RNA–Protein interactions for RNA: ENST00000588617.1

VMP1-208, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 884 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-208ENST00000588617 PBX1P40424 430 aa8.44□□□□□ -1.06
VMP1-208ENST00000588617 ANXA11P50995 505 aaKnown RBP8.44□□□□□ -1.06
VMP1-208ENST00000588617 PDE6CP51160 858 aa8.44□□□□□ -1.06
VMP1-208ENST00000588617 DCTN1Q14203 1278 aa8.44□□□□□ -1.06
VMP1-208ENST00000588617 GRM7Q14831 915 aa8.44□□□□□ -1.06
VMP1-208ENST00000588617 ACOX1Q15067 660 aa8.44□□□□□ -1.06
VMP1-208ENST00000588617 PREPLQ4J6C6 727 aaPredicted RBP8.44□□□□□ -1.06
VMP1-208ENST00000588617 METTL24Q5JXM2 366 aa8.44□□□□□ -1.06
VMP1-208ENST00000588617 CBWD5Q5RIA9 395 aa8.44□□□□□ -1.06
VMP1-208ENST00000588617 ANKRD40Q6AI12 368 aa8.44□□□□□ -1.06
VMP1-208ENST00000588617 FOXR2Q6PJQ5 311 aa8.44□□□□□ -1.06
VMP1-208ENST00000588617 ZNF761Q86XN6 746 aaPredicted RBP8.44□□□□□ -1.06
VMP1-208ENST00000588617 RHOT2Q8IXI1 618 aa8.44□□□□□ -1.06
VMP1-208ENST00000588617 PAAF1Q9BRP4 392 aa8.44□□□□□ -1.06
VMP1-208ENST00000588617 C17orf80Q9BSJ5 609 aa8.44□□□□□ -1.06
VMP1-208ENST00000588617 RSPH9Q9H1X1 276 aaPredicted RBP8.44□□□□□ -1.06
VMP1-208ENST00000588617 SERHL2Q9H4I8 314 aa8.44□□□□□ -1.06
VMP1-208ENST00000588617 SH3GLB2Q9NR46 395 aa8.44□□□□□ -1.06
VMP1-208ENST00000588617 TBC1D14Q9P2M4 693 aa8.44□□□□□ -1.06
VMP1-208ENST00000588617 NFKBIL1Q9UBC1 381 aaPredicted RBP8.44□□□□□ -1.06
VMP1-208ENST00000588617 RIMKLBQ9ULI2 386 aa8.44□□□□□ -1.06
VMP1-208ENST00000588617 SSX2IPQ9Y2D8 614 aa8.44□□□□□ -1.06
VMP1-208ENST00000588617 GDAQ9Y2T3 454 aa8.44□□□□□ -1.06
VMP1-208ENST00000588617 PCDHA10Q9Y5I2 948 aa8.44□□□□□ -1.06
VMP1-208ENST00000588617 SNX14Q9Y5W7 946 aa8.44□□□□□ -1.06
VMP1-208ENST00000588617 PSAT1Q9Y617 370 aa8.44□□□□□ -1.06
VMP1-208ENST00000588617 PIAS3Q9Y6X2 628 aa8.44□□□□□ -1.06
VMP1-208ENST00000588617 CARMIL2Q6F5E8 1435 aa8.44□□□□□ -1.06
VMP1-208ENST00000588617 GTPBP1O00178 669 aaKnown RBP8.43□□□□□ -1.06
VMP1-208ENST00000588617 WDR47O94967 919 aa8.43□□□□□ -1.06
VMP1-208ENST00000588617 CD6P30203 668 aa8.43□□□□□ -1.06
VMP1-208ENST00000588617 MLH1P40692 756 aa8.43□□□□□ -1.06
VMP1-208ENST00000588617 HSD11B2P80365 405 aa8.43□□□□□ -1.06
VMP1-208ENST00000588617 CAP1Q01518 475 aa8.43□□□□□ -1.06
VMP1-208ENST00000588617 RBM20Q5T481 1227 aaKnown RBP8.43□□□□□ -1.06
VMP1-208ENST00000588617 METRNLQ641Q3 311 aa8.43□□□□□ -1.06
VMP1-208ENST00000588617 SLC22A25Q6T423 547 aa8.43□□□□□ -1.06
VMP1-208ENST00000588617 PXKQ7Z7A4 578 aa8.43□□□□□ -1.06
VMP1-208ENST00000588617 CLNKQ7Z7G1 428 aa8.43□□□□□ -1.06
VMP1-208ENST00000588617 FAM124AQ86V42 546 aa8.43□□□□□ -1.06
VMP1-208ENST00000588617 ABRAQ8N0Z2 381 aa8.43□□□□□ -1.06
VMP1-208ENST00000588617 MDGA1Q8NFP4 955 aa8.43□□□□□ -1.06
VMP1-208ENST00000588617 OR56A1Q8NGH5 318 aa8.43□□□□□ -1.06
VMP1-208ENST00000588617 NSUN4Q96CB9 384 aaKnown RBP8.43□□□□□ -1.06
VMP1-208ENST00000588617 LRRC37BQ96QE4 947 aa8.43□□□□□ -1.06
VMP1-208ENST00000588617 PIGSQ96S52 555 aa8.43□□□□□ -1.06
VMP1-208ENST00000588617 NEU1Q99519 415 aa8.43□□□□□ -1.06
VMP1-208ENST00000588617 KRTAP4-12Q9BQ66 201 aa8.43□□□□□ -1.06
VMP1-208ENST00000588617 PHF7Q9BWX1 381 aaPredicted RBP8.43□□□□□ -1.06
VMP1-208ENST00000588617 ITPAQ9BY32 194 aa8.43□□□□□ -1.06
VMP1-208ENST00000588617 SLC25A18Q9H1K4 315 aa8.43□□□□□ -1.06
VMP1-208ENST00000588617 TAOK3Q9H2K8 898 aa8.43□□□□□ -1.06
VMP1-208ENST00000588617 STN1Q9H668 368 aaKnown RBP8.43□□□□□ -1.06
VMP1-208ENST00000588617 VEZTQ9HBM0 779 aa8.43□□□□□ -1.06
VMP1-208ENST00000588617 MSL2Q9HCI7 577 aa8.43□□□□□ -1.06
VMP1-208ENST00000588617 DIAPH3Q9NSV4 1193 aa8.43□□□□□ -1.06
VMP1-208ENST00000588617 FBXO28Q9NVF7 368 aa8.43□□□□□ -1.06
VMP1-208ENST00000588617 TAS2R10Q9NYW0 307 aa8.43□□□□□ -1.06
VMP1-208ENST00000588617 LOC105369274A0A096LPK9 316 aa8.42□□□□□ -1.06
VMP1-208ENST00000588617 LOC102723532A0A0G2JNH3 316 aa8.42□□□□□ -1.06
VMP1-208ENST00000588617 A0A1B0GTW7 788 aa8.42□□□□□ -1.06
VMP1-208ENST00000588617 M0QYT0 321 aa8.42□□□□□ -1.06
VMP1-208ENST00000588617 ETV2O00321 342 aaPredicted RBP8.42□□□□□ -1.06
VMP1-208ENST00000588617 FFAR3O14843 346 aa8.42□□□□□ -1.06
VMP1-208ENST00000588617 CTIFO43310 598 aaKnown RBP8.42□□□□□ -1.06
VMP1-208ENST00000588617 HEXIM1O94992 359 aaKnown RBP8.42□□□□□ -1.06
VMP1-208ENST00000588617 INHBBP09529 407 aa8.42□□□□□ -1.06
VMP1-208ENST00000588617 WEE2P0C1S8 567 aa8.42□□□□□ -1.06
VMP1-208ENST00000588617 UBL4AP11441 157 aa8.42□□□□□ -1.06
VMP1-208ENST00000588617 PORP16435 677 aaPredicted RBP8.42□□□□□ -1.06
VMP1-208ENST00000588617 FGFR4P22455 802 aa8.42□□□□□ -1.06
VMP1-208ENST00000588617 GLDCP23378 1020 aa8.42□□□□□ -1.06
VMP1-208ENST00000588617 PRKCHP24723 683 aa8.42□□□□□ -1.06
VMP1-208ENST00000588617 HARS2P49590 506 aaKnown RBP8.42□□□□□ -1.06
VMP1-208ENST00000588617 NHLH2Q02577 135 aa8.42□□□□□ -1.06
VMP1-208ENST00000588617 CLCA4Q14CN2 919 aa8.42□□□□□ -1.06
VMP1-208ENST00000588617 WTAPQ15007 396 aa8.42□□□□□ -1.06
VMP1-208ENST00000588617 FAM102AQ5T9C2 384 aaPredicted RBP8.42□□□□□ -1.06
VMP1-208ENST00000588617 CCDC144NLQ6NUI1 221 aa8.42□□□□□ -1.06
VMP1-208ENST00000588617 KLHL24Q6TFL4 600 aa8.42□□□□□ -1.06
VMP1-208ENST00000588617 TMPRSS9Q7Z410 1059 aa8.42□□□□□ -1.06
VMP1-208ENST00000588617 OR4N4Q8N0Y3 316 aa8.42□□□□□ -1.06
VMP1-208ENST00000588617 NFKBIDQ8NI38 313 aa8.42□□□□□ -1.06
VMP1-208ENST00000588617 OSCP1Q8WVF1 389 aa8.42□□□□□ -1.06
VMP1-208ENST00000588617 ASB2Q96Q27 587 aa8.42□□□□□ -1.06
VMP1-208ENST00000588617 PPP1R10Q96QC0 940 aaKnown RBP8.42□□□□□ -1.06
VMP1-208ENST00000588617 LMF1Q96S06 567 aa8.42□□□□□ -1.06
VMP1-208ENST00000588617 ZSWIM1Q9BR11 485 aa8.42□□□□□ -1.06
VMP1-208ENST00000588617 HERC2P3Q9BVR0 1158 aa8.42□□□□□ -1.06
VMP1-208ENST00000588617 PLA2G12BQ9BX93 195 aa8.42□□□□□ -1.06
VMP1-208ENST00000588617 VN1R3Q9BXE9 311 aa8.42□□□□□ -1.06
VMP1-208ENST00000588617 ALDH8A1Q9H2A2 487 aaPredicted RBP8.42□□□□□ -1.06
VMP1-208ENST00000588617 SYNCQ9H7C4 482 aa8.42□□□□□ -1.06
VMP1-208ENST00000588617 SEPT11Q9NVA2 429 aaKnown RBP8.42□□□□□ -1.06
VMP1-208ENST00000588617 STEAP1Q9UHE8 339 aa8.42□□□□□ -1.06
VMP1-208ENST00000588617 RAB21Q9UL25 225 aa8.42□□□□□ -1.06
VMP1-208ENST00000588617 SUFUQ9UMX1 484 aa8.42□□□□□ -1.06
VMP1-208ENST00000588617 SMG5Q9UPR3 1016 aaKnown RBP8.42□□□□□ -1.06
VMP1-208ENST00000588617 RCE1Q9Y256 329 aa8.42□□□□□ -1.06
VMP1-208ENST00000588617 USP15Q9Y4E8 981 aaPredicted RBP8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms