000621870 A0A1B0GUA9 196 aa9.53□□□□□ -0.88
GGA3-223ENST00000621870 SDR42E2A6NKP2 422 aa9.53□□□□□ -0.88
GGA3-223ENST00000621870 PDZK1P1A8MUH7 402 aa9.53□□□□□ -0.88
GGA3-223ENST00000621870 SMAPO00193 183 aa9.53□□□□□ -0.88
GGA3-223ENST00000621870 E2F6O75461 281 aa9.53□□□□□ -0.88
GGA3-223ENST00000621870 SRP72O76094 671 aaKnown RBP9.53□□□□□ -0.88
GGA3-223ENST00000621870 RPL9P32969 192 aaKnown RBP9.53□□□□□ -0.88
GGA3-223ENST00000621870 ERFP50548 548 aa9.53□□□□□ -0.88
GGA3-223ENST00000621870 GUCY1A3Q02108 690 aa9.53□□□□□ -0.88
GGA3-223ENST00000621870 STX3Q13277 289 aa9.53□□□□□ -0.88
GGA3-223ENST00000621870 TARBP2Q15633 366 aaKnown RBP9.53□□□□□ -0.88
GGA3-223ENST00000621870 TMCO4Q5TGY1 634 aa9.53□□□□□ -0.88
GGA3-223ENST00000621870 DCLRE1AQ6PJP8 1040 aa9.53□□□□□ -0.88
GGA3-223ENST00000621870 PHACTR4Q8IZ21 702 aa9.53□□□□□ -0.88
GGA3-223ENST00000621870 C3orf20Q8ND61 904 aa9.53□□□□□ -0.88
GGA3-223ENST00000621870 WNT8BQ93098 351 aa9.53□□□□□ -0.88
GGA3-223ENST00000621870 GMLQ99445 158 aa9.53□□□□□ -0.88
GGA3-223ENST00000621870 FRMD8Q9BZ67 464 aaPredicted RBP9.53□□□□□ -0.88
GGA3-223ENST00000621870 CLPBQ9H078 707 aa9.53□□□□□ -0.88
GGA3-223ENST00000621870 TLE6Q9H808 572 aa9.53□□□□□ -0.88
GGA3-223ENST00000621870 SPG21Q9NZD8 308 aa9.53□□□□□ -0.88
GGA3-223ENST00000621870 CDH9Q9ULB4 789 aa9.53□□□□□ -0.88
GGA3-223ENST00000621870 ORC6Q9Y5N6 252 aa9.53□□□□□ -0.88
GGA3-223ENST00000621870 CDY1Q9Y6F8 540 aa9.53□□□□□ -0.88
GGA3-223ENST00000621870 IGKV6D-41A0A0C4DH26 115 aa9.53□□□□□ -0.88
GGA3-223ENST00000621870 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.53□□□□□ -0.88
GGA3-223ENST00000621870 ARHGAP10A1A4S6 786 aa9.53□□□□□ -0.88
GGA3-223ENST00000621870 GMNCA6NCL1 334 aa9.53□□□□□ -0.88
GGA3-223ENST00000621870 OR4Q2P0C623 313 aa9.53□□□□□ -0.88
GGA3-223ENST00000621870 NOS2P35228 1153 aa9.53□□□□□ -0.88
GGA3-223ENST00000621870 EFTUD2Q15029 972 aaKnown RBP eCLIP9.53□□□□□ -0.882e-6■■■■□ 20.3
GGA3-223ENST00000621870 GRAMD1BQ3KR37 738 aa9.53□□□□□ -0.88
GGA3-223ENST00000621870 RAP1GAP2Q684P5 730 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms