RNA–Protein interactions for RNA: ENST00000565003.5

CMTM3-209, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-209ENST00000565003 TNFRSF4P43489 277 aa10.54□□□□□ -0.72
CMTM3-209ENST00000565003 PLA2G4AP47712 749 aa10.54□□□□□ -0.72
CMTM3-209ENST00000565003 PSEN1P49768 467 aa10.54□□□□□ -0.72
CMTM3-209ENST00000565003 BCAT1P54687 386 aa10.54□□□□□ -0.72
CMTM3-209ENST00000565003 PDE4CQ08493 712 aa10.54□□□□□ -0.72
CMTM3-209ENST00000565003 GOLGA8FQ08AF8 430 aa10.54□□□□□ -0.72
CMTM3-209ENST00000565003 GOLGA8DPQ0D2H9 430 aa10.54□□□□□ -0.72
CMTM3-209ENST00000565003 EFEMP1Q12805 493 aa10.54□□□□□ -0.72
CMTM3-209ENST00000565003 SF3A2Q15428 464 aaKnown RBP10.54□□□□□ -0.72
CMTM3-209ENST00000565003 CCDC40Q4G0X9 1142 aa10.54□□□□□ -0.72
CMTM3-209ENST00000565003 HSF5Q4G112 596 aaPredicted RBP10.54□□□□□ -0.72
CMTM3-209ENST00000565003 SGO2Q562F6 1265 aa10.54□□□□□ -0.72
CMTM3-209ENST00000565003 C10orf76Q5T2E6 689 aa10.54□□□□□ -0.72
CMTM3-209ENST00000565003 TPGS1Q6ZTW0 290 aa10.54□□□□□ -0.72
CMTM3-209ENST00000565003 BHLHA9Q7RTU4 235 aa10.54□□□□□ -0.72
CMTM3-209ENST00000565003 MIB1Q86YT6 1006 aa10.54□□□□□ -0.72
CMTM3-209ENST00000565003 ZNF276Q8N554 614 aa10.54□□□□□ -0.72
CMTM3-209ENST00000565003 TERB1Q8NA31 727 aa10.54□□□□□ -0.72
CMTM3-209ENST00000565003 NETO1Q8TDF5 533 aa10.54□□□□□ -0.72
CMTM3-209ENST00000565003 NDRG1Q92597 394 aaKnown RBP10.54□□□□□ -0.72
CMTM3-209ENST00000565003 KAT5Q92993 513 aa10.54□□□□□ -0.72
CMTM3-209ENST00000565003 CNOT6LQ96LI5 555 aaKnown RBP10.54□□□□□ -0.72
CMTM3-209ENST00000565003 BBS2Q9BXC9 721 aa10.54□□□□□ -0.72
CMTM3-209ENST00000565003 ULBP1Q9BZM6 244 aa10.54□□□□□ -0.72
CMTM3-209ENST00000565003 UBXN6Q9BZV1 441 aa10.54□□□□□ -0.72
CMTM3-209ENST00000565003 SMOC1Q9H4F8 434 aa10.54□□□□□ -0.72
CMTM3-209ENST00000565003 CLIC5Q9NZA1 410 aa10.54□□□□□ -0.72
CMTM3-209ENST00000565003 MARK1Q9P0L2 795 aa10.54□□□□□ -0.72
CMTM3-209ENST00000565003 DEC1Q9P2X7 70 aa10.54□□□□□ -0.72
CMTM3-209ENST00000565003 RASAL2Q9UJF2 1139 aa10.54□□□□□ -0.72
CMTM3-209ENST00000565003 LSM7Q9UK45 103 aaKnown RBP10.54□□□□□ -0.72
CMTM3-209ENST00000565003 SPTBN2O15020 2390 aa10.54□□□□□ -0.72
CMTM3-209ENST00000565003 MYO18AQ92614 2054 aaKnown RBP10.54□□□□□ -0.72
CMTM3-209ENST00000565003 NCOR2Q9Y618 2525 aa10.53□□□□□ -0.72
CMTM3-209ENST00000565003 TBC1D3BA6NDS4 549 aa10.53□□□□□ -0.72
CMTM3-209ENST00000565003 O00370 1275 aa10.53□□□□□ -0.72
CMTM3-209ENST00000565003 XPO1O14980 1071 aaKnown RBP10.53□□□□□ -0.72
CMTM3-209ENST00000565003 TYRP14679 529 aa10.53□□□□□ -0.72
CMTM3-209ENST00000565003 CD19P15391 556 aa10.53□□□□□ -0.72
CMTM3-209ENST00000565003 SDHBP21912 280 aa10.53□□□□□ -0.72
CMTM3-209ENST00000565003 BCKDHBP21953 392 aa10.53□□□□□ -0.72
CMTM3-209ENST00000565003 TBXAS1P24557 533 aaPredicted RBP10.53□□□□□ -0.72
CMTM3-209ENST00000565003 GBP1P32455 592 aa10.53□□□□□ -0.72
CMTM3-209ENST00000565003 MPLP40238 635 aa10.53□□□□□ -0.72
CMTM3-209ENST00000565003 TKTL1P51854 596 aa10.53□□□□□ -0.72
CMTM3-209ENST00000565003 STX17P56962 302 aa10.53□□□□□ -0.72
CMTM3-209ENST00000565003 YWHAGP61981 247 aaKnown RBP eCLIP10.53□□□□□ -0.72
CMTM3-209ENST00000565003 YWHAEP62258 255 aaKnown RBP10.53□□□□□ -0.72
CMTM3-209ENST00000565003 BST2Q10589 180 aaKnown RBP10.53□□□□□ -0.72
CMTM3-209ENST00000565003 ELF2Q15723 593 aa10.53□□□□□ -0.72
CMTM3-209ENST00000565003 PKDCCQ504Y2 493 aa10.53□□□□□ -0.72
CMTM3-209ENST00000565003 EOGTQ5NDL2 527 aa10.53□□□□□ -0.72
CMTM3-209ENST00000565003 PLA2G2CQ5R387 149 aa10.53□□□□□ -0.72
CMTM3-209ENST00000565003 GRAMD4Q6IC98 578 aa10.53□□□□□ -0.72
CMTM3-209ENST00000565003 FOXR2Q6PJQ5 311 aa10.53□□□□□ -0.72
CMTM3-209ENST00000565003 TOGARAM2Q6ZUX3 1019 aa10.53□□□□□ -0.72
CMTM3-209ENST00000565003 TADA2BQ86TJ2 420 aa10.53□□□□□ -0.72
CMTM3-209ENST00000565003 ABCA7Q8IZY2 2146 aa10.53□□□□□ -0.72
CMTM3-209ENST00000565003 ZNF513Q8N8E2 541 aaPredicted RBP10.53□□□□□ -0.72
CMTM3-209ENST00000565003 OLIG1Q8TAK6 271 aa10.53□□□□□ -0.72
CMTM3-209ENST00000565003 LMO3Q8TAP4 145 aa10.53□□□□□ -0.72
CMTM3-209ENST00000565003 UBA3Q8TBC4 463 aa10.53□□□□□ -0.72
CMTM3-209ENST00000565003 TFAP2BQ92481 460 aa10.53□□□□□ -0.72
CMTM3-209ENST00000565003 BHMTQ93088 406 aa10.53□□□□□ -0.72
CMTM3-209ENST00000565003 NT5C1BQ96P26 610 aa10.53□□□□□ -0.72
CMTM3-209ENST00000565003 CDK5RAP1Q96SZ6 601 aaKnown RBP10.53□□□□□ -0.72
CMTM3-209ENST00000565003 ZSWIM1Q9BR11 485 aa10.53□□□□□ -0.72
CMTM3-209ENST00000565003 RTKNQ9BST9 563 aa10.53□□□□□ -0.72
CMTM3-209ENST00000565003 RXFP3Q9NSD7 469 aa10.53□□□□□ -0.72
CMTM3-209ENST00000565003 DNAJC17Q9NVM6 304 aaKnown RBP10.53□□□□□ -0.72
CMTM3-209ENST00000565003 PLK2Q9NYY3 685 aa10.53□□□□□ -0.72
CMTM3-209ENST00000565003 PCDHGA5Q9Y5G8 931 aa10.53□□□□□ -0.72
CMTM3-209ENST00000565003 TCRBV21S2A2A0A5A6 115 aa10.52□□□□□ -0.73
CMTM3-209ENST00000565003 BICDL2A1A5D9 508 aa10.52□□□□□ -0.73
CMTM3-209ENST00000565003 DCDC2BA2VCK2 349 aa10.52□□□□□ -0.73
CMTM3-209ENST00000565003 RNF225M0QZC1 329 aaPredicted RBP10.52□□□□□ -0.73
CMTM3-209ENST00000565003 SLC30A4O14863 429 aa10.52□□□□□ -0.73
CMTM3-209ENST00000565003 PMM2O15305 246 aa10.52□□□□□ -0.73
CMTM3-209ENST00000565003 ZBED1O96006 694 aa10.52□□□□□ -0.73
CMTM3-209ENST00000565003 CALCAP01258 141 aa10.52□□□□□ -0.73
CMTM3-209ENST00000565003 HMBSP08397 361 aa10.52□□□□□ -0.73
CMTM3-209ENST00000565003 ZNF806P0C7X5 589 aa10.52□□□□□ -0.73
CMTM3-209ENST00000565003 VDRP11473 427 aa10.52□□□□□ -0.73
CMTM3-209ENST00000565003 CORO1AP31146 461 aaKnown RBP10.52□□□□□ -0.73
CMTM3-209ENST00000565003 SLC8A3P57103 927 aa10.52□□□□□ -0.73
CMTM3-209ENST00000565003 ADIGQ0VDE8 80 aa10.52□□□□□ -0.73
CMTM3-209ENST00000565003 PAK1Q13153 545 aa10.52□□□□□ -0.73
CMTM3-209ENST00000565003 USP39Q53GS9 565 aaKnown RBP10.52□□□□□ -0.73
CMTM3-209ENST00000565003 EGFLAMQ63HQ2 1017 aa10.52□□□□□ -0.73
CMTM3-209ENST00000565003 PMS2CLQ68D20 193 aa10.52□□□□□ -0.73
CMTM3-209ENST00000565003 PM20D1Q6GTS8 502 aa10.52□□□□□ -0.73
CMTM3-209ENST00000565003 TCEAL6Q6IPX3 200 aa10.52□□□□□ -0.73
CMTM3-209ENST00000565003 TMEM270Q6UE05 265 aa10.52□□□□□ -0.73
CMTM3-209ENST00000565003 RSRC2Q7L4I2 434 aaKnown RBP10.52□□□□□ -0.73
CMTM3-209ENST00000565003 ARHGEF19Q8IW93 802 aa10.52□□□□□ -0.73
CMTM3-209ENST00000565003 TRIM59Q8IWR1 403 aa10.52□□□□□ -0.73
CMTM3-209ENST00000565003 ARHGAP18Q8N392 663 aa10.52□□□□□ -0.73
CMTM3-209ENST00000565003 PPM1KQ8N3J5 372 aa10.52□□□□□ -0.73
CMTM3-209ENST00000565003 FRMD1Q8N878 549 aa10.52□□□□□ -0.73
CMTM3-209ENST00000565003 HMGB4Q8WW32 186 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms