RNA–Protein interactions for RNA: ENST00000564970.1

PTPN9-204, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

TSL 5

Gene PTPN9, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-204ENST00000564970 SYNJ2BP-COX16A0A087WUM0 186 aa6.49□□□□□ -1.37
PTPN9-204ENST00000564970 TLDC2A0PJX2 215 aa6.49□□□□□ -1.37
PTPN9-204ENST00000564970 TYW5A2RUC4 315 aaKnown RBP6.49□□□□□ -1.37
PTPN9-204ENST00000564970 NBPF26B4DH59 902 aa6.49□□□□□ -1.37
PTPN9-204ENST00000564970 H3BSA7 217 aa6.49□□□□□ -1.37
PTPN9-204ENST00000564970 PSMD12O00232 456 aaPredicted RBP6.49□□□□□ -1.37
PTPN9-204ENST00000564970 EEF2KO00418 725 aaKnown RBP6.49□□□□□ -1.37
PTPN9-204ENST00000564970 TXNDC9O14530 226 aa6.49□□□□□ -1.37
PTPN9-204ENST00000564970 GNB5O14775 395 aa6.49□□□□□ -1.37
PTPN9-204ENST00000564970 HDAC3O15379 428 aa6.49□□□□□ -1.37
PTPN9-204ENST00000564970 NCK2O43639 380 aa6.49□□□□□ -1.37
PTPN9-204ENST00000564970 FAM189A1O60320 539 aa6.49□□□□□ -1.37
PTPN9-204ENST00000564970 DNAJA2O60884 412 aa6.49□□□□□ -1.37
PTPN9-204ENST00000564970 PSIP1O75475 530 aaKnown RBP6.49□□□□□ -1.37
PTPN9-204ENST00000564970 SPAG6O75602 509 aa6.49□□□□□ -1.37
PTPN9-204ENST00000564970 SURF6O75683 361 aaKnown RBP6.49□□□□□ -1.37
PTPN9-204ENST00000564970 BAG2O95816 211 aa6.49□□□□□ -1.37
PTPN9-204ENST00000564970 SERPING1P05155 500 aa6.49□□□□□ -1.37
PTPN9-204ENST00000564970 GSNP06396 782 aa6.49□□□□□ -1.37
PTPN9-204ENST00000564970 NR3C2P08235 984 aa6.49□□□□□ -1.37
PTPN9-204ENST00000564970 C7P10643 843 aa6.49□□□□□ -1.37
PTPN9-204ENST00000564970 PCSK2P16519 638 aa6.49□□□□□ -1.37
PTPN9-204ENST00000564970 RRM1P23921 792 aa6.49□□□□□ -1.37
PTPN9-204ENST00000564970 RBL1P28749 1068 aa6.49□□□□□ -1.37
PTPN9-204ENST00000564970 ZNF76P36508 570 aa6.49□□□□□ -1.37
PTPN9-204ENST00000564970 GNPDA1P46926 289 aa6.49□□□□□ -1.37
PTPN9-204ENST00000564970 STT3AP46977 705 aa6.49□□□□□ -1.37
PTPN9-204ENST00000564970 SERPINB10P48595 397 aa6.49□□□□□ -1.37
PTPN9-204ENST00000564970 STARP49675 285 aa6.49□□□□□ -1.37
PTPN9-204ENST00000564970 ADCY7P51828 1080 aa6.49□□□□□ -1.37
PTPN9-204ENST00000564970 IFI35P80217 286 aaPredicted RBP6.49□□□□□ -1.37
PTPN9-204ENST00000564970 RHAGQ02094 409 aa6.49□□□□□ -1.37
PTPN9-204ENST00000564970 CTDSPL2Q05D32 466 aa6.49□□□□□ -1.37
PTPN9-204ENST00000564970 DLG1Q12959 904 aa6.49□□□□□ -1.37
PTPN9-204ENST00000564970 SLC29A2Q14542 456 aa6.49□□□□□ -1.37
PTPN9-204ENST00000564970 PKN2Q16513 984 aaKnown RBP6.49□□□□□ -1.37
PTPN9-204ENST00000564970 CYP2A13Q16696 494 aa6.49□□□□□ -1.37
PTPN9-204ENST00000564970 ASTE1Q2TB18 679 aaPredicted RBP6.49□□□□□ -1.37
PTPN9-204ENST00000564970 KIAA1755Q5JYT7 1200 aa6.49□□□□□ -1.37
PTPN9-204ENST00000564970 IRAK1BP1Q5VVH5 260 aa6.49□□□□□ -1.37
PTPN9-204ENST00000564970 CGB2Q6NT52 195 aa6.49□□□□□ -1.37
PTPN9-204ENST00000564970 RFWD3Q6PCD5 774 aa6.49□□□□□ -1.37
PTPN9-204ENST00000564970 ATG9AQ7Z3C6 839 aa6.49□□□□□ -1.37
PTPN9-204ENST00000564970 RALYLQ86SE5 291 aaKnown RBP6.49□□□□□ -1.37
PTPN9-204ENST00000564970 RALGPS2Q86X27 583 aaPredicted RBP6.49□□□□□ -1.37
PTPN9-204ENST00000564970 ANKLE2Q86XL3 938 aa6.49□□□□□ -1.37
PTPN9-204ENST00000564970 KLHL7Q8IXQ5 586 aa6.49□□□□□ -1.37
PTPN9-204ENST00000564970 ULK2Q8IYT8 1036 aa6.49□□□□□ -1.37
PTPN9-204ENST00000564970 UBE2J2Q8N2K1 259 aa6.49□□□□□ -1.37
PTPN9-204ENST00000564970 MAGEB6Q8N7X4 407 aa6.49□□□□□ -1.37
PTPN9-204ENST00000564970 C8orf58Q8NAV2 365 aa6.49□□□□□ -1.37
PTPN9-204ENST00000564970 GIMAP8Q8ND71 665 aaPredicted RBP6.49□□□□□ -1.37
PTPN9-204ENST00000564970 U2AF1L4Q8WU68 220 aaKnown RBP6.49□□□□□ -1.37
PTPN9-204ENST00000564970 RAB2BQ8WUD1 216 aa6.49□□□□□ -1.37
PTPN9-204ENST00000564970 SPOCK2Q92563 424 aa6.49□□□□□ -1.37
PTPN9-204ENST00000564970 ATP2A3Q93084 1043 aa6.49□□□□□ -1.37
PTPN9-204ENST00000564970 HES6Q96HZ4 224 aa6.49□□□□□ -1.37
PTPN9-204ENST00000564970 FAM161BQ96MY7 647 aa6.49□□□□□ -1.37
PTPN9-204ENST00000564970 CDK5RAP1Q96SZ6 601 aaKnown RBP6.49□□□□□ -1.37
PTPN9-204ENST00000564970 C9orf16Q9BUW7 83 aa6.49□□□□□ -1.37
PTPN9-204ENST00000564970 NUP85Q9BW27 656 aa6.49□□□□□ -1.37
PTPN9-204ENST00000564970 NUSAP1Q9BXS6 441 aaKnown RBP6.49□□□□□ -1.37
PTPN9-204ENST00000564970 SLC2A11Q9BYW1 496 aa6.49□□□□□ -1.37
PTPN9-204ENST00000564970 USP44Q9H0E7 712 aa6.49□□□□□ -1.37
PTPN9-204ENST00000564970 SLC6A17Q9H1V8 727 aa6.49□□□□□ -1.37
PTPN9-204ENST00000564970 TMEM245Q9H330 911 aa6.49□□□□□ -1.37
PTPN9-204ENST00000564970 FOXP1Q9H334 677 aaPredicted RBP6.49□□□□□ -1.37
PTPN9-204ENST00000564970 GPN2Q9H9Y4 310 aaPredicted RBP6.49□□□□□ -1.37
PTPN9-204ENST00000564970 SPC25Q9HBM1 224 aa6.49□□□□□ -1.37
PTPN9-204ENST00000564970 KCNK9Q9NPC2 374 aa6.49□□□□□ -1.37
PTPN9-204ENST00000564970 HOMER2Q9NSB8 354 aa6.49□□□□□ -1.37
PTPN9-204ENST00000564970 PIH1D1Q9NWS0 290 aaKnown RBP6.49□□□□□ -1.37
PTPN9-204ENST00000564970 SIRT5Q9NXA8 310 aa6.49□□□□□ -1.37
PTPN9-204ENST00000564970 MCM9Q9NXL9 1143 aa6.49□□□□□ -1.37
PTPN9-204ENST00000564970 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.49□□□□□ -1.371e-6■■□□□ 14.2
PTPN9-204ENST00000564970 PKD2L2Q9NZM6 624 aa6.49□□□□□ -1.37
PTPN9-204ENST00000564970 FETUBQ9UGM5 382 aa6.49□□□□□ -1.37
PTPN9-204ENST00000564970 PCYOX1Q9UHG3 505 aa6.49□□□□□ -1.37
PTPN9-204ENST00000564970 AMACRQ9UHK6 382 aa6.49□□□□□ -1.37
PTPN9-204ENST00000564970 GTF2IRD1Q9UHL9 959 aa6.49□□□□□ -1.37
PTPN9-204ENST00000564970 TAGLN3Q9UI15 199 aa6.49□□□□□ -1.37
PTPN9-204ENST00000564970 VPS51Q9UID3 782 aa6.49□□□□□ -1.37
PTPN9-204ENST00000564970 STRIP2Q9ULQ0 834 aa6.49□□□□□ -1.37
PTPN9-204ENST00000564970 PACSIN2Q9UNF0 486 aaPredicted RBP6.49□□□□□ -1.37
PTPN9-204ENST00000564970 WASF2Q9Y6W5 498 aa6.49□□□□□ -1.37
PTPN9-204ENST00000564970 MAU2Q9Y6X3 613 aa6.49□□□□□ -1.37
PTPN9-204ENST00000564970 PHRF1Q9P1Y6 1649 aaKnown RBP6.49□□□□□ -1.37
PTPN9-204ENST00000564970 MYH11P35749 1972 aa6.49□□□□□ -1.37
PTPN9-204ENST00000564970 SLIT3O75094 1523 aa6.49□□□□□ -1.37
PTPN9-204ENST00000564970 C10orf71Q711Q0 1435 aa6.49□□□□□ -1.37
PTPN9-204ENST00000564970 SPATA31A6Q5VVP1 1343 aa6.49□□□□□ -1.37
PTPN9-204ENST00000564970 MYH2Q9UKX2 1941 aa6.48□□□□□ -1.37
PTPN9-204ENST00000564970 NUP153P49790 1475 aaKnown RBP6.48□□□□□ -1.37
PTPN9-204ENST00000564970 METP08581 1390 aa6.48□□□□□ -1.37
PTPN9-204ENST00000564970 ZMYM2Q9UBW7 1377 aa6.48□□□□□ -1.37
PTPN9-204ENST00000564970 ZSCAN5CA6NGD5 496 aaPredicted RBP6.48□□□□□ -1.37
PTPN9-204ENST00000564970 LACTBL1A8MY62 500 aa6.48□□□□□ -1.37
PTPN9-204ENST00000564970 FAM155AB1AL88 458 aaPredicted RBP6.48□□□□□ -1.37
PTPN9-204ENST00000564970 H3BNH8 94 aa6.48□□□□□ -1.37
PTPN9-204ENST00000564970 I3L4J1 428 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms