RNA–Protein interactions for RNA: ENST00000560679.1

TPM1-225, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-225ENST00000560679 PDZD8Q8NEN9 1154 aa10.5□□□□□ -0.73
TPM1-225ENST00000560679 CADM4Q8NFZ8 388 aa10.5□□□□□ -0.73
TPM1-225ENST00000560679 RHBDD1Q8TEB9 315 aa10.5□□□□□ -0.73
TPM1-225ENST00000560679 SCFD1Q8WVM8 642 aa10.5□□□□□ -0.73
TPM1-225ENST00000560679 DNAJC19Q96DA6 116 aa10.5□□□□□ -0.73
TPM1-225ENST00000560679 ANKRD36BP1Q96IX9 119 aa10.5□□□□□ -0.73
TPM1-225ENST00000560679 ACCSQ96QU6 501 aa10.5□□□□□ -0.73
TPM1-225ENST00000560679 KCNK16Q96T55 309 aa10.5□□□□□ -0.73
TPM1-225ENST00000560679 PCIF1Q9H4Z3 704 aa10.5□□□□□ -0.73
TPM1-225ENST00000560679 MRPL44Q9H9J2 332 aaKnown RBP10.5□□□□□ -0.73
TPM1-225ENST00000560679 ITM2CQ9NQX7 267 aa10.5□□□□□ -0.73
TPM1-225ENST00000560679 IL37Q9NZH6 218 aa10.5□□□□□ -0.73
TPM1-225ENST00000560679 CHORDC1Q9UHD1 332 aaPredicted RBP10.5□□□□□ -0.73
TPM1-225ENST00000560679 EIF2B4Q9UI10 523 aaKnown RBP10.5□□□□□ -0.73
TPM1-225ENST00000560679 STON1Q9Y6Q2 735 aa10.5□□□□□ -0.73
TPM1-225ENST00000560679 COL5A1P20908 1838 aaPredicted RBP10.49□□□□□ -0.73
TPM1-225ENST00000560679 METTL12A8MUP2 240 aa10.49□□□□□ -0.73
TPM1-225ENST00000560679 TNFSF14O43557 240 aa10.49□□□□□ -0.73
TPM1-225ENST00000560679 TACC1O75410 805 aa10.49□□□□□ -0.73
TPM1-225ENST00000560679 RTN3O95197 1032 aaPredicted RBP10.49□□□□□ -0.73
TPM1-225ENST00000560679 GCNT3O95395 438 aa10.49□□□□□ -0.73
TPM1-225ENST00000560679 TBX18O95935 607 aa10.49□□□□□ -0.73
TPM1-225ENST00000560679 LDHAP00338 332 aaKnown RBP10.49□□□□□ -0.73
TPM1-225ENST00000560679 GNL1P36915 607 aaPredicted RBP10.49□□□□□ -0.73
TPM1-225ENST00000560679 EIF2S3P41091 472 aaKnown RBP10.49□□□□□ -0.73
TPM1-225ENST00000560679 IL12RB1P42701 662 aa10.49□□□□□ -0.73
TPM1-225ENST00000560679 DGKGP49619 791 aa10.49□□□□□ -0.73
TPM1-225ENST00000560679 CSNK1EP49674 416 aaKnown RBP10.49□□□□□ -0.73
TPM1-225ENST00000560679 COPAP53621 1224 aa10.49□□□□□ -0.73
TPM1-225ENST00000560679 ENPP2Q13822 863 aa10.49□□□□□ -0.73
TPM1-225ENST00000560679 KIF19Q2TAC6 998 aa10.49□□□□□ -0.73
TPM1-225ENST00000560679 TPGS1Q6ZTW0 290 aa10.49□□□□□ -0.73
TPM1-225ENST00000560679 PAQR9Q6ZVX9 377 aa10.49□□□□□ -0.73
TPM1-225ENST00000560679 HTR3DQ70Z44 454 aa10.49□□□□□ -0.73
TPM1-225ENST00000560679 FAM35AQ86V20 835 aa10.49□□□□□ -0.73
TPM1-225ENST00000560679 CACUL1Q86Y37 369 aa10.49□□□□□ -0.73
TPM1-225ENST00000560679 CBWD2Q8IUF1 395 aa10.49□□□□□ -0.73
TPM1-225ENST00000560679 KRI1Q8N9T8 703 aaKnown RBP10.49□□□□□ -0.73
TPM1-225ENST00000560679 B3GALNT2Q8NCR0 500 aa10.49□□□□□ -0.73
TPM1-225ENST00000560679 NOC3LQ8WTT2 800 aaKnown RBP10.49□□□□□ -0.73
TPM1-225ENST00000560679 MMS19Q96T76 1030 aa10.49□□□□□ -0.73
TPM1-225ENST00000560679 KLF16Q9BXK1 252 aaPredicted RBP10.49□□□□□ -0.73
TPM1-225ENST00000560679 SNX25Q9H3E2 840 aa10.49□□□□□ -0.73
TPM1-225ENST00000560679 SEL1LQ9UBV2 794 aa10.49□□□□□ -0.73
TPM1-225ENST00000560679 EXOC7Q9UPT5 735 aa10.49□□□□□ -0.73
TPM1-225ENST00000560679 SNX11Q9Y5W9 270 aa10.49□□□□□ -0.73
TPM1-225ENST00000560679 E9PAM4 449 aa10.48□□□□□ -0.73
TPM1-225ENST00000560679 TLR5O60602 858 aa10.48□□□□□ -0.73
TPM1-225ENST00000560679 TNNC2P02585 160 aa10.48□□□□□ -0.73
TPM1-225ENST00000560679 HLA-EP13747 358 aa10.48□□□□□ -0.73
TPM1-225ENST00000560679 GRK6P43250 576 aa10.48□□□□□ -0.73
TPM1-225ENST00000560679 CCDC157Q569K6 752 aa10.48□□□□□ -0.73
TPM1-225ENST00000560679 KCNT1Q5JUK3 1230 aa10.48□□□□□ -0.73
TPM1-225ENST00000560679 Q6ZNB5 142 aa10.48□□□□□ -0.73
TPM1-225ENST00000560679 USP49Q70CQ1 688 aa10.48□□□□□ -0.73
TPM1-225ENST00000560679 ZNF605Q86T29 641 aa10.48□□□□□ -0.73
TPM1-225ENST00000560679 GPD1LQ8N335 351 aa10.48□□□□□ -0.73
TPM1-225ENST00000560679 ZMIZ2Q8NF64 920 aa10.48□□□□□ -0.73
TPM1-225ENST00000560679 OR6B3Q8NGW1 331 aa10.48□□□□□ -0.73
TPM1-225ENST00000560679 BHMTQ93088 406 aa10.48□□□□□ -0.73
TPM1-225ENST00000560679 NXPE2Q96DL1 559 aa10.48□□□□□ -0.73
TPM1-225ENST00000560679 FCRL3Q96P31 734 aaPredicted RBP10.48□□□□□ -0.73
TPM1-225ENST00000560679 XPO6Q96QU8 1125 aaKnown RBP10.48□□□□□ -0.73
TPM1-225ENST00000560679 OLFML3Q9NRN5 406 aa10.48□□□□□ -0.73
TPM1-225ENST00000560679 OSER1Q9NX31 292 aa10.48□□□□□ -0.73
TPM1-225ENST00000560679 PLK2Q9NYY3 685 aa10.48□□□□□ -0.73
TPM1-225ENST00000560679 WDR35Q9P2L0 1181 aa10.48□□□□□ -0.73
TPM1-225ENST00000560679 FBXO10Q9UK96 956 aa10.48□□□□□ -0.73
TPM1-225ENST00000560679 MYH10P35580 1976 aa10.48□□□□□ -0.73
TPM1-225ENST00000560679 FRMD3A2A2Y4 597 aa10.47□□□□□ -0.73
TPM1-225ENST00000560679 KCNK3O14649 394 aa10.47□□□□□ -0.73
TPM1-225ENST00000560679 CST3P01034 146 aaPredicted RBP10.47□□□□□ -0.73
TPM1-225ENST00000560679 ACO1P21399 889 aaKnown RBP10.47□□□□□ -0.73
TPM1-225ENST00000560679 PRKCHP24723 683 aa10.47□□□□□ -0.73
TPM1-225ENST00000560679 LONP1P36776 959 aaKnown RBP10.47□□□□□ -0.73
TPM1-225ENST00000560679 AFF3P51826 1226 aaKnown RBP10.47□□□□□ -0.73
TPM1-225ENST00000560679 MFAP3P55082 362 aa10.47□□□□□ -0.73
TPM1-225ENST00000560679 IL9RQ01113 521 aa10.47□□□□□ -0.73
TPM1-225ENST00000560679 STARD3Q14849 445 aa10.47□□□□□ -0.73
TPM1-225ENST00000560679 GEN1Q17RS7 908 aa10.47□□□□□ -0.73
TPM1-225ENST00000560679 DUOXA2Q1HG44 320 aa10.47□□□□□ -0.73
TPM1-225ENST00000560679 TRAPPC11Q7Z392 1133 aa10.47□□□□□ -0.73
TPM1-225ENST00000560679 TMPRSS6Q8IU80 811 aa10.47□□□□□ -0.73
TPM1-225ENST00000560679 WDR49Q8IV35 697 aa10.47□□□□□ -0.73
TPM1-225ENST00000560679 RBBP8NLQ8NC74 664 aaPredicted RBP10.47□□□□□ -0.73
TPM1-225ENST00000560679 LSM14AQ8ND56 463 aaKnown RBP10.47□□□□□ -0.73
TPM1-225ENST00000560679 RASSF8Q8NHQ8 419 aa10.47□□□□□ -0.73
TPM1-225ENST00000560679 SNX19Q92543 992 aa10.47□□□□□ -0.73
TPM1-225ENST00000560679 SIPA1Q96FS4 1042 aa10.47□□□□□ -0.73
TPM1-225ENST00000560679 ZSCAN31Q96LW9 406 aaPredicted RBP10.47□□□□□ -0.73
TPM1-225ENST00000560679 GZF1Q9H116 711 aaPredicted RBP10.47□□□□□ -0.73
TPM1-225ENST00000560679 C6orf106Q9H6K1 298 aaPredicted RBP10.47□□□□□ -0.73
TPM1-225ENST00000560679 SMYD3Q9H7B4 428 aa10.47□□□□□ -0.73
TPM1-225ENST00000560679 TM9SF3Q9HD45 589 aa10.47□□□□□ -0.73
TPM1-225ENST00000560679 DMAP1Q9NPF5 467 aaPredicted RBP10.47□□□□□ -0.73
TPM1-225ENST00000560679 FOXD4L1Q9NU39 408 aa10.47□□□□□ -0.73
TPM1-225ENST00000560679 THAP10Q9P2Z0 257 aaPredicted RBP10.47□□□□□ -0.73
TPM1-225ENST00000560679 PLXNA2O75051 1894 aa10.47□□□□□ -0.73
TPM1-225ENST00000560679 A8MXQ7 604 aa10.46□□□□□ -0.73
TPM1-225ENST00000560679 H0Y8X5 98 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms