RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 PARS2Q7L3T8 475 aaKnown RBP3.8□□□□□ -1.8
SHCBP1-202ENST00000563219 IPO4Q8TEX9 1081 aaKnown RBP3.8□□□□□ -1.8
SHCBP1-202ENST00000563219 CTHRC1Q96CG8 243 aa3.8□□□□□ -1.8
SHCBP1-202ENST00000563219 NAF1Q96HR8 494 aaKnown RBP3.8□□□□□ -1.8
SHCBP1-202ENST00000563219 WDR24Q96S15 920 aa3.8□□□□□ -1.8
SHCBP1-202ENST00000563219 MYLK2Q9H1R3 596 aa3.8□□□□□ -1.8
SHCBP1-202ENST00000563219 DLL3Q9NYJ7 618 aa3.8□□□□□ -1.8
SHCBP1-202ENST00000563219 ARPP21Q9UBL0 812 aaPredicted RBP3.8□□□□□ -1.8
SHCBP1-202ENST00000563219 LZTS1Q9Y250 596 aa3.8□□□□□ -1.8
SHCBP1-202ENST00000563219 ENTPD2Q9Y5L3 495 aa3.8□□□□□ -1.8
SHCBP1-202ENST00000563219 COL3A1P02461 1466 aaPredicted RBP3.79□□□□□ -1.8
SHCBP1-202ENST00000563219 AQP12BA6NM10 295 aa3.79□□□□□ -1.8
SHCBP1-202ENST00000563219 A8MVJ9 347 aa3.79□□□□□ -1.8
SHCBP1-202ENST00000563219 H0YIZ8 118 aa3.79□□□□□ -1.8
SHCBP1-202ENST00000563219 PSMD9O00233 223 aa3.79□□□□□ -1.8
SHCBP1-202ENST00000563219 EXOC5O00471 708 aa3.79□□□□□ -1.8
SHCBP1-202ENST00000563219 CCNT2O60583 730 aaKnown RBP3.79□□□□□ -1.8
SHCBP1-202ENST00000563219 CBFA2T3O75081 653 aa3.79□□□□□ -1.8
SHCBP1-202ENST00000563219 PMPCBO75439 489 aa3.79□□□□□ -1.8
SHCBP1-202ENST00000563219 GLP2RO95838 553 aa3.79□□□□□ -1.8
SHCBP1-202ENST00000563219 TTLL1O95922 423 aa3.79□□□□□ -1.8
SHCBP1-202ENST00000563219 PECAM1P16284 738 aaPredicted RBP3.79□□□□□ -1.8
SHCBP1-202ENST00000563219 CD53P19397 219 aa3.79□□□□□ -1.8
SHCBP1-202ENST00000563219 ITPKBP27987 946 aa3.79□□□□□ -1.8
SHCBP1-202ENST00000563219 CTGFP29279 349 aa3.79□□□□□ -1.8
SHCBP1-202ENST00000563219 NTSR1P30989 418 aa3.79□□□□□ -1.8
SHCBP1-202ENST00000563219 GRK6P43250 576 aa3.79□□□□□ -1.8
SHCBP1-202ENST00000563219 POU5F1BQ06416 359 aa3.79□□□□□ -1.8
SHCBP1-202ENST00000563219 NSUN2Q08J23 767 aaKnown RBP eCLIP3.79□□□□□ -1.8
SHCBP1-202ENST00000563219 GPS1Q13098 491 aa3.79□□□□□ -1.8
SHCBP1-202ENST00000563219 ACOX1Q15067 660 aa3.79□□□□□ -1.8
SHCBP1-202ENST00000563219 TIGD6Q17RP2 521 aa3.79□□□□□ -1.8
SHCBP1-202ENST00000563219 AARS2Q5JTZ9 985 aaKnown RBP3.79□□□□□ -1.8
SHCBP1-202ENST00000563219 AKNAD1Q5T1N1 836 aa3.79□□□□□ -1.8
SHCBP1-202ENST00000563219 TMTC4Q5T4D3 741 aa3.79□□□□□ -1.8
SHCBP1-202ENST00000563219 PAPD7Q5XG87 772 aaKnown RBP3.79□□□□□ -1.8
SHCBP1-202ENST00000563219 Q6ZWC4 215 aa3.79□□□□□ -1.8
SHCBP1-202ENST00000563219 GRASPQ7Z6J2 395 aaPredicted RBP3.79□□□□□ -1.8
SHCBP1-202ENST00000563219 GLCCI1Q86VQ1 547 aa3.79□□□□□ -1.8
SHCBP1-202ENST00000563219 SUGP1Q8IWZ8 645 aaKnown RBP3.79□□□□□ -1.8
SHCBP1-202ENST00000563219 METTL25Q8N6Q8 603 aa3.79□□□□□ -1.8
SHCBP1-202ENST00000563219 SPATA5Q8NB90 893 aa3.79□□□□□ -1.8
SHCBP1-202ENST00000563219 SUN3Q8TAQ9 357 aa3.79□□□□□ -1.8
SHCBP1-202ENST00000563219 PNISRQ8TF01 805 aaKnown RBP3.79□□□□□ -1.8
SHCBP1-202ENST00000563219 ABHD5Q8WTS1 349 aa3.79□□□□□ -1.8
SHCBP1-202ENST00000563219 XAGE5Q8WWM1 108 aa3.79□□□□□ -1.8
SHCBP1-202ENST00000563219 TBC1D5Q92609 795 aa3.79□□□□□ -1.8
SHCBP1-202ENST00000563219 LTV1Q96GA3 475 aaPredicted RBP3.79□□□□□ -1.8
SHCBP1-202ENST00000563219 WDYHV1Q96HA8 205 aa3.79□□□□□ -1.8
SHCBP1-202ENST00000563219 UROC1Q96N76 676 aa3.79□□□□□ -1.8
SHCBP1-202ENST00000563219 PRR25Q96S07 402 aa3.79□□□□□ -1.8
SHCBP1-202ENST00000563219 HAPLN3Q96S86 360 aa3.79□□□□□ -1.8
SHCBP1-202ENST00000563219 THAP7Q9BT49 309 aaPredicted RBP3.79□□□□□ -1.8
SHCBP1-202ENST00000563219 SORBS1Q9BX66 1292 aaKnown RBP3.79□□□□□ -1.8
SHCBP1-202ENST00000563219 FSD1LQ9BXM9 530 aa3.79□□□□□ -1.8
SHCBP1-202ENST00000563219 WDR26Q9H7D7 661 aa3.79□□□□□ -1.8
SHCBP1-202ENST00000563219 OBP2BQ9NPH6 170 aa3.79□□□□□ -1.8
SHCBP1-202ENST00000563219 ITM2CQ9NQX7 267 aa3.79□□□□□ -1.8
SHCBP1-202ENST00000563219 IL17RBQ9NRM6 502 aa3.79□□□□□ -1.8
SHCBP1-202ENST00000563219 DUSP22Q9NRW4 184 aa3.79□□□□□ -1.8
SHCBP1-202ENST00000563219 ASB6Q9NWX5 421 aa3.79□□□□□ -1.8
SHCBP1-202ENST00000563219 RRN3Q9NYV6 651 aa3.79□□□□□ -1.8
SHCBP1-202ENST00000563219 IGSF9Q9P2J2 1179 aa3.79□□□□□ -1.8
SHCBP1-202ENST00000563219 STEAP1Q9UHE8 339 aa3.79□□□□□ -1.8
SHCBP1-202ENST00000563219 GTF2A1LQ9UNN4 478 aa3.79□□□□□ -1.8
SHCBP1-202ENST00000563219 SLC27A6Q9Y2P4 619 aa3.79□□□□□ -1.8
SHCBP1-202ENST00000563219 DTNAQ9Y4J8 743 aa3.79□□□□□ -1.8
SHCBP1-202ENST00000563219 LGALS16A8MUM7 142 aa3.78□□□□□ -1.8
SHCBP1-202ENST00000563219 DHHO43323 396 aa3.78□□□□□ -1.8
SHCBP1-202ENST00000563219 SPRY2O43597 315 aa3.78□□□□□ -1.8
SHCBP1-202ENST00000563219 SKAP2O75563 359 aaPredicted RBP3.78□□□□□ -1.8
SHCBP1-202ENST00000563219 TNFRSF6BO95407 300 aa3.78□□□□□ -1.8
SHCBP1-202ENST00000563219 NTSR2O95665 410 aa3.78□□□□□ -1.8
SHCBP1-202ENST00000563219 CSTBP04080 98 aaKnown RBP3.78□□□□□ -1.8
SHCBP1-202ENST00000563219 NDUFB7P17568 137 aa3.78□□□□□ -1.8
SHCBP1-202ENST00000563219 WT1P19544 449 aaPredicted RBP3.78□□□□□ -1.8
SHCBP1-202ENST00000563219 DRD4P21917 467 aa3.78□□□□□ -1.8
SHCBP1-202ENST00000563219 PDE1AP54750 535 aa3.78□□□□□ -1.8
SHCBP1-202ENST00000563219 SOX10P56693 466 aa3.78□□□□□ -1.8
SHCBP1-202ENST00000563219 SUMO2P61956 95 aaKnown RBP3.78□□□□□ -1.8
SHCBP1-202ENST00000563219 E2F1Q01094 437 aa3.78□□□□□ -1.8
SHCBP1-202ENST00000563219 GALNT1Q10472 559 aaPredicted RBP3.78□□□□□ -1.8
SHCBP1-202ENST00000563219 PTK2BQ14289 1009 aa3.78□□□□□ -1.8
SHCBP1-202ENST00000563219 SPARCL1Q14515 664 aa3.78□□□□□ -1.8
SHCBP1-202ENST00000563219 ST3GAL2Q16842 350 aa3.78□□□□□ -1.8
SHCBP1-202ENST00000563219 PFKFB4Q16877 469 aa3.78□□□□□ -1.8
SHCBP1-202ENST00000563219 TRIM71Q2Q1W2 868 aaKnown RBP3.78□□□□□ -1.8
SHCBP1-202ENST00000563219 TBC1D25Q3MII6 688 aa3.78□□□□□ -1.8
SHCBP1-202ENST00000563219 ALFQ53S48 1182 aa3.78□□□□□ -1.8
SHCBP1-202ENST00000563219 CLEC9AQ6UXN8 241 aa3.78□□□□□ -1.8
SHCBP1-202ENST00000563219 CLASRPQ8N2M8 674 aaKnown RBP3.78□□□□□ -1.8
SHCBP1-202ENST00000563219 LRRC71Q8N4P6 559 aa3.78□□□□□ -1.8
SHCBP1-202ENST00000563219 TBC1D20Q96BZ9 403 aa3.78□□□□□ -1.8
SHCBP1-202ENST00000563219 NUDT22Q9BRQ3 303 aa3.78□□□□□ -1.8
SHCBP1-202ENST00000563219 DPCDQ9BVM2 203 aaPredicted RBP3.78□□□□□ -1.8
SHCBP1-202ENST00000563219 MAF1Q9H063 256 aa3.78□□□□□ -1.8
SHCBP1-202ENST00000563219 TMX4Q9H1E5 349 aaPredicted RBP3.78□□□□□ -1.8
SHCBP1-202ENST00000563219 VPS45Q9NRW7 570 aa3.78□□□□□ -1.8
SHCBP1-202ENST00000563219 HELLSQ9NRZ9 838 aa3.78□□□□□ -1.8
SHCBP1-202ENST00000563219 RXFP3Q9NSD7 469 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms