RNA–Protein interactions for RNA: ENST00000562540.1

DENND4A-205, Transcript of DENN domain containing 4A, humanhuman

TSL 2

Gene DENND4A, Length 629 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4A-205ENST00000562540 LRTOMTQ8WZ04 291 aa3.76□□□□□ -1.81
DENND4A-205ENST00000562540 RAPGEF4Q8WZA2 1011 aa3.76□□□□□ -1.81
DENND4A-205ENST00000562540 P2RX7Q99572 595 aaKnown RBP3.76□□□□□ -1.81
DENND4A-205ENST00000562540 C22orf23Q9BZE7 217 aa3.76□□□□□ -1.81
DENND4A-205ENST00000562540 MS4A7Q9GZW8 240 aaPredicted RBP3.76□□□□□ -1.81
DENND4A-205ENST00000562540 GEMIN8Q9NWZ8 242 aaKnown RBP3.76□□□□□ -1.81
DENND4A-205ENST00000562540 KRTAP9-6A8MVA2 160 aa3.75□□□□□ -1.81
DENND4A-205ENST00000562540 GOLIM4O00461 696 aa3.75□□□□□ -1.81
DENND4A-205ENST00000562540 FRS3O43559 492 aa3.75□□□□□ -1.81
DENND4A-205ENST00000562540 PRC1O43663 620 aa3.75□□□□□ -1.81
DENND4A-205ENST00000562540 TMPRSS11DO60235 418 aa3.75□□□□□ -1.81
DENND4A-205ENST00000562540 SYF2O95926 243 aaKnown RBP3.75□□□□□ -1.81
DENND4A-205ENST00000562540 HRGP04196 525 aa3.75□□□□□ -1.81
DENND4A-205ENST00000562540 BRAFP15056 766 aa3.75□□□□□ -1.81
DENND4A-205ENST00000562540 TACR3P29371 465 aa3.75□□□□□ -1.81
DENND4A-205ENST00000562540 CDC25AP30304 524 aa3.75□□□□□ -1.81
DENND4A-205ENST00000562540 GNALP38405 381 aa3.75□□□□□ -1.81
DENND4A-205ENST00000562540 TBX4P57082 545 aa3.75□□□□□ -1.81
DENND4A-205ENST00000562540 ZXDBP98169 803 aa3.75□□□□□ -1.81
DENND4A-205ENST00000562540 HLTFQ14527 1009 aaKnown RBP eCLIP3.75□□□□□ -1.81
DENND4A-205ENST00000562540 PTCHD3Q3KNS1 767 aa3.75□□□□□ -1.81
DENND4A-205ENST00000562540 RNF220Q5VTB9 566 aa3.75□□□□□ -1.81
DENND4A-205ENST00000562540 APOA5Q6Q788 366 aa3.75□□□□□ -1.81
DENND4A-205ENST00000562540 UBE2Q1Q7Z7E8 422 aa3.75□□□□□ -1.81
DENND4A-205ENST00000562540 B4GALNT2Q8NHY0 566 aa3.75□□□□□ -1.81
DENND4A-205ENST00000562540 IL31RAQ8NI17 732 aa3.75□□□□□ -1.81
DENND4A-205ENST00000562540 KBTBD7Q8WVZ9 684 aa3.75□□□□□ -1.81
DENND4A-205ENST00000562540 IGFBPL1Q8WX77 278 aa3.75□□□□□ -1.81
DENND4A-205ENST00000562540 SLC25A28Q96A46 364 aa3.75□□□□□ -1.81
DENND4A-205ENST00000562540 MRGPRX1Q96LB2 322 aa3.75□□□□□ -1.81
DENND4A-205ENST00000562540 TMEM204Q9BSN7 226 aa3.75□□□□□ -1.81
DENND4A-205ENST00000562540 TRIM54Q9BYV2 358 aa3.75□□□□□ -1.81
DENND4A-205ENST00000562540 LRRC27Q9C0I9 530 aa3.75□□□□□ -1.81
DENND4A-205ENST00000562540 ATP6V0A4Q9HBG4 840 aa3.75□□□□□ -1.81
DENND4A-205ENST00000562540 SEMA4BQ9NPR2 832 aaPredicted RBP3.75□□□□□ -1.81
DENND4A-205ENST00000562540 GAR1Q9NY12 217 aaKnown RBP3.75□□□□□ -1.81
DENND4A-205ENST00000562540 MGAT4CQ9UBM8 478 aa3.75□□□□□ -1.81
DENND4A-205ENST00000562540 TPCN1Q9ULQ1 816 aa3.75□□□□□ -1.81
DENND4A-205ENST00000562540 L1RE1Q9UN81 338 aa3.75□□□□□ -1.81
DENND4A-205ENST00000562540 PAXBP1Q9Y5B6 917 aa3.75□□□□□ -1.81
DENND4A-205ENST00000562540 PCDHGB6Q9Y5F9 930 aa3.75□□□□□ -1.81
DENND4A-205ENST00000562540 SPRY2O43597 315 aa3.74□□□□□ -1.81
DENND4A-205ENST00000562540 SLC28A2O43868 658 aa3.74□□□□□ -1.81
DENND4A-205ENST00000562540 NGFRP08138 427 aa3.74□□□□□ -1.81
DENND4A-205ENST00000562540 ATF7P17544 494 aaPredicted RBP3.74□□□□□ -1.81
DENND4A-205ENST00000562540 EN2P19622 333 aaPredicted RBP3.74□□□□□ -1.81
DENND4A-205ENST00000562540 EPHA3P29320 983 aa3.74□□□□□ -1.81
DENND4A-205ENST00000562540 SLC13A2Q13183 592 aa3.74□□□□□ -1.81
DENND4A-205ENST00000562540 SLC14A1Q13336 389 aa3.74□□□□□ -1.81
DENND4A-205ENST00000562540 RAB32Q13637 225 aa3.74□□□□□ -1.81
DENND4A-205ENST00000562540 GALEQ14376 348 aa3.74□□□□□ -1.81
DENND4A-205ENST00000562540 MFSD13AQ14CX5 517 aa3.74□□□□□ -1.81
DENND4A-205ENST00000562540 PRTGQ2VWP7 1150 aa3.74□□□□□ -1.81
DENND4A-205ENST00000562540 MANEAQ5SRI9 462 aa3.74□□□□□ -1.81
DENND4A-205ENST00000562540 DCAF12L1Q5VU92 463 aa3.74□□□□□ -1.81
DENND4A-205ENST00000562540 MPP5Q8N3R9 675 aa3.74□□□□□ -1.81
DENND4A-205ENST00000562540 DNAJB14Q8TBM8 379 aa3.74□□□□□ -1.81
DENND4A-205ENST00000562540 CTHRC1Q96CG8 243 aa3.74□□□□□ -1.81
DENND4A-205ENST00000562540 SUCLG2Q96I99 432 aa3.74□□□□□ -1.81
DENND4A-205ENST00000562540 HIC2Q96JB3 615 aa3.74□□□□□ -1.81
DENND4A-205ENST00000562540 ZNF479Q96JC4 524 aa3.74□□□□□ -1.81
DENND4A-205ENST00000562540 VN1R3Q9BXE9 311 aa3.74□□□□□ -1.81
DENND4A-205ENST00000562540 CAMSAP3Q9P1Y5 1249 aaPredicted RBP3.74□□□□□ -1.81
DENND4A-205ENST00000562540 OGDHLQ9ULD0 1010 aa3.74□□□□□ -1.81
DENND4A-205ENST00000562540 FAM50BQ9Y247 325 aa3.74□□□□□ -1.81
DENND4A-205ENST00000562540 CLIC1O00299 241 aa3.73□□□□□ -1.81
DENND4A-205ENST00000562540 FOXN3O00409 490 aaPredicted RBP3.73□□□□□ -1.81
DENND4A-205ENST00000562540 TBX3O15119 743 aa3.73□□□□□ -1.81
DENND4A-205ENST00000562540 INPPL1O15357 1258 aa3.73□□□□□ -1.81
DENND4A-205ENST00000562540 TBC1D4O60343 1298 aa3.73□□□□□ -1.81
DENND4A-205ENST00000562540 SRGAP2O75044 1071 aa3.73□□□□□ -1.81
DENND4A-205ENST00000562540 CAND2O75155 1236 aa3.73□□□□□ -1.81
DENND4A-205ENST00000562540 KRT18P05783 430 aaKnown RBP3.73□□□□□ -1.81
DENND4A-205ENST00000562540 ARFIP2P53365 341 aa3.73□□□□□ -1.81
DENND4A-205ENST00000562540 B4GALNT1Q00973 533 aa3.73□□□□□ -1.81
DENND4A-205ENST00000562540 CFHR3Q02985 330 aa3.73□□□□□ -1.81
DENND4A-205ENST00000562540 SEMA5AQ13591 1074 aa3.73□□□□□ -1.81
DENND4A-205ENST00000562540 ASIC2Q16515 512 aa3.73□□□□□ -1.81
DENND4A-205ENST00000562540 CCSAPQ6IQ19 270 aaPredicted RBP3.73□□□□□ -1.81
DENND4A-205ENST00000562540 KSR2Q6VAB6 950 aa3.73□□□□□ -1.81
DENND4A-205ENST00000562540 NOL8Q76FK4 1167 aaKnown RBP3.73□□□□□ -1.81
DENND4A-205ENST00000562540 ASB5Q8WWX0 329 aa3.73□□□□□ -1.81
DENND4A-205ENST00000562540 SCNM1Q9BWG6 230 aa3.73□□□□□ -1.81
DENND4A-205ENST00000562540 TMEM8AQ9HCN3 771 aa3.73□□□□□ -1.81
DENND4A-205ENST00000562540 TTBK1Q5TCY1 1321 aaPredicted RBP3.72□□□□□ -1.81
DENND4A-205ENST00000562540 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.72□□□□□ -1.81
DENND4A-205ENST00000562540 ISM1B1AKI9 464 aa3.72□□□□□ -1.81
DENND4A-205ENST00000562540 BTN3A1O00481 513 aa3.72□□□□□ -1.81
DENND4A-205ENST00000562540 PQBP1O60828 265 aaKnown RBP3.72□□□□□ -1.81
DENND4A-205ENST00000562540 MAP4K4O95819 1239 aaPredicted RBP3.72□□□□□ -1.81
DENND4A-205ENST00000562540 MYL1P05976 194 aa3.72□□□□□ -1.81
DENND4A-205ENST00000562540 CD63P08962 238 aa3.72□□□□□ -1.81
DENND4A-205ENST00000562540 UQCRC1P31930 480 aa3.72□□□□□ -1.81
DENND4A-205ENST00000562540 IL6STP40189 918 aaPredicted RBP3.72□□□□□ -1.81
DENND4A-205ENST00000562540 SUMO3P55854 103 aaPredicted RBP3.72□□□□□ -1.81
DENND4A-205ENST00000562540 TIRAPP58753 221 aa3.72□□□□□ -1.81
DENND4A-205ENST00000562540 SAFBQ15424 915 aaKnown RBP eCLIP3.72□□□□□ -1.81
DENND4A-205ENST00000562540 PFKFB3Q16875 520 aaPredicted RBP3.72□□□□□ -1.81
DENND4A-205ENST00000562540 COBLL1Q53SF7 1204 aa3.72□□□□□ -1.81
DENND4A-205ENST00000562540 B4GALNT4Q76KP1 1039 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms