RNA–Protein interactions for RNA: ENST00000563416.3

LINC00254-201, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 662 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-201ENST00000563416 SARAFQ96BY9 339 aa5.85□□□□□ -1.47
LINC00254-201ENST00000563416 BBC3Q96PG8 261 aaPredicted RBP5.85□□□□□ -1.47
LINC00254-201ENST00000563416 NUP62CLQ9H1M0 184 aa5.85□□□□□ -1.47
LINC00254-201ENST00000563416 PRDM13Q9H4Q3 707 aa5.85□□□□□ -1.47
LINC00254-201ENST00000563416 STK32BQ9NY57 414 aa5.85□□□□□ -1.47
LINC00254-201ENST00000563416 TRPC5Q9UL62 973 aaPredicted RBP5.85□□□□□ -1.47
LINC00254-201ENST00000563416 WNT6Q9Y6F9 365 aa5.85□□□□□ -1.47
LINC00254-201ENST00000563416 COL11A2P13942 1736 aaPredicted RBP5.85□□□□□ -1.47
LINC00254-201ENST00000563416 TMEM233B4DJY2 109 aa5.84□□□□□ -1.47
LINC00254-201ENST00000563416 QSOX1O00391 747 aa5.84□□□□□ -1.47
LINC00254-201ENST00000563416 CCP110O43303 1012 aa5.84□□□□□ -1.47
LINC00254-201ENST00000563416 PLIN1O60240 522 aa5.84□□□□□ -1.47
LINC00254-201ENST00000563416 IL6RP08887 468 aaPredicted RBP5.84□□□□□ -1.47
LINC00254-201ENST00000563416 FAM163BP0C2L3 166 aa5.84□□□□□ -1.47
LINC00254-201ENST00000563416 ELFN1P0C7U0 828 aa5.84□□□□□ -1.47
LINC00254-201ENST00000563416 KCNA3P22001 575 aa5.84□□□□□ -1.47
LINC00254-201ENST00000563416 CLCN2P51788 898 aa5.84□□□□□ -1.47
LINC00254-201ENST00000563416 ATXN1P54253 815 aaKnown RBP5.84□□□□□ -1.47
LINC00254-201ENST00000563416 PDE1AP54750 535 aa5.84□□□□□ -1.47
LINC00254-201ENST00000563416 RHBDL3P58872 404 aa5.84□□□□□ -1.47
LINC00254-201ENST00000563416 FMO1Q01740 532 aa5.84□□□□□ -1.47
LINC00254-201ENST00000563416 SEMA5AQ13591 1074 aa5.84□□□□□ -1.47
LINC00254-201ENST00000563416 HLTFQ14527 1009 aaKnown RBP eCLIP5.84□□□□□ -1.47
LINC00254-201ENST00000563416 DEPDC1Q5TB30 811 aa5.84□□□□□ -1.47
LINC00254-201ENST00000563416 SYCE2Q6PIF2 218 aa5.84□□□□□ -1.47
LINC00254-201ENST00000563416 MICU3Q86XE3 530 aa5.84□□□□□ -1.47
LINC00254-201ENST00000563416 RASAL3Q86YV0 1011 aa5.84□□□□□ -1.47
LINC00254-201ENST00000563416 SPARTQ8N0X7 666 aa5.84□□□□□ -1.47
LINC00254-201ENST00000563416 LRRC71Q8N4P6 559 aa5.84□□□□□ -1.47
LINC00254-201ENST00000563416 KCNH5Q8NCM2 988 aa5.84□□□□□ -1.47
LINC00254-201ENST00000563416 BPIFB1Q8TDL5 484 aa5.84□□□□□ -1.47
LINC00254-201ENST00000563416 IPCEF1Q8WWN9 437 aaPredicted RBP5.84□□□□□ -1.47
LINC00254-201ENST00000563416 GLG1Q92896 1179 aa5.84□□□□□ -1.47
LINC00254-201ENST00000563416 XPNPEP3Q9NQH7 507 aa5.84□□□□□ -1.47
LINC00254-201ENST00000563416 ARPP21Q9UBL0 812 aaPredicted RBP5.84□□□□□ -1.47
LINC00254-201ENST00000563416 PKD1L3Q7Z443 1732 aa5.84□□□□□ -1.47
LINC00254-201ENST00000563416 KAT6BQ8WYB5 2073 aa5.84□□□□□ -1.47
LINC00254-201ENST00000563416 NSD3Q9BZ95 1437 aa5.83□□□□□ -1.48
LINC00254-201ENST00000563416 RREB1Q92766 1687 aa5.83□□□□□ -1.48
LINC00254-201ENST00000563416 LOC102723971A0A1B0GUV8 181 aa5.83□□□□□ -1.48
LINC00254-201ENST00000563416 A1L4Q6 167 aa5.83□□□□□ -1.48
LINC00254-201ENST00000563416 FOXN3O00409 490 aaPredicted RBP5.83□□□□□ -1.48
LINC00254-201ENST00000563416 CAND2O75155 1236 aa5.83□□□□□ -1.48
LINC00254-201ENST00000563416 FESP07332 822 aa5.83□□□□□ -1.48
LINC00254-201ENST00000563416 CSF1RP07333 972 aa5.83□□□□□ -1.48
LINC00254-201ENST00000563416 DRD4P21917 467 aa5.83□□□□□ -1.48
LINC00254-201ENST00000563416 GNALP38405 381 aa5.83□□□□□ -1.48
LINC00254-201ENST00000563416 LIPAP38571 399 aa5.83□□□□□ -1.48
LINC00254-201ENST00000563416 TPTEP56180 551 aa5.83□□□□□ -1.48
LINC00254-201ENST00000563416 ZIK1Q3SY52 487 aaPredicted RBP5.83□□□□□ -1.48
LINC00254-201ENST00000563416 AARS2Q5JTZ9 985 aaKnown RBP5.83□□□□□ -1.48
LINC00254-201ENST00000563416 CERCAMQ5T4B2 595 aa5.83□□□□□ -1.48
LINC00254-201ENST00000563416 OR56A3Q8NH54 315 aa5.83□□□□□ -1.48
LINC00254-201ENST00000563416 RP9Q8TA86 221 aaKnown RBP5.83□□□□□ -1.48
LINC00254-201ENST00000563416 ZNF384Q8TF68 577 aa5.83□□□□□ -1.48
LINC00254-201ENST00000563416 TBC1D5Q92609 795 aa5.83□□□□□ -1.48
LINC00254-201ENST00000563416 PPP2R3CQ969Q6 453 aa5.83□□□□□ -1.48
LINC00254-201ENST00000563416 ZNF764Q96H86 408 aaPredicted RBP5.83□□□□□ -1.48
LINC00254-201ENST00000563416 STK31Q9BXU1 1019 aa5.83□□□□□ -1.48
LINC00254-201ENST00000563416 BTBD1Q9H0C5 482 aa5.83□□□□□ -1.48
LINC00254-201ENST00000563416 CCNL1Q9UK58 526 aaPredicted RBP5.83□□□□□ -1.48
LINC00254-201ENST00000563416 HDAC9Q9UKV0 1011 aa5.83□□□□□ -1.48
LINC00254-201ENST00000563416 ITGB4P16144 1822 aa5.83□□□□□ -1.48
LINC00254-201ENST00000563416 BLMP54132 1417 aaPredicted RBP5.82□□□□□ -1.48
LINC00254-201ENST00000563416 CRB1P82279 1406 aa5.82□□□□□ -1.48
LINC00254-201ENST00000563416 NHSQ6T4R5 1651 aa5.82□□□□□ -1.48
LINC00254-201ENST00000563416 SPATA31A5Q5VU36 1347 aa5.82□□□□□ -1.48
LINC00254-201ENST00000563416 SPATA31A7Q8IWB4 1347 aa5.82□□□□□ -1.48
LINC00254-201ENST00000563416 INMTO95050 263 aa5.82□□□□□ -1.48
LINC00254-201ENST00000563416 DLDP09622 509 aaKnown RBP5.82□□□□□ -1.48
LINC00254-201ENST00000563416 PRKAR1BP31321 381 aa5.82□□□□□ -1.48
LINC00254-201ENST00000563416 CYP2C18P33260 490 aa5.82□□□□□ -1.48
LINC00254-201ENST00000563416 RPS16P62249 146 aaKnown RBP5.82□□□□□ -1.48
LINC00254-201ENST00000563416 SP2Q02086 613 aa5.82□□□□□ -1.48
LINC00254-201ENST00000563416 BIRC2Q13490 618 aa5.82□□□□□ -1.48
LINC00254-201ENST00000563416 C3orf38Q5JPI3 329 aa5.82□□□□□ -1.48
LINC00254-201ENST00000563416 CACHD1Q5VU97 1274 aa5.82□□□□□ -1.48
LINC00254-201ENST00000563416 CEP85Q6P2H3 762 aa5.82□□□□□ -1.48
LINC00254-201ENST00000563416 SLC29A4Q7RTT9 530 aa5.82□□□□□ -1.48
LINC00254-201ENST00000563416 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.82□□□□□ -1.48
LINC00254-201ENST00000563416 YAF2Q8IY57 180 aa5.82□□□□□ -1.48
LINC00254-201ENST00000563416 IZUMO1Q8IYV9 350 aa5.82□□□□□ -1.48
LINC00254-201ENST00000563416 ABRAQ8N0Z2 381 aa5.82□□□□□ -1.48
LINC00254-201ENST00000563416 XAGE5Q8WWM1 108 aa5.82□□□□□ -1.48
LINC00254-201ENST00000563416 SOCS4Q8WXH5 440 aa5.82□□□□□ -1.48
LINC00254-201ENST00000563416 TIFAQ96CG3 184 aa5.82□□□□□ -1.48
LINC00254-201ENST00000563416 MSLNLQ96KJ4 702 aa5.82□□□□□ -1.48
LINC00254-201ENST00000563416 DPCDQ9BVM2 203 aaPredicted RBP5.82□□□□□ -1.48
LINC00254-201ENST00000563416 PADI4Q9UM07 663 aa5.82□□□□□ -1.48
LINC00254-201ENST00000563416 CDY1Q9Y6F8 540 aa5.82□□□□□ -1.48
LINC00254-201ENST00000563416 RTL1A6NKG5 1358 aa5.81□□□□□ -1.48
LINC00254-201ENST00000563416 KIF7Q2M1P5 1343 aa5.81□□□□□ -1.48
LINC00254-201ENST00000563416 SPATA31A1Q5TZJ5 1347 aa5.81□□□□□ -1.48
LINC00254-201ENST00000563416 FYB1O15117 783 aa5.81□□□□□ -1.48
LINC00254-201ENST00000563416 C1QL1O75973 258 aa5.81□□□□□ -1.48
LINC00254-201ENST00000563416 PRKCBP05771 671 aa5.81□□□□□ -1.48
LINC00254-201ENST00000563416 NPSP0C0P6 89 aa5.81□□□□□ -1.48
LINC00254-201ENST00000563416 FBLP22087 321 aaKnown RBP5.81□□□□□ -1.48
LINC00254-201ENST00000563416 ITPKBP27987 946 aa5.81□□□□□ -1.48
LINC00254-201ENST00000563416 PCSK6P29122 969 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 129.8 ms